| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ent638_2872 |
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| Symbol | mnmC |
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| ID | 5111417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Enterobacter sp. 638 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009436 |
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| Strand | + |
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| Start bp | 3109605 |
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| End bp | 3111605 |
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| Gene Length | 2001 bp |
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| Protein Length | 666 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640493060 |
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| Product | 5-methylaminomethyl-2-thiouridine methyltransferase |
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| Protein accession | YP_001177588 |
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| Protein GI | 162286710 |
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| COG category | [E] Amino acid transport and metabolism
[S] Function unknown |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating)
[COG4121] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR03197] tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.715577 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0703666 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAACAAA ACGTCGTACA ACCCGCTAAC CTTGAGTTCA ACGCTGAGGG TACACCTGTT
TCCCGAGATT TCGACGATGT CTATTTCTCT AATGATAACG GGCTGGAAGA GACCCGTTAT
GTTTTTCTGG AGGGAAACCA CCTCAACGCG CGCTTCCCCC TCCATCCCCG CAGCCAGTTT
GTCGTGGCGG AGAGCGGTTT TGGCACCGGT TTAAACTTCC TCACCCTCTG GCAGGCGTTT
GACCAGTTCC GCGCTGACCA CCCCGAGGCT ACGCTACAAA GATTACATTT CATCAGTTTT
GAGAAATATC CGCTCATCGG TCACGATCTC AAACTGGCGC ATCAGCATTG GCCAGAACTG
GCACAGTGGG CAGAACAATT ACAGGCACAA TGGCCGTTGC CACTCGGTGG ATGCCACCGC
CTGTTACTTG ATGAAGGCAG AGTGACACTC GATTTGTGGT TCGGGGATAT CAATGAACTG
ACCGACCAAC TCGACGACTC TCTCAATCAA AAGGTCGACG CCTGGTTTTT AGATGGTTTT
GCGCCGGCCA AAAATCCGGA CATGTGGAGC GAGCATTTAT TCGCTGCCAT GGCGCGTCTG
GCTCGCCCCG GTGCAACTTT GGCAACATTT ACCTGCGCCG GATTTGTGCG TCGCGGTTTG
CAGGATGCCG GTTTTACCAT GCAAAAATGC AAAGGTTTTG GCCGCAAGCG CGAAATGCTG
ACGGGCGTCA TGGCGCAGGA CAATGCCCTT CCCGCCCGCG CCCCCTGGTT TGCGCGCAGC
GGCCTTGAAA ACCGTGAAAC GGCGATTATT GGTGGCGGCA TTGCCAGCGC ACTGCTTGCC
TTCGCATTAC TTCAGCGCGG CTGGCGCGTG ACGCTCTACT GCGCCGACAA ATCACCGGCA
AATGGCGCAT CCGGCAACCG TCAGGGCGCG TTGTATCCTC TTCTGAGCGC TCACGACCCG
GCAATCAGTC AGTTTTTCCC AGCGGCATTT ACCTTTGCTC GTCGCCTCTA TGACGCCCTT
CCCGTGACCT ATGCACACGA CTGGTGCGGC GTGACGCAGC TTGGCTGGGA TGAAAAAAGC
CAACAAAAAA TAGACCAGAT GCTGTCACTG GGTTTACCGG AGCAAATCGC TGCGGCGGTT
GATGCGCAGC AGATTCTGGA CAATACCGGT CTGCCAACCG ACTGCGGTGG CATTCGCTAT
CCTGAAGGCG GCTGGTTATG CCCGGCTGAA CTGACCGCCG CGGTGATAAA CCTGGCGCAG
TCCCGCGGGC TGGCTGTGCA CTACGGCTAT CACCTGGACT CTTTGAATCA TCAGCAAGGT
GACTGGCAAT TGCGGTTCAA CAATGGCGCT GATGCCCAGC ACTCAAGCGT TGTACTGGCT
AACGGCCATC GCATCAGCGA CTTTTCGCAA ACAGAAAAGT TACCCGTTTA TCCGGTTGGC
GGTCAGGTCA GTCACATTCC CACGACCCCG CAGCTCGAAA AACTCCGTCA GGTGCTGTGT
TATGACGGCT ATTTAACGCC GCAAAACCCG GAAAATGGTC ATCATTGCAT AGGCGCTAGC
TATCATCGCG GCCAGACAGA AATGCACTAC AGCGAGGCCG ATCAGCAGCA AAATCGTCAG
CGTTTAGTGG ATTGCTTCCC GAAGGCCGAA TGGGCAAAAG AGGTCGATGT TTCTGACTCC
GATGCCCGCT GTGGCGTGCG GTGCGCGACG CGCGATCACT TGCCGATGGT CGGTAATGTG
CCGGATTACG AATCGACGCT GACGGAATAT CAAAATCTTG CCGAGAACAC CGAAACAGCG
GTCACGGCAC CGGTATATCC AGGTCTCTTT ATGCTGGGCG CGCTGGGGTC ACGCGGCTTG
TGTACTGCCC CGCTGCTGGC AGAAATTCTG GCATCACAAA TGAGCGAAGA GCCGATTCCG
ATGGACAGTA CGACGCTTGC GGGTCTGAGT CCGAATCGTT TGTGGGTACG GAAATTACTG
AAAGGGAAAG CGGTGAAATA A
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| Protein sequence | MKQNVVQPAN LEFNAEGTPV SRDFDDVYFS NDNGLEETRY VFLEGNHLNA RFPLHPRSQF
VVAESGFGTG LNFLTLWQAF DQFRADHPEA TLQRLHFISF EKYPLIGHDL KLAHQHWPEL
AQWAEQLQAQ WPLPLGGCHR LLLDEGRVTL DLWFGDINEL TDQLDDSLNQ KVDAWFLDGF
APAKNPDMWS EHLFAAMARL ARPGATLATF TCAGFVRRGL QDAGFTMQKC KGFGRKREML
TGVMAQDNAL PARAPWFARS GLENRETAII GGGIASALLA FALLQRGWRV TLYCADKSPA
NGASGNRQGA LYPLLSAHDP AISQFFPAAF TFARRLYDAL PVTYAHDWCG VTQLGWDEKS
QQKIDQMLSL GLPEQIAAAV DAQQILDNTG LPTDCGGIRY PEGGWLCPAE LTAAVINLAQ
SRGLAVHYGY HLDSLNHQQG DWQLRFNNGA DAQHSSVVLA NGHRISDFSQ TEKLPVYPVG
GQVSHIPTTP QLEKLRQVLC YDGYLTPQNP ENGHHCIGAS YHRGQTEMHY SEADQQQNRQ
RLVDCFPKAE WAKEVDVSDS DARCGVRCAT RDHLPMVGNV PDYESTLTEY QNLAENTETA
VTAPVYPGLF MLGALGSRGL CTAPLLAEIL ASQMSEEPIP MDSTTLAGLS PNRLWVRKLL
KGKAVK
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