More than 300 homologs were found in PanDaTox collection
for query gene Sama_0552 on replicon NC_008700
Organism: Shewanella amazonensis SB2B



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008700  Sama_0552  putative methyl-accepting chemotaxis sensory transducer  100 
 
 
648 aa  1317    Shewanella amazonensis SB2B  Bacteria  normal  0.283806  decreased coverage  0.00439756 
 
 
-
 
NC_007954  Sden_2239  chemotaxis sensory transducer  34.66 
 
 
648 aa  352  8e-96  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_1439  methyl-accepting chemotaxis protein  31.44 
 
 
641 aa  308  3e-82  Colwellia psychrerythraea 34H  Bacteria  normal  0.336763  n/a   
 
 
-
 
NC_007492  Pfl01_0450  chemotaxis sensory transducer  31.47 
 
 
645 aa  306  1.0000000000000001e-81  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_0734  methyl-accepting chemotaxis sensory transducer  33.86 
 
 
643 aa  301  2e-80  Pseudomonas mendocina ymp  Bacteria  normal  0.770301  normal 
 
 
-
 
NC_010501  PputW619_4887  methyl-accepting chemotaxis sensory transducer  31.42 
 
 
645 aa  300  4e-80  Pseudomonas putida W619  Bacteria  normal  normal  0.658451 
 
 
-
 
NC_010322  PputGB1_0343  methyl-accepting chemotaxis sensory transducer  30.76 
 
 
645 aa  291  3e-77  Pseudomonas putida GB-1  Bacteria  normal  0.675969  normal 
 
 
-
 
NC_009512  Pput_0342  methyl-accepting chemotaxis sensory transducer  30.64 
 
 
645 aa  289  9e-77  Pseudomonas putida F1  Bacteria  normal  0.860801  normal 
 
 
-
 
NC_002947  PP_0320  methyl-accepting chemotaxis sensory transducer  30.75 
 
 
645 aa  289  1e-76  Pseudomonas putida KT2440  Bacteria  normal  decreased coverage  0.0000409011 
 
 
-
 
NC_009092  Shew_0596  methyl-accepting chemotaxis sensory transducer  30.91 
 
 
640 aa  288  2.9999999999999996e-76  Shewanella loihica PV-4  Bacteria  normal  normal  0.270432 
 
 
-
 
NC_009831  Ssed_3856  methyl-accepting chemotaxis sensory transducer  30.78 
 
 
640 aa  281  3e-74  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.825575 
 
 
-
 
NC_008345  Sfri_0080  methyl-accepting chemotaxis sensory transducer  31.54 
 
 
636 aa  279  1e-73  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_0099  chemotaxis sensory transducer  30.56 
 
 
639 aa  273  5.000000000000001e-72  Shewanella denitrificans OS217  Bacteria  unclonable  0.0000000152719  n/a   
 
 
-
 
NC_013457  VEA_001273  methyl-accepting chemotaxis protein  30.12 
 
 
638 aa  272  1e-71  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_4404  methyl-accepting chemotaxis sensory transducer  30.73 
 
 
638 aa  265  2e-69  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0156105 
 
 
-
 
NC_008700  Sama_3522  putative methyl-accepting chemotaxis sensory transducer  30.3 
 
 
636 aa  262  2e-68  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009784  VIBHAR_05150  adenylyl cyclase class-3/4/guanylyl cyclase  30.73 
 
 
650 aa  261  4e-68  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009456  VC0395_1102  methyl-accepting chemotaxis protein  30.06 
 
 
638 aa  261  4e-68  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_4454  methyl-accepting chemotaxis protein  31.1 
 
 
642 aa  259  1e-67  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010506  Swoo_4795  methyl-accepting chemotaxis sensory transducer  31.12 
 
 
638 aa  258  2e-67  Shewanella woodyi ATCC 51908  Bacteria  normal  0.884167  hitchhiker  0.000462611 
 
 
-
 
NC_009997  Sbal195_0283  methyl-accepting chemotaxis sensory transducer  30.94 
 
 
638 aa  255  2.0000000000000002e-66  Shewanella baltica OS195  Bacteria  normal  0.411591  normal 
 
 
-
 
NC_009052  Sbal_0282  methyl-accepting chemotaxis sensory transducer  30.94 
 
 
641 aa  255  2.0000000000000002e-66  Shewanella baltica OS155  Bacteria  normal  0.0149105  n/a   
 
 
-
 
NC_009665  Shew185_0275  methyl-accepting chemotaxis sensory transducer  30.94 
 
 
638 aa  255  2.0000000000000002e-66  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0085  methyl-accepting chemotaxis sensory transducer  29.36 
 
 
638 aa  254  3e-66  Shewanella loihica PV-4  Bacteria  normal  0.0647334  normal 
 
 
-
 
NC_011663  Sbal223_0279  methyl-accepting chemotaxis sensory transducer  30.94 
 
 
638 aa  254  3e-66  Shewanella baltica OS223  Bacteria  normal  0.983838  normal 
 
 
-
 
NC_008321  Shewmr4_0271  methyl-accepting chemotaxis sensory transducer  30.65 
 
 
638 aa  251  4e-65  Shewanella sp. MR-4  Bacteria  normal  0.758035  hitchhiker  0.0000678809 
 
 
-
 
NC_008322  Shewmr7_3750  methyl-accepting chemotaxis sensory transducer  30.65 
 
 
638 aa  250  6e-65  Shewanella sp. MR-7  Bacteria  normal  0.666265  normal  0.186245 
 
 
-
 
NC_008577  Shewana3_0272  methyl-accepting chemotaxis sensory transducer  30.65 
 
 
638 aa  249  1e-64  Shewanella sp. ANA-3  Bacteria  decreased coverage  0.00090491  hitchhiker  0.000000349734 
 
 
-
 
NC_009438  Sputcn32_0387  methyl-accepting chemotaxis sensory transducer  29.89 
 
 
638 aa  237  5.0000000000000005e-61  Shewanella putrefaciens CN-32  Bacteria  normal  0.408395  n/a   
 
 
-
 
NC_008228  Patl_0604  methyl-accepting chemotaxis sensory transducer  26.84 
 
 
641 aa  220  5e-56  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.471742  n/a   
 
 
-
 
NC_011138  MADE_00464  methyl-accepting chemotaxis protein  26.79 
 
 
636 aa  213  9e-54  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_3723  HAMP domain-containing protein  27.12 
 
 
628 aa  207  7e-52  Cupriavidus metallidurans CH34  Bacteria  normal  0.21159  normal  0.539738 
 
 
-
 
NC_008061  Bcen_4628  methyl-accepting chemotaxis sensory transducer  24.8 
 
 
620 aa  198  2.0000000000000003e-49  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_3736  methyl-accepting chemotaxis sensory transducer  24.64 
 
 
620 aa  197  4.0000000000000005e-49  Burkholderia cenocepacia HI2424  Bacteria  normal  0.455432  normal  0.0212994 
 
 
-
 
NC_010515  Bcenmc03_3785  methyl-accepting chemotaxis sensory transducer  25.47 
 
 
620 aa  196  9e-49  Burkholderia cenocepacia MC0-3  Bacteria  hitchhiker  0.0060774  normal  0.0147123 
 
 
-
 
NC_009439  Pmen_2154  methyl-accepting chemotaxis sensory transducer  29.56 
 
 
627 aa  194  3e-48  Pseudomonas mendocina ymp  Bacteria  normal  0.0789614  normal  0.507372 
 
 
-
 
NC_007953  Bxe_C1067  methyl-accepting chemotaxis sensory transducer  25.52 
 
 
634 aa  190  5.999999999999999e-47  Burkholderia xenovorans LB400  Bacteria  normal  0.318926  normal 
 
 
-
 
NC_009784  VIBHAR_06314  histidine kinase  29.84 
 
 
623 aa  190  8e-47  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013457  VEA_001073  N-acetylglucosamine regulated methyl-accepting chemotaxis protein  30.23 
 
 
628 aa  188  3e-46  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  34.36 
 
 
638 aa  188  3e-46  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_007511  Bcep18194_B2357  methyl-accepting chemotaxis sensory transducer  24.39 
 
 
620 aa  186  9e-46  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_1056  methyl-accepting chemotaxis protein  27.86 
 
 
630 aa  186  1.0000000000000001e-45  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009783  VIBHAR_00119  methyl-accepting chemotaxis protein  30.3 
 
 
626 aa  186  1.0000000000000001e-45  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009456  VC0395_0173  methyl-accepting chemotaxis protein  28.29 
 
