| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0942 |
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| Symbol | |
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| ID | 5171124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 963502 |
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| End bp | 964758 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640563460 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001244536 |
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| Protein GI | 148270076 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.254009 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGGAAGA GAGTACTTCT TGTTATGCTC GTTGTTCTTT CTGTCTTTGC ATTCGCCGAG
GTCAAGAAAA TAGTGTTCTG GACAGCACCA AACCCGAATC AGGAAACTTT CTGGAAAGAA
CTCGTTGAAA AGTGGAACGC AGAACATCCG GATGTTCAGA TCGAGTGGTC GGTTATCCCA
GCCGCTGGAA GTTCTGAAGA AGCCATTTTG AACGCTATCG CAGCTGGAAA CGCACCAGAT
ATTTGTACCA ACATATTCAG TGGCTTTGCT GCCCAGCTCG CAGAAGAACT GGATGTTCTC
GTTGCTTTCG ATGAGGAGTT TGGAGAAGAG TTTTGGAAAC TTGCGGACGC AAGGAAAATG
AGAGGCATAC TCGAGGGCTG GAAGCTCAAC GGACATTACT ACGTCATACC CATTTACTCC
AACCCCATGC TCTTCTGGTG GAGAGGAGAT CTTCTGAAAG AACTTGGATA CGAAAAACCT
CCAAGAACTT ACTCTGAGAT TTACGAACTG GCAAAGAAAT GGGTTGTTCC GAAAGAAAAG
TACGTTATAA GAGCAGTCGC TGGGAGAAAC TGGTGGGACA GATGGTTCGA CTTCATAACG
TTCTACTATG CGGCAAGTGG TGGAAAACCC TACATCGAAA ATGGTAAAGC CGTCTTCAAT
AACGAGTACG GAAAAGCCGT CGCTGAATTC ATCTACACAC TCTTCAAGAA CGGCTGGACC
GCTGTGGATC TGGGTCAGGA TCCCTTCGAA AACGGTACGA TCCTTGGTCA GCTCATGGGA
CCATGGCACC TGAACTACAC GAAAGAACAT TATCCTAAGG TGTACCCGCA CATAGTGATG
ACACCTCCTC CTGTTCCAGA TAACTATCCT GAAAACAAAC CGATCTACAC TTTTGCAGAC
ACCAAAGGAC TCGTTATGTT CAAACATTCT AAATACAAAA AGGAAGCCTT TGAATTCATC
AAATGGGTCT TCTCCAACGC ACAGAATGAC GCACGCTGGA TCGAGCTCAC AAGGATGCCG
CCTGCAAGAG AAGATCTTGG AACGAATCCT GTGTTTGCTG AGTACATGAA GGATCCATAT
TTTGCAAAAA TAGCTGAGGC AGTTGCGTAT GCGGTCCCAC CCGCTCTAAT TACCAACACG
ATAGACGTCC AGAACACCAT GACCACGTAT TTGATAGAAC CTCTCATGTA TCTGAAGACT
ACACCCGAAG AAGCTCTAAA ACAGGCTGTT AAAGAAATCA ACGCACTCCT GTGGTGA
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| Protein sequence | MWKRVLLVML VVLSVFAFAE VKKIVFWTAP NPNQETFWKE LVEKWNAEHP DVQIEWSVIP
AAGSSEEAIL NAIAAGNAPD ICTNIFSGFA AQLAEELDVL VAFDEEFGEE FWKLADARKM
RGILEGWKLN GHYYVIPIYS NPMLFWWRGD LLKELGYEKP PRTYSEIYEL AKKWVVPKEK
YVIRAVAGRN WWDRWFDFIT FYYAASGGKP YIENGKAVFN NEYGKAVAEF IYTLFKNGWT
AVDLGQDPFE NGTILGQLMG PWHLNYTKEH YPKVYPHIVM TPPPVPDNYP ENKPIYTFAD
TKGLVMFKHS KYKKEAFEFI KWVFSNAQND ARWIELTRMP PAREDLGTNP VFAEYMKDPY
FAKIAEAVAY AVPPALITNT IDVQNTMTTY LIEPLMYLKT TPEEALKQAV KEINALLW
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