More than 300 homologs were found in PanDaTox collection
for query gene Arth_3895 on replicon NC_008541
Organism: Arthrobacter sp. FB24



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008541  Arth_3895  extracellular solute-binding protein  100 
 
 
433 aa  884    Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2274  extracellular solute-binding protein family 1  53.27 
 
 
428 aa  462  1e-129  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.837023  normal 
 
 
-
 
NC_013131  Caci_3157  extracellular solute-binding protein family 1  55.44 
 
 
429 aa  440  9.999999999999999e-123  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0206164  normal  0.300299 
 
 
-
 
NC_013172  Bfae_04930  ABC-type sugar transport system, periplasmic component  46.15 
 
 
442 aa  397  1e-109  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_0358  extracellular solute-binding protein family 1  31.84 
 
 
441 aa  204  3e-51  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0942  extracellular solute-binding protein  30.88 
 
 
418 aa  141  3e-32  Thermotoga petrophila RKU-1  Bacteria  normal  0.254009  n/a   
 
 
-
 
NC_010465  YPK_1634  extracellular solute-binding protein  25.35 
 
 
428 aa  132  1.0000000000000001e-29  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1527  carbohydrate ABC transporter periplasmic-binding protein  25.35 
 
 
428 aa  132  1.0000000000000001e-29  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_3366  extracellular solute-binding protein family 1  27.75 
 
 
441 aa  131  3e-29  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012793  GWCH70_1463  extracellular solute-binding protein family 1  27.08 
 
 
444 aa  116  6.9999999999999995e-25  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0721  extracellular solute-binding protein  25 
 
 
437 aa  103  4e-21  Petrotoga mobilis SJ95  Bacteria  normal  0.540981  n/a   
 
 
-
 
NC_009616  Tmel_0753  extracellular solute-binding protein  25.47 
 
 
437 aa  101  2e-20  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_1727  extracellular solute-binding protein family 1  25.18 
 
 
422 aa  97.1  6e-19  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010003  Pmob_0289  extracellular solute-binding protein  24.44 
 
 
437 aa  96.3  1e-18  Petrotoga mobilis SJ95  Bacteria  unclonable  0.00000019091  n/a   
 
 
-
 
NC_010483  TRQ2_1696  extracellular solute-binding protein  25.06 
 
 
436 aa  93.6  6e-18  Thermotoga sp. RQ2  Bacteria  hitchhiker  0.00506774  n/a   
 
 
-
 
NC_013521  Sked_03090  ABC-type sugar transport system, periplasmic component  25.87 
 
 
419 aa  90.5  5e-17  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.033461  normal 
 
 
-
 
NC_013721  HMPREF0424_1316  extracellular solute-binding protein  24.2 
 
 
423 aa  89  1e-16  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_012793  GWCH70_1392  extracellular solute-binding protein family 1  26.2 
 
 
445 aa  88.2  3e-16  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0291  extracellular solute-binding protein  24.76 
 
 
449 aa  87.8  3e-16  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_1886  extracellular solute-binding protein family 1  26.35 
 
 
435 aa  87  6e-16  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.23125 
 
 
-
 
NC_009620  Smed_4916  extracellular solute-binding protein  24.59 
 
 
410 aa  86.7  7e-16  Sinorhizobium medicae WSM419  Bacteria  normal  0.06645  normal  0.512511 
 
 
-
 
NC_013595  Sros_3339  Maltose-binding periplasmic protein/domains- like protein  25.2 
 
 
431 aa  85.9  0.000000000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.202326 
 
 
-
 
NC_011071  Smal_2683  extracellular solute-binding protein family 1  21.46 
 
 
446 aa  85.9  0.000000000000001  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.50155  normal 
 
 
-
 
NC_008243  Meso_4520  extracellular solute-binding protein  25.93 
 
 
415 aa  85.5  0.000000000000002  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009939  Dgeo_2919  ABC-type sugar transport system, periplasmic component  23.96 
 
 
407 aa  85.5  0.000000000000002  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_009486  Tpet_1552  extracellular solute-binding protein  26.83 
 
 
391 aa  84.3  0.000000000000004  Thermotoga petrophila RKU-1  Bacteria  decreased coverage  0.000000398035  n/a   
 
