More than 300 homologs were found in PanDaTox collection
for query gene Xcel_2829 on replicon NC_013530
Organism: Xylanimonas cellulosilytica DSM 15894



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013530  Xcel_2829  transcriptional regulator, LuxR family  100 
 
 
865 aa  1685    Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_3197  transcriptional regulator, LuxR family  36.35 
 
 
876 aa  420  1e-116  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_35370  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  34.85 
 
 
881 aa  345  1e-93  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.705533  normal  0.60935 
 
 
-
 
NC_013530  Xcel_1823  transcriptional regulator, LuxR family  27.63 
 
 
846 aa  171  8e-41  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_34130  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  27.3 
 
 
853 aa  158  4e-37  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.208365 
 
 
-
 
NC_011886  Achl_3560  transcriptional regulator, LuxR family  25.05 
 
 
893 aa  66.2  0.000000002  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_011886  Achl_3561  transcriptional regulator, LuxR family  26.69 
 
 
908 aa  62  0.00000005  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_007650  BTH_II1538  LuxR family transcriptional regulator  50.79 
 
 
288 aa  61.2  0.00000007  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_1389  two component transcriptional regulator, LuxR family  36.84 
 
 
206 aa  61.6  0.00000007  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.744509  normal 
 
 
-
 
NC_008784  BMASAVP1_0350  LuxR family transcriptional regulator  50.79 
 
 
259 aa  61.2  0.00000008  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_006349  BMAA1366  LuxR family transcriptional regulator  50.79 
 
 
235 aa  61.2  0.00000009  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A2465  LuxR family transcriptional regulator  50.79 
 
 
273 aa  61.2  0.00000009  Burkholderia pseudomallei 1710b  Bacteria  normal  0.54611  n/a   
 
 
-
 
NC_008835  BMA10229_0630  LuxR family transcriptional regulator  50.79 
 
 
273 aa  61.2  0.00000009  Burkholderia mallei NCTC 10229  Bacteria  normal  0.0768185  n/a   
 
 
-
 
NC_009075  BURPS668_A1273  LuxR family transcriptional regulator  50.79 
 
 
273 aa  60.8  0.00000009  Burkholderia pseudomallei 668  Bacteria  normal  0.0925384  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1199  LuxR family transcriptional regulator  50.79 
 
 
235 aa  61.2  0.00000009  Burkholderia pseudomallei 1106a  Bacteria  normal  0.791762  n/a   
 
 
-
 
NC_009079  BMA10247_A0942  LuxR family transcriptional regulator  50.79 
 
 
235 aa  61.2  0.00000009  Burkholderia mallei NCTC 10247  Bacteria  normal  0.232709  n/a   
 
 
-
 
NC_008726  Mvan_4065  response regulator receiver protein  27.68 
 
 
864 aa  60.5  0.0000001  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.206312  normal  0.538479 
 
 
-
 
NC_013521  Sked_02220  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  42.86 
 
 
862 aa  59.7  0.0000002  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.591408  normal 
 
 
-
 
NC_012850  Rleg_1495  two component transcriptional regulator, LuxR family  35.96 
 
 
207 aa  59.3  0.0000003  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.194449  normal  0.395611 
 
 
-
 
NC_008541  Arth_1224  LuxR family transcriptional regulator  39.77 
 
 
894 aa  59.3  0.0000003  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_2417  transcriptional regulator, LuxR family  43.59 
 
 
998 aa  58.9  0.0000004  Conexibacter woesei DSM 14684  Bacteria  normal  0.0109186  decreased coverage  0.00199562 
 
 
-
 
NC_007511  Bcep18194_B0930  LuxR family transcriptional regulator  46.03 
 
 
246 aa  58.5  0.0000005  Burkholderia sp. 383  Bