Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1634 |
Symbol | |
ID | 6087822 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 1811394 |
End bp | 1812680 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641596704 |
Product | extracellular solute-binding protein |
Protein accession | YP_001720380 |
Protein GI | 170023875 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAGAAA AAATGAAGAA TACCCTGATT TCATTGGCAA TTGCCTCCAG TTGTGTGGTG TTTACTGGCT GTGACAATGA TACGGCATCG GCTAAAAATG AAAAACAGGA CATCACGCTT TGGATAGCGC CGAACAATGT CCAAGAGGCA TTCTGGAGCG AAGTGGTTGG GGAGTGGAAT AAACAACCAG ATAAAAAGAA AGTCGTCTTC TCAACGATCC CGGCAGCGGG CAGCTCTGAA GAGGCGATAA TGAATGCGAT TGCTTCTGAT CGCGCACCTG ATATCTCAGA AAATATTTTT ACCGGCTTTG GTTCTCAGCT TGCTGACTTA GGGCAGGTCG TTGATCTCTC GACGCTGGAT GGCTATGAAA ACTTAATTAG TACCCGTCAG ATGACGGATA TTATGGATAA TTGGCGCTAT AACGGAAAAA ACTACATCCT GCCGATTTAT ATGAACCCGG TACTCTTTTG GTGGCGTGGC GATTTATTAA AAGAGCAGGG CTTTAGCGAG GTGCCAAAAA CGTATGACGA GGTTTACGCA CTCTCCGAAA AATACACCAT TCCAGACAAA CGTTATGCGA TACAAGCTAC TTCTGGCCGT AACTGGTGGG ACCGTTGGTT TGATTTTATT GCCCTCTATT ATGCCCAAAG TGATGGCAAG CCTTATATCG CCAATCAGCA AGCCAGCTAT GATAACCAGG CCGGTCGTGA CGTTCTGGAC TTTATGCACA CACTCTTTTC AAAAAAATGG ACCCTTTATG ATTTTGGCCA GGATGATCCA TTAGTCACCG GTAAAGTATT GGGCGCAGTA CGCGGTCCTT GGGATATTAG CCGCTACCAA CAACAATATC CGGAAATTTT AAAGCACATA AAAATGGGGC CGATGCTGGT TAAAGAGCAG CAAGATAAAC CACATACTTT CGCCGATGGT AAAGGACTGG TGCTGTTTAG TCATTCAAAG GTTAAACCCG AGGCGTGGGA GTTTATCCAG TGGGTATTCA GCCAGCCCAA ATTCGATAAA CGTTGGATGG AATTGACCGG TATGCCACCC GCTAGGGCAG ATTTGCTCAC CAATCCTTTC TTTGCCGAAT ATTATCAGGA ACACCCGTAT GCCGCGGCCT ACGCTGAATA TGTCAACGTG GCGATACCTC CGGTTTCCAG TGGTGAAACG GTGGAAATTC AACGCAGCAT GACACAAATG ATTGAGAAGA CCGCGTTTAA TACTGCAACG CCTGATGAAG CATTGCAACA GTCAATAAAA GAAGTGAACG CGATTTTAAA GCCCTAA
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Protein sequence | MLEKMKNTLI SLAIASSCVV FTGCDNDTAS AKNEKQDITL WIAPNNVQEA FWSEVVGEWN KQPDKKKVVF STIPAAGSSE EAIMNAIASD RAPDISENIF TGFGSQLADL GQVVDLSTLD GYENLISTRQ MTDIMDNWRY NGKNYILPIY MNPVLFWWRG DLLKEQGFSE VPKTYDEVYA LSEKYTIPDK RYAIQATSGR NWWDRWFDFI ALYYAQSDGK PYIANQQASY DNQAGRDVLD FMHTLFSKKW TLYDFGQDDP LVTGKVLGAV RGPWDISRYQ QQYPEILKHI KMGPMLVKEQ QDKPHTFADG KGLVLFSHSK VKPEAWEFIQ WVFSQPKFDK RWMELTGMPP ARADLLTNPF FAEYYQEHPY AAAYAEYVNV AIPPVSSGET VEIQRSMTQM IEKTAFNTAT PDEALQQSIK EVNAILKP
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