 
639 aa  186  1.0000000000000001e-45  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009802  CCC13826_1957  methyl-accepting chemotaxis protein  25.34 
 
 
654 aa  185  2.0000000000000003e-45  Campylobacter concisus 13826  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0194  methyl-accepting chemotaxis sensory transducer  29.17 
 
 
623 aa  184  3e-45  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_5471  methyl-accepting chemotaxis sensory transducer  24.01 
 
 
620 aa  184  4.0000000000000006e-45  Burkholderia ambifaria AMMD  Bacteria  normal  0.407039  normal 
 
 
-
 
NC_010506  Swoo_0252  methyl-accepting chemotaxis sensory transducer with Cache sensor  29.94 
 
 
623 aa  184  5.0000000000000004e-45  Shewanella woodyi ATCC 51908  Bacteria  normal  0.866394  normal 
 
 
-
 
NC_009654  Mmwyl1_0130  methyl-accepting chemotaxis sensory transducer  30.49 
 
 
671 aa  183  7e-45  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_2364  methyl-accepting chemotaxis sensory transducer  30.45 
 
 
622 aa  182  2e-44  Shewanella baltica OS155  Bacteria  normal  0.493821  n/a   
 
 
-
 
NC_013456  VEA_003896  methyl-accepting chemotaxis protein  35.96 
 
 
545 aa  181  2.9999999999999997e-44  Vibrio sp. Ex25  Bacteria  decreased coverage  0.000288698  n/a   
 
 
-
 
NC_011663  Sbal223_2000  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.17 
 
 
545 aa  181  4e-44  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.0000194984 
 
 
-
 
NC_009052  Sbal_2358  methyl-accepting chemotaxis sensory transducer  32.17 
 
 
545 aa  180  5.999999999999999e-44  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_2347  methyl-accepting chemotaxis sensory transducer  32.17 
 
 
545 aa  180  7e-44  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_2463  methyl-accepting chemotaxis sensory transducer  32.17 
 
 
545 aa  180  7e-44  Shewanella baltica OS195  Bacteria  normal  0.0650014  normal  0.35347 
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  34.95 
 
 
541 aa  180  8e-44  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_001423  methyl-accepting chemotaxis protein  30.33 
 
 
623 aa  179  1e-43  Vibrio sp. Ex25  Bacteria  normal  0.896179  n/a   
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  31.95 
 
 
541 aa  179  1e-43  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
NC_009783  VIBHAR_01884  hypothetical protein  30.16 
 
 
627 aa  178  2e-43  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_004347  SO_2240  methyl-accepting chemotaxis protein  32.85 
 
 
545 aa  178  2e-43  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009656  PSPA7_2546  putative chemotaxis transducer  31.29 
 
 
714 aa  179  2e-43  Pseudomonas aeruginosa PA7  Bacteria  normal  0.410637  n/a   
 
 
-
 
NC_010086  Bmul_4997  methyl-accepting chemotaxis sensory transducer  25.04 
 
 
620 aa  178  2e-43  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.245568 
 
 
-
 
NC_008463  PA14_29760  putative chemotaxis transducer  31.08 
 
 
714 aa  178  2e-43  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_0895  methyl-accepting chemotaxis sensory transducer  28.83 
 
 
630 aa  179  2e-43  Shewanella sp. ANA-3  Bacteria  normal  normal  0.174985 
 
 
-
 
NC_007492  Pfl01_0354  chemotaxis sensory transducer, Cache sensor  29.84 
 
 
630 aa  178  3e-43  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  29.53 
 
 
712 aa  178  3e-43  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_009456  VC0395_0316  methyl-accepting chemotaxis protein  30.43 
 
 
652 aa  177  4e-43  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_04784  histidine kinase  29.05 
 
 
628 aa  177  4e-43  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_010552  BamMC406_3618  methyl-accepting chemotaxis sensory transducer  23.85 
 
 
620 aa  177  4e-43  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0344374  normal 
 
 
-
 
NC_009665  Shew185_4141  methyl-accepting chemotaxis sensory transducer  30.34 
 
 
623 aa  177  4e-43  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_4274  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.34 
 
 
623 aa  177  4e-43  Shewanella baltica OS195  Bacteria  normal  normal  0.179842 
 
 
-
 
NC_011663  Sbal223_0194  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.34 
 
 
623 aa  177  4e-43  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_3770  chemotaxis sensory transducer  34.76 
 
