| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_2586 |
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| Symbol | mnmC |
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| ID | 8086976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | + |
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| Start bp | 3031963 |
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| End bp | 3033990 |
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| Gene Length | 2028 bp |
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| Protein Length | 675 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644836656 |
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| Product | 5-methylaminomethyl-2-thiouridine methyltransferase |
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| Protein accession | YP_002988185 |
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| Protein GI | 242240004 |
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| COG category | [E] Amino acid transport and metabolism
[S] Function unknown |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating)
[COG4121] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR03197] tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCACTC CCCCCATTCG GCACGCCGAC CTGAGTTGGA ATGCTCAGGG TACACCTGTA
TCGCAACAGT TTGATGACGT CTATTTTTCC AATCAGGACG GTCTGGCGGA GACCCGCTAC
GTCTTTCTAC AGGGAAACGA CCTTCCGCTA CGCTTCGCCC GGCATACCGA GGCGCTGTTC
ACCGTCGCGG AAACCGGCTT CGGCACCGGG CTGAATTTTC TGACGCTGTG GCAGGCGTTC
GCGCAGTTTC ATCAACAGCA ACCTAACGCC GGGTTGCAAC GTCTGCATTT CATCAGCTTT
GAAAAATTTC CGCTGCGCCA GGCCGACCTG ATCGCCGCCC ATCAACGCTG GCCGGAATTG
GCGTCTTATG CGCAGGCATT ACAACAGCAA TGGCCGAGCG CCGTACCGGG GTGCCACCGG
CTGATTCTGG CGCAAGGCCG CATCACGCTG GATTTGTGGT TCGGCGATGT GAACGATCTG
CTACCGCAAC TGAGCGACAG CCTGACGAAC CGCATCGACG CCTGGTTTTT GGATGGTTTC
GCGCCGTCCA AAAACCCGGA CATGTGGACG GACAACCTGT TCAACGCCAT GGCCCGTCTG
TGCCGGGCCG GGGGCACGTT CGCCACCTTC ACTGCGGCGG GTTTTGTACG GCGCGGATTG
CAGCAGGCCG GTTTCGACGT GAGTAAAATC AAAGGATTCG GCCAGAAGCG AGAGATGCTG
AGCGGTACGC TGCCGGCGGC GATCCCCGCG CCGGATGACG CGCCGTGGTA TACCCGCCCT
GCCGCCGCCC GCACCGACGA TATCGCCATC ATCGGCGGCG GTGTGGCCTC CGTACTGAGC
GCACTGGCGT TGTTGCGGCG CGGCGCGCGC GTCACCCTGT ACTGCGCCGA TCTTCAGGTG
GGAACCGGTG CTTCCGGCAA TCGTCAGGGC GCGCTCTATC CCTTGCTGAA CGACCAGCAG
GACGCACTGT CCCGCTTTTT CGCGCTGGCG TTCGGTTATG CCCGCCGTTG CTATGACGCG
CTGGCGGCGA CCGGCGCAAC GTTTGAACAC GACTGGTGCG GCGTCAGCCA GCTTGCCTAT
GACGAGAAAA GCGCGCGTAA AATCGACCAG ATATTGCAGG GCGGCTGGCC TCAGGAACTG
GTTCAGGCTG GCGATGCAAC CGCAATGACG GCGCGCACCG GCGTTCCGCT GACCACCCGG
GGTCTGACCT ATCCACAGGG CGGTTGGCTG TGCCCCGCCG AATTGACGGT CTCGGCGTTG
GAGCTGGCGA AACGACAAGG GCTACAGGCG GAAATGGCAA CCACGGTCAA TTCGCTGGAG
CACACCGATA AGGGGTGGCG TCTCGGTCTT GACGATGGGC GTCGGCCGGA GCACGCCGTG
GTGATTCTGG CCAACGGGCA CCAGCTTGCC GACTGGCCGC AAACCCAAAA CGTGCCGGTG
TATGCTGTGA GCGGCCAGGT CAGCCACGTT CCGACCGGGG AAGAACTGGG CGCGCTGCGT
CAGGTGCTGT GCTACGACGG CTATCTCACC CCGGTCAGCC CGACGCACCA GCGCCATTGC
ATCGGCGCCA GCTACCATCG CGGCGATACA CGTACCGACT ATCGGGACGA CGACCAGCGG
CAAAACCGGC AGCGGCTGAT CGATTGCCTG CCCGATAGCC AGTGGCCGCA GAGTGTCGAT
ATCAGCGACG CCCAGGCGCG CAGCGGTGTG CGGTGCGCCA TCCGCGATCA CCTGCCGCTG
GTTGGCGCGG CGCCGGATTA TGCACGCACG TTGATCAACT ACCAGGATTT GCCGCAGCAA
TTGGCCGATG GCACGGACAT TCCCCCGGCG CCGGTGCATG ACGGGCTGTT CATGATCGGC
GCGCTGGGCT CCCGCGGGTT GTGCTCCGCG CCGCTGGCGG CGGAGCTGCT GGCGTCGCAG
ATCGTTGGCG AGCCGCTGCC GCTGGATAAA GACACGCTGG CGGCATTGCA TCCGCATCGT
TTTTGGGTGC GAAAATTGCT GAAAGGCAAA AATCCGCACG CTCGATAG
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| Protein sequence | MTTPPIRHAD LSWNAQGTPV SQQFDDVYFS NQDGLAETRY VFLQGNDLPL RFARHTEALF
TVAETGFGTG LNFLTLWQAF AQFHQQQPNA GLQRLHFISF EKFPLRQADL IAAHQRWPEL
ASYAQALQQQ WPSAVPGCHR LILAQGRITL DLWFGDVNDL LPQLSDSLTN RIDAWFLDGF
APSKNPDMWT DNLFNAMARL CRAGGTFATF TAAGFVRRGL QQAGFDVSKI KGFGQKREML
SGTLPAAIPA PDDAPWYTRP AAARTDDIAI IGGGVASVLS ALALLRRGAR VTLYCADLQV
GTGASGNRQG ALYPLLNDQQ DALSRFFALA FGYARRCYDA LAATGATFEH DWCGVSQLAY
DEKSARKIDQ ILQGGWPQEL VQAGDATAMT ARTGVPLTTR GLTYPQGGWL CPAELTVSAL
ELAKRQGLQA EMATTVNSLE HTDKGWRLGL DDGRRPEHAV VILANGHQLA DWPQTQNVPV
YAVSGQVSHV PTGEELGALR QVLCYDGYLT PVSPTHQRHC IGASYHRGDT RTDYRDDDQR
QNRQRLIDCL PDSQWPQSVD ISDAQARSGV RCAIRDHLPL VGAAPDYART LINYQDLPQQ
LADGTDIPPA PVHDGLFMIG ALGSRGLCSA PLAAELLASQ IVGEPLPLDK DTLAALHPHR
FWVRKLLKGK NPHAR
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