| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1964 |
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| Symbol | |
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| ID | 4784750 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 2102353 |
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| End bp | 2104314 |
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| Gene Length | 1962 bp |
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| Protein Length | 653 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640090534 |
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| Product | hypothetical protein |
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| Protein accession | YP_001021157 |
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| Protein GI | 124267153 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4121] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR03197] tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.117707 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACGG CGCCGATCAC GCCAGGCCGC CTGGCCTTCT CACCCGACGG CGTGCCGCTG
GCGCCGGAGT TCGGCGATGT CTACCACCCG GCGGCGGGCG CGCTGCAGCA GGCGCACCAC
GTCTTCCTCG GCGGTAACCG GCTGCCGGCG CGCTGGGGCG GTCGCGGGCG CTTCGTGATC
CTCGAGACCG GCTTCGGCCT GGGCAACAAC TTCCTCGCCA CCTGGGACGC CTGGCAACGT
GACCCGCAGC GCTGCGAGCG GCTGGTGTTC GTCTCGATCG AGAAGCATCC GCTGACGCGC
GAGGACCTGG CTCGTGCGCA CGCGGCTTCA CCGCTGCCCG AATTGGCCCG TGCACTGGTT
TCGGCCTGGC CCTTGTCGAC GCCGAATTTG CATCCGATCG CCTTCGAAGG CGGTCGCGTG
CAACTGCTGC TGGGTTTCGG TGACGTGGCC TTGCTGCTGC CGCAATTGGT GGTGTCGGTC
GACGCCTTCT TCCTCGACGG GTTCGCCCCG GCCCGCAATC CTGAGATGTG GGAGCCGCGC
CGGCTTCAGC GCCTGGGCCG GCTCGCCGCG CCCGGCGCAA CCGCGGCGAC CTGGAGCGCT
GCGCGGGTCG TGCGTGACGG GCTCTCGGCA GCCGGCTTCA CGGTGGAAAC CACAGCCGGT
ACCGGCGGCA AGCGCGACAT CACGGTGGCG CGATTCACAC CAAGGCACAT CGCGGTGCCC
CCGCCCGGTG GCTGGCATGC GCACGACGCG GCCTCACGCG AAGCCTTGGT GATCGGCGCC
GGTCTGGCCG GCTGCGCGGC AGCCTGGGCG TTGTCGCAAC AGGGCTGGCA GTGCCAGCTG
CTGGATCGTG CGGCGGAGCC GGCCGACGTC ACGTCTGGCA ATCCGGCCGG CCTGTTCCAC
GGCAGCTTCC ACCGCGACGA CGGTCCGCAT GCCCGCACAC TGCGAGCCGC GGCACTGGCG
ACCGAACGCC TGGCCGGCGC GTGGATCGCG CAGGGCCGAG TGTCCGGCCA GCTCGCTGGC
TGCCTGCGCC TCGAATCGAG GTGGTCGGAC GACGCGGCGC GCGCGGCAAT GGCGGCCCAG
CAGATCGCCC CCGGCTATAT CGACTGGATG GACCGGGCCG TCGCGAGCAC GCTCTCCGGC
CTCGCCCTGC CGAGCGGCGC CTGGTTCTAC CCGGGCGGCG GCTGGCTCGC GCCGCGCGAC
TATGCGCGCG AACTGCTTGC GCGCAGTGGC TCCCTCTTTC GGGGCGGCAT CGACGTGGCG
ACCATCGAGC GGCATAGCGG CTTGTGGCGC GTGCTCGACG AACAGCGCCA GGTGATCGCC
GAAGCACCGG TGCTGGTGCT GGCCAACGGG CTCGGTGCGA ACGGCCTGCT GGCCTCCGGC
CGCGGTGAGG TGCCGTGGCC GCTGACGGCG GTGCGCGGAC AGATCAGCAG CCTGGCGACC
GACGGTCACC CCGCCACCCT GCCCTGCCCG CGCCTGCCGG TCGCCGGCGG CGGCTATGTG
CTGCCGCAGA CGGGCGGTCG GCTGCTCTTC GGCGCCACCA GCCAGCCCGA CGACATCGAT
CCCGCGCTGC GCGATGCCGA CCACCGATTC AATCTGCAAC AGCTCGCAGG ACTGTCGGGC
TGCGACGTCG AAGCCTGGTC CAGCCTGCCC TGGCAGGGCC GCGTGGGGTG GCGCGCAGTG
ACGAGCGATC GGCTGCCGCT GATCGGTGCA GTGCCCGACC TGGAGGCGCT GGACCGCACT
TCGCGCGCCG ACCAGCCGCG CTTCGTGCCG CGCCAGCGCG ACGCGCGAGG CGGTCTCTAT
GTCTTCACCG GCCTCGGTTC GCGCGGCATC ACCTGGGCCG CGCTCGGTGG CCAGTTGCTG
GCCTCGTGGA TCAGCGGCGC GCCCTGCCCG CTCGAAGCCG ATCTGCGCGA CGCGCTCGAC
CCCGCGCGCT ACGCGCTGCC GCGCTGGCGC AGCGACTCGT AG
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| Protein sequence | MKTAPITPGR LAFSPDGVPL APEFGDVYHP AAGALQQAHH VFLGGNRLPA RWGGRGRFVI
LETGFGLGNN FLATWDAWQR DPQRCERLVF VSIEKHPLTR EDLARAHAAS PLPELARALV
SAWPLSTPNL HPIAFEGGRV QLLLGFGDVA LLLPQLVVSV DAFFLDGFAP ARNPEMWEPR
RLQRLGRLAA PGATAATWSA ARVVRDGLSA AGFTVETTAG TGGKRDITVA RFTPRHIAVP
PPGGWHAHDA ASREALVIGA GLAGCAAAWA LSQQGWQCQL LDRAAEPADV TSGNPAGLFH
GSFHRDDGPH ARTLRAAALA TERLAGAWIA QGRVSGQLAG CLRLESRWSD DAARAAMAAQ
QIAPGYIDWM DRAVASTLSG LALPSGAWFY PGGGWLAPRD YARELLARSG SLFRGGIDVA
TIERHSGLWR VLDEQRQVIA EAPVLVLANG LGANGLLASG RGEVPWPLTA VRGQISSLAT
DGHPATLPCP RLPVAGGGYV LPQTGGRLLF GATSQPDDID PALRDADHRF NLQQLAGLSG
CDVEAWSSLP WQGRVGWRAV TSDRLPLIGA VPDLEALDRT SRADQPRFVP RQRDARGGLY
VFTGLGSRGI TWAALGGQLL ASWISGAPCP LEADLRDALD PARYALPRWR SDS
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