 
715 aa  177  5e-43  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  29.96 
 
 
712 aa  177  5e-43  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  34.02 
 
 
559 aa  177  6e-43  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  32.62 
 
 
541 aa  177  6e-43  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_013889  TK90_1029  methyl-accepting chemotaxis sensory transducer  33.72 
 
 
411 aa  177  7e-43  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_0323  methyl-accepting chemotaxis sensory transducer  30.9 
 
 
623 aa  176  9e-43  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_3480  methyl-accepting chemotaxis sensory transducer  27.1 
 
 
630 aa  176  9.999999999999999e-43  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0882  methyl-accepting chemotaxis sensory transducer  27.1 
 
 
630 aa  176  9.999999999999999e-43  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_1629  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.04 
 
 
623 aa  176  9.999999999999999e-43  Shewanella pealeana ATCC 700345  Bacteria  normal  0.438395  n/a   
 
 
-
 
NC_011663  Sbal223_3405  methyl-accepting chemotaxis sensory transducer with Cache sensor  27.1 
 
 
630 aa  176  9.999999999999999e-43  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A0908  methyl-accepting chemotaxis protein  26.84 
 
 
633 aa  176  9.999999999999999e-43  Vibrio cholerae O395  Bacteria  hitchhiker  0.00000172893  n/a   
 
 
-
 
NC_009997  Sbal195_3603  methyl-accepting chemotaxis sensory transducer  28.01 
 
 
630 aa  175  1.9999999999999998e-42  Shewanella baltica OS195  Bacteria  normal  0.840663  normal 
 
 
-
 
NC_008321  Shewmr4_3042  methyl-accepting chemotaxis sensory transducer  29.7 
 
 
630 aa  175  1.9999999999999998e-42  Shewanella sp. MR-4  Bacteria  normal  normal  0.397129 
 
 
-
 
NC_009783  VIBHAR_01753  hypothetical protein  37.13 
 
 
545 aa  175  2.9999999999999996e-42  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013456  VEA_003139  methyl-accepting chemotaxis protein  28.11 
 
 
627 aa  174  3.9999999999999995e-42  Vibrio sp. Ex25  Bacteria  normal  0.116124  n/a   
 
 
-
 
NC_009052  Sbal_0193  methyl-accepting chemotaxis sensory transducer  30.13 
 
 
623 aa  174  3.9999999999999995e-42  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2000  methyl-accepting chemotaxis sensory transducer  34.66 
 
 
560 aa  174  5e-42  Pseudomonas mendocina ymp  Bacteria  normal  0.0144557  normal  0.0324669 
 
 
-
 
NC_010506  Swoo_2814  methyl-accepting chemotaxis sensory transducer  33.24 
 
 
702 aa  174  5e-42  Shewanella woodyi ATCC 51908  Bacteria  normal  0.650804  normal 
 
 
-
 
NC_008740  Maqu_2789  methyl-accepting chemotaxis sensory transducer  35.86 
 
 
545 aa  174  5.999999999999999e-42  Marinobacter aquaeolei VT8  Bacteria  normal  0.888266  n/a   
 
 
-
 
NC_008322  Shewmr7_0930  methyl-accepting chemotaxis sensory transducer  29.48 
 
 
630 aa  174  5.999999999999999e-42  Shewanella sp. MR-7  Bacteria  normal  normal  0.257402 
 
 
-
 
NC_010506  Swoo_0808  methyl-accepting chemotaxis sensory transducer  34.43 
 
 
541 aa  174  5.999999999999999e-42  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  35.11 
 
 
637 aa  174  6.999999999999999e-42  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_009654  Mmwyl1_1586  methyl-accepting chemotaxis sensory transducer  26.87 
 
 
626 aa  173  7.999999999999999e-42  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_3984  methyl-accepting chemotaxis sensory transducer  33.17 
 
 
688 aa  173  7.999999999999999e-42  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_3752  methyl-accepting chemotaxis sensory transducer  30.42 
 
 
623 aa  173  9e-42  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_0969  methyl-accepting chemotaxis sensory transducer  26.38 
 
 
631 aa  172  1e-41  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3611  methyl-accepting chemotaxis sensory transducer  34.28 
 
 
634 aa  172  1e-41  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3950  methyl-accepting chemotaxis sensory transducer  30.42 
 
 
623 aa  172  1e-41  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
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