 
-
 
NC_012793  GWCH70_0701  extracellular solute-binding protein family 1  27.05 
 
 
432 aa  84  0.000000000000005  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0966  extracellular solute-binding protein  27.03 
 
 
392 aa  84  0.000000000000005  Thermotoga petrophila RKU-1  Bacteria  unclonable  0.0000000011003  n/a   
 
 
-
 
NC_010483  TRQ2_0984  extracellular solute-binding protein  27.03 
 
 
392 aa  84  0.000000000000005  Thermotoga sp. RQ2  Bacteria  decreased coverage  0.000118485  n/a   
 
 
-
 
NC_011899  Hore_20630  extracellular solute-binding protein family 1  24.27 
 
 
414 aa  83.6  0.000000000000006  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2845  extracellular solute-binding protein family 1  26.1 
 
 
439 aa  83.6  0.000000000000006  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010320  Teth514_1181  extracellular solute-binding protein  25.11 
 
 
413 aa  83.2  0.000000000000009  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.0000595288  n/a   
 
 
-
 
NC_010483  TRQ2_1614  extracellular solute-binding protein  26.48 
 
 
391 aa  82.4  0.00000000000001  Thermotoga sp. RQ2  Bacteria  hitchhiker  0.000159886  n/a   
 
 
-
 
NC_009953  Sare_0747  extracellular solute-binding protein  26.62 
 
 
433 aa  82.8  0.00000000000001  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00190936 
 
 
-
 
NC_010577  XfasM23_1550  extracellular solute-binding protein  21.79 
 
 
430 aa  80.9  0.00000000000004  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_2652  putative maltose/maltodextrin ABC transporter, maltose/maltodextrin-binding protein  26.03 
 
 
408 aa  80.9  0.00000000000004  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_010513  Xfasm12_1607  ABC transporter sugar-binding protein  21.79 
 
 
430 aa  80.5  0.00000000000005  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_1099  extracellular solute-binding protein  24.28 
 
 
457 aa  80.5  0.00000000000006  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_19770  extracellular solute-binding protein family 1  27.71 
 
 
423 aa  80.1  0.00000000000006  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2504  extracellular solute-binding protein family 1  27.23 
 
 
442 aa  80.1  0.00000000000006  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_2466  extracellular solute-binding protein family 1  26.44 
 
 
415 aa  79.7  0.00000000000009  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.0930087 
 
 
-
 
NC_009616  Tmel_0690  extracellular solute-binding protein  23.81 
 
 
402 aa  78.6  0.0000000000002  Thermosipho melanesiensis BI429  Bacteria  normal  0.678935  n/a   
 
 
-
 
NC_008699  Noca_4632  extracellular solute-binding protein  29.19 
 
 
419 aa  77.8  0.0000000000003  Nocardioides sp. JS614  Bacteria  normal  0.448727  n/a   
 
 
-
 
NC_011661  Dtur_0854  extracellular solute-binding protein family 1  24.79 
 
 
398 aa  78.2  0.0000000000003  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.124504  n/a   
 
 
-
 
NC_013525  Tter_0829  extracellular solute-binding protein family 1  25.81 
 
 
504 aa  78.2  0.0000000000003  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013205  Aaci_0075  extracellular solute-binding protein family 1  26.06 
 
 
441 aa  77.4  0.0000000000004  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00880  ABC transporter sugar binding protein  21.38 
 
 
440 aa  77.4  0.0000000000005  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.106592  n/a   
 
 
-
 
NC_014213  Mesil_3422  ABC-type sugar transport systems permease component  24.87 
 
 
410 aa  77.4  0.0000000000005  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_0753  extracellular solute-binding protein  23.22 
 
 
429 aa  77.4  0.0000000000005  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.00037903  n/a   
 
 
-
 
NC_014213  Mesil_3226  Transcriptional regulator  24.87 
 
 
410 aa  77.4  0.0000000000005  Meiothermus silvanus DSM 9946  Bacteria  normal  0.101031  normal 
 
 
-
 
NC_011661  Dtur_0381  extracellular solute-binding protein family 1  24.81 
 
 
421 aa  77  0.0000000000005  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3146  extracellular solute-binding protein  24.22 
 
 
424 aa  77  0.0000000000006  Arthrobacter sp. FB24  Bacteria  normal  0.0629231  n/a   
 
 
-
 
NC_011658  BCAH187_A0700  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  30.43 
 
 
458 aa  76.6  0.0000000000008  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_012854  Rleg_6528  extracellular solute-binding protein family 1  26.67 
 
 
415 aa  76.6  0.0000000000008  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0147922 
 
 
-
 
NC_013595  Sros_3538  Maltose-binding periplasmic protein/domains- like protein  25.17 
 
 
406 aa  75.9  0.000000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.385239  normal 
 
 
-
 
NC_012852  Rleg_6156  extracellular solute-binding protein family 1  25.07 
 
 
410 aa  75.9  0.000000000001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.889741  hitchhiker  0.000305646 
 
 
-
 
NC_008262  CPR_2338  maltose-binding periplasmic protein precursor  25.12 
 
 
408 aa  75.9  0.000000000001  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0625  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  30.43 
 
 
458 aa  76.3  0.000000000001  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011772  BCG9842_B4733  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  30.07 
 
 
458 aa  75.9  0.000000000001  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_1150  extracellular solute-binding protein  25 
 
 
441 aa  75.9  0.000000000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.344094  n/a   
 
 
-
 
NC_005945  BAS0538  glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein  27.71 
 
 
458 aa  75.5  0.000000000002  Bacillus anthracis str. Sterne  Bacteria  normal  0.406699  n/a   
 
 
-
 
NC_005957  BT9727_0480  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  30.07 
 
 
458 aa  75.5  0.000000000002  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0482  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  30.07 
 
 
458 aa  75.5  0.000000000002  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0569  glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein  27.71 
 
 
458 aa  75.5  0.000000000002  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_1020  extracellular solute-binding protein  25.24 
 
 
459 aa  75.1  0.000000000002  Clostridium thermocellum ATCC 27405  Bacteria  unclonable  0.0000000124434  n/a   
 
 
-
 
NC_013411  GYMC61_1511  extracellular solute-binding protein family 1  24.21 
 
 
424 aa  75.1  0.000000000002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011725  BCB4264_A0606  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  30.07 
 
 
458 aa  75.1  0.000000000002  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_2832  extracellular solute-binding protein family 1  25.64 
 
 
417 aa  75.1  0.000000000002  Actinosynnema mirum DSM 43827  Bacteria  normal  0.617934  n/a   
 
 
-
 
NC_011831  Cagg_0729  extracellular solute-binding protein family 1  26.55 
 
 
443 aa  75.1  0.000000000002  Chloroflexus aggregans DSM 9485  Bacteria  decreased coverage  0.0000254304  normal 
 
 
-
 
NC_010003  Pmob_0954  extracellular solute-binding protein  21.56 
 
 
399 aa  75.5  0.000000000002  Petrotoga mobilis SJ95  Bacteria  normal  0.0450213  n/a   
 
 
-
 
NC_011899  Hore_16190  extracellular solute-binding protein family 1  27.2 
 
 
401 aa  74.7  0.000000000003  Halothermothrix orenii H 168  Bacteria  decreased coverage  0.00305219  n/a   
 
 
-
 
NC_009380  Strop_0803  extracellular solute-binding protein  26.86 
 
 
433 aa  74.3  0.000000000003  Salinispora tropica CNB-440  Bacteria  normal  0.437157  normal 
 
 
-
 
NC_013947  Snas_2733  extracellular solute-binding protein family 1  26.07 
 
 
434 aa  74.7  0.000000000003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0602915  normal  0.13145 
 
 
-
 
NC_003909  BCE_0632  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein, putative  29.56 
 
 
458 aa  74.3  0.000000000004  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_06560  ABC-type sugar transport system, periplasmic component  25 
 
 
453 aa  74.3  0.000000000004  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_1229  extracellular solute-binding protein  23.79 
 
 
461 aa  73.9  0.000000000005  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0257979  normal  0.868479 
 
 
-
 
NC_011371  Rleg2_6572  extracellular solute-binding protein family 1  24.74 
 
 
410 aa  73.9  0.000000000005  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  decreased coverage  0.00103217  normal  0.480926 
 
