| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3066 |
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| Symbol | mnmC |
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| ID | 6244545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 3443539 |
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| End bp | 3445506 |
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| Gene Length | 1968 bp |
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| Protein Length | 655 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642594868 |
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| Product | 5-methylaminomethyl-2-thiouridine methyltransferase |
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| Protein accession | YP_001859280 |
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| Protein GI | 186477810 |
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| COG category | [E] Amino acid transport and metabolism
[S] Function unknown |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating)
[COG4121] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR03197] tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.16811 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACC CGCTCGTTCC CGCCGTCCTT GCATTCCGCG ACAACGGCAC GCCTTATTCG
CCCCTTTATG ACGACATCTA TCACAGCGCC GTCGGCGGCC TCGCGCAGGC CGATTACGTC
TTTCTGAAAG GCAATGATTT GCCTTCACGC TGGCAGAAAC GGCGCCTCTT CACGGTGCTG
GAGACGGGTT TCGGCATGGG TATCAATTTC CTCGTGACGT GGGCGGCATG GCGCGCCGAC
CCCGATCGAT GTGAACGGCT GCACTTCGTT TCGACGGAAA AGCATCCGTT TTCACGCGAG
GATCTGATCG CGGCGACGAA CTCTTCCGTT GCGGATGCAT CGATCGCCGC GCTTGCGGAG
CAACTCGCCA ATGCATGGCC GACGCTCGTT CCGGGCACGC ACCGGCTGGA GTTTGAAGAA
GGCCGCGTGA TCCTTACGCT GGTGTTCGGA GACGCCGTCC AAACGCTGCC CACGCTCTGG
CTGCGTGCCG ACGCGTTTTA TCTGGATGGC TTTTCCCCTG ACAGGAACCC CGATTTGTGG
ACGCCGGCGG TCTTCAAGTC ACTTGCGCGA CTCGCCGGCG ACGAAGCGAC CTTCGCCACT
TACACGAGCT CAGGCGACGT CAAACGCAGC TTGCAACAAG CCGGTTTCGA GTACAGAAAA
GTCGACGGCT TTGGGTGGAA ACGCGCGATG CTGGTCGGAC GCTTTGCGCC GCGCTACCGC
GTGCGACGTC ATGAACCGCC TTTGCCGCTT GCTGTCGGCG AACGGCACGC CATCGTGATC
GGCACGGGAC TCGCGGGGTG TGCGGCGATC GAACGGCTCA CGGCGCGCGG CTGGCGTGTC
ACGTCGCTCG AACGGCATGC GGATGTCGCG CGCGACGCGT CGGGCAATCC CGCGGGCGTG
TTTCATCCGA TGATGTCGCG CGACGACAGC GTCGGCTCGC GCATCACACG CGCAGGCTTT
TTGTACGCGT TGCGGCAGTG GTCCGCACTC GAGCACCGCG GGCATCGTCC ATTGCGCGGT
CCCGAAGGTC TGCTGCAAAT TGCCGCCGAT GAAGAGGAAG CGTTGGCGAT GGCGCACACG
TTCGCGTCGT TTGCCTGGCC ACGTGAGTAC GTAGTCTCCG TGACTCGCGA CGATGCGGAG
CGCATCGCCA ATATGCGCGT CGCGCGGGGC GGCTGGCTGT TTCCACATGG CGGCTGGATT
GATCCCGCTT CGTTGTGCGC AGCGCAGTGC GAAGCGGCGG GAGGCTTGCT CGAGCGACGC
TTCAATGTCG CCGCTGCGCG CGTCGAACGG TTGGAGAATC AATGGATTGT GTTCGACGAA
AACGGCGCCG CCGTGGTGAG TGCACCCGTC GTCATCTTCG CGAATGCGCA TGAAGCGGCG
CGCGTTGCCG GCTTGCATTA TGCGTCCACG CGCAGCGTGC GCGGCCAGTT GACGCTCTTG
CCCGCCGACG CGACCAACGC GCCGCGCCTG CCTGTGATCG GCGAAGGATA TGCGTTGCCG
CTGCTCGACG GCGTCACGCT GACGGGTGCG ACGTACGACA TCGACGATCC CGACACACGT
TTGCGCGACG GCGCGCACAT CGAAAACATC GAGCGGGTCG CGCAGATGCT GCCCGACATG
CGCGACGCGT TCAACGTGCA TGCGCCTTCT TCGCTGACAG GGCGCGTCGC GTTTCGCTGC
GTGACGAGCG ATCGTTTGCC GATGATCGGC GCATTCGCCG ACGAAGCCGC CGCGATCCGC
GATGCCGGCA AACTATGCGG CGCGTGGCCG CTGGATCTGC CGCGTGCGGA TGGTCTGTAC
GGCGCATTCG CGTTCGGATC GCGCGGACTC GTATGGGCGT CGCTCGGTGC GGAGTTGATG
GCTTCGCAAA TCGAAGGCGA GCCTTGGCCG ATCGAACGCG ATCTCGCTGA AGCGCTGGAC
CCCGCGCGCT TTCTGCTGCG CGCATTGCGT CAGGGCACGG CCAGCTGA
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| Protein sequence | MTDPLVPAVL AFRDNGTPYS PLYDDIYHSA VGGLAQADYV FLKGNDLPSR WQKRRLFTVL
ETGFGMGINF LVTWAAWRAD PDRCERLHFV STEKHPFSRE DLIAATNSSV ADASIAALAE
QLANAWPTLV PGTHRLEFEE GRVILTLVFG DAVQTLPTLW LRADAFYLDG FSPDRNPDLW
TPAVFKSLAR LAGDEATFAT YTSSGDVKRS LQQAGFEYRK VDGFGWKRAM LVGRFAPRYR
VRRHEPPLPL AVGERHAIVI GTGLAGCAAI ERLTARGWRV TSLERHADVA RDASGNPAGV
FHPMMSRDDS VGSRITRAGF LYALRQWSAL EHRGHRPLRG PEGLLQIAAD EEEALAMAHT
FASFAWPREY VVSVTRDDAE RIANMRVARG GWLFPHGGWI DPASLCAAQC EAAGGLLERR
FNVAAARVER LENQWIVFDE NGAAVVSAPV VIFANAHEAA RVAGLHYAST RSVRGQLTLL
PADATNAPRL PVIGEGYALP LLDGVTLTGA TYDIDDPDTR LRDGAHIENI ERVAQMLPDM
RDAFNVHAPS SLTGRVAFRC VTSDRLPMIG AFADEAAAIR DAGKLCGAWP LDLPRADGLY
GAFAFGSRGL VWASLGAELM ASQIEGEPWP IERDLAEALD PARFLLRALR QGTAS
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