Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_2586 |
Symbol | mnmC |
ID | 8086976 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | + |
Start bp | 3031963 |
End bp | 3033990 |
Gene Length | 2028 bp |
Protein Length | 675 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644836656 |
Product | 5-methylaminomethyl-2-thiouridine methyltransferase |
Protein accession | YP_002988185 |
Protein GI | 242240004 |
COG category | [E] Amino acid transport and metabolism [S] Function unknown |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) [COG4121] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR03197] tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCACTC CCCCCATTCG GCACGCCGAC CTGAGTTGGA ATGCTCAGGG TACACCTGTA TCGCAACAGT TTGATGACGT CTATTTTTCC AATCAGGACG GTCTGGCGGA GACCCGCTAC GTCTTTCTAC AGGGAAACGA CCTTCCGCTA CGCTTCGCCC GGCATACCGA GGCGCTGTTC ACCGTCGCGG AAACCGGCTT CGGCACCGGG CTGAATTTTC TGACGCTGTG GCAGGCGTTC GCGCAGTTTC ATCAACAGCA ACCTAACGCC GGGTTGCAAC GTCTGCATTT CATCAGCTTT GAAAAATTTC CGCTGCGCCA GGCCGACCTG ATCGCCGCCC ATCAACGCTG GCCGGAATTG GCGTCTTATG CGCAGGCATT ACAACAGCAA TGGCCGAGCG CCGTACCGGG GTGCCACCGG CTGATTCTGG CGCAAGGCCG CATCACGCTG GATTTGTGGT TCGGCGATGT GAACGATCTG CTACCGCAAC TGAGCGACAG CCTGACGAAC CGCATCGACG CCTGGTTTTT GGATGGTTTC GCGCCGTCCA AAAACCCGGA CATGTGGACG GACAACCTGT TCAACGCCAT GGCCCGTCTG TGCCGGGCCG GGGGCACGTT CGCCACCTTC ACTGCGGCGG GTTTTGTACG GCGCGGATTG CAGCAGGCCG GTTTCGACGT GAGTAAAATC AAAGGATTCG GCCAGAAGCG AGAGATGCTG AGCGGTACGC TGCCGGCGGC GATCCCCGCG CCGGATGACG CGCCGTGGTA TACCCGCCCT GCCGCCGCCC GCACCGACGA TATCGCCATC ATCGGCGGCG GTGTGGCCTC CGTACTGAGC GCACTGGCGT TGTTGCGGCG CGGCGCGCGC GTCACCCTGT ACTGCGCCGA TCTTCAGGTG GGAACCGGTG CTTCCGGCAA TCGTCAGGGC GCGCTCTATC CCTTGCTGAA CGACCAGCAG GACGCACTGT CCCGCTTTTT CGCGCTGGCG TTCGGTTATG CCCGCCGTTG CTATGACGCG CTGGCGGCGA CCGGCGCAAC GTTTGAACAC GACTGGTGCG GCGTCAGCCA GCTTGCCTAT GACGAGAAAA GCGCGCGTAA AATCGACCAG ATATTGCAGG GCGGCTGGCC TCAGGAACTG GTTCAGGCTG GCGATGCAAC CGCAATGACG GCGCGCACCG GCGTTCCGCT GACCACCCGG GGTCTGACCT ATCCACAGGG CGGTTGGCTG TGCCCCGCCG AATTGACGGT CTCGGCGTTG GAGCTGGCGA AACGACAAGG GCTACAGGCG GAAATGGCAA CCACGGTCAA TTCGCTGGAG CACACCGATA AGGGGTGGCG TCTCGGTCTT GACGATGGGC GTCGGCCGGA GCACGCCGTG GTGATTCTGG CCAACGGGCA CCAGCTTGCC GACTGGCCGC AAACCCAAAA CGTGCCGGTG TATGCTGTGA GCGGCCAGGT CAGCCACGTT CCGACCGGGG AAGAACTGGG CGCGCTGCGT CAGGTGCTGT GCTACGACGG CTATCTCACC CCGGTCAGCC CGACGCACCA GCGCCATTGC ATCGGCGCCA GCTACCATCG CGGCGATACA CGTACCGACT ATCGGGACGA CGACCAGCGG CAAAACCGGC AGCGGCTGAT CGATTGCCTG CCCGATAGCC AGTGGCCGCA GAGTGTCGAT ATCAGCGACG CCCAGGCGCG CAGCGGTGTG CGGTGCGCCA TCCGCGATCA CCTGCCGCTG GTTGGCGCGG CGCCGGATTA TGCACGCACG TTGATCAACT ACCAGGATTT GCCGCAGCAA TTGGCCGATG GCACGGACAT TCCCCCGGCG CCGGTGCATG ACGGGCTGTT CATGATCGGC GCGCTGGGCT CCCGCGGGTT GTGCTCCGCG CCGCTGGCGG CGGAGCTGCT GGCGTCGCAG ATCGTTGGCG AGCCGCTGCC GCTGGATAAA GACACGCTGG CGGCATTGCA TCCGCATCGT TTTTGGGTGC GAAAATTGCT GAAAGGCAAA AATCCGCACG CTCGATAG
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Protein sequence | MTTPPIRHAD LSWNAQGTPV SQQFDDVYFS NQDGLAETRY VFLQGNDLPL RFARHTEALF TVAETGFGTG LNFLTLWQAF AQFHQQQPNA GLQRLHFISF EKFPLRQADL IAAHQRWPEL ASYAQALQQQ WPSAVPGCHR LILAQGRITL DLWFGDVNDL LPQLSDSLTN RIDAWFLDGF APSKNPDMWT DNLFNAMARL CRAGGTFATF TAAGFVRRGL QQAGFDVSKI KGFGQKREML SGTLPAAIPA PDDAPWYTRP AAARTDDIAI IGGGVASVLS ALALLRRGAR VTLYCADLQV GTGASGNRQG ALYPLLNDQQ DALSRFFALA FGYARRCYDA LAATGATFEH DWCGVSQLAY DEKSARKIDQ ILQGGWPQEL VQAGDATAMT ARTGVPLTTR GLTYPQGGWL CPAELTVSAL ELAKRQGLQA EMATTVNSLE HTDKGWRLGL DDGRRPEHAV VILANGHQLA DWPQTQNVPV YAVSGQVSHV PTGEELGALR QVLCYDGYLT PVSPTHQRHC IGASYHRGDT RTDYRDDDQR QNRQRLIDCL PDSQWPQSVD ISDAQARSGV RCAIRDHLPL VGAAPDYART LINYQDLPQQ LADGTDIPPA PVHDGLFMIG ALGSRGLCSA PLAAELLASQ IVGEPLPLDK DTLAALHPHR FWVRKLLKGK NPHAR
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