 
-
 
NC_013172  Bfae_29010  ABC-type sugar transport system, periplasmic component  26.46 
 
 
434 aa  73.6  0.000000000007  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA1941  sugar ABC transporter, sugar-binding protein, putative  21.6 
 
 
434 aa  72  0.00000000002  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_1484  extracellular solute-binding protein  23.9 
 
 
444 aa  72  0.00000000002  Moorella thermoacetica ATCC 39073  Bacteria  unclonable  0.00000000000980441  normal 
 
 
-
 
NC_010320  Teth514_2201  extracellular solute-binding protein  25.91 
 
 
420 aa  72  0.00000000002  Thermoanaerobacter sp. X514  Bacteria  normal  0.455559  n/a   
 
 
-
 
NC_008698  Tpen_1453  extracellular solute-binding protein  23.45 
 
 
415 aa  71.6  0.00000000002  Thermofilum pendens Hrk 5  Archaea  normal  0.0104666  n/a   
 
 
-
 
NC_013595  Sros_3842  extracellular solute-binding protein family 1  26.52 
 
 
429 aa  72  0.00000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0316121  normal  0.0422385 
 
 
-
 
NC_009667  Oant_2485  extracellular solute-binding protein  24.94 
 
 
415 aa  71.2  0.00000000003  Ochrobactrum anthropi ATCC 49188  Bacteria  decreased coverage  0.00421769  n/a   
 
 
-
 
NC_013131  Caci_4993  extracellular solute-binding protein family 1  25.71 
 
 
432 aa  71.6  0.00000000003  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0450999  normal  0.012477 
 
 
-
 
NC_010003  Pmob_0523  extracellular solute-binding protein  28.64 
 
 
416 aa  71.2  0.00000000003  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_2108  extracellular solute-binding protein family 1  23.9 
 
 
430 aa  71.6  0.00000000003  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.553068 
 
 
-
 
NC_007333  Tfu_0832  multiple sugar transport system substrate-binding protein  25.82 
 
 
416 aa  70.9  0.00000000005  Thermobifida fusca YX  Bacteria  normal  0.669088  n/a   
 
 
-
 
NC_010003  Pmob_1438  extracellular solute-binding protein  23.79 
 
 
400 aa  70.5  0.00000000006  Petrotoga mobilis SJ95  Bacteria  unclonable  0.000000172655  n/a   
 
 
-
 
NC_009486  Tpet_0118  extracellular solute-binding protein  24.37 
 
 
420 aa  70.5  0.00000000006  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0116  extracellular solute-binding protein  24.37 
 
 
420 aa  70.5  0.00000000006  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_0227  extracellular solute-binding protein  24.54 
 
 
424 aa  70.1  0.00000000007  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.998322  normal  0.257108 
 
 
-
 
NC_013947  Snas_0203  extracellular solute-binding protein family 1  25.87 
 
 
441 aa  70.1  0.00000000007  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.346278  normal  0.123927 
 
 
-
 
NC_012848  Rleg_5048  extracellular solute-binding protein family 1  25.16 
 
 
424 aa  70.1  0.00000000008  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.133709  normal 
 
 
-
 
NC_011981  Avi_7341  sugar ABC transporter sugar-binding protein  23.38 
 
 
426 aa  69.7  0.00000000009  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_0712  extracellular solute-binding protein family 1  25 
 
 
397 aa  69.7  0.00000000009  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.518168  n/a   
 
 
-
 
NC_009972  Haur_0298  extracellular solute-binding protein  25 
 
 
486 aa  69.7  0.00000000009  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011988  Avi_5398  ABC transporter substrate binding protein (sugar)  27.46 
 
 
403 aa  69.3  0.0000000001  Agrobacterium vitis S4  Bacteria  normal  0.14652  n/a   
 
 
-
 
NC_013739  Cwoe_5802  extracellular solute-binding protein family 1  22.83 
 
 
444 aa  69.7  0.0000000001  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.0809589 
 
 
-
 
NC_013745  Htur_4488  extracellular solute-binding protein family 1  23.3 
 
 
434 aa  69.7  0.0000000001  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.395657  n/a   
 
 
-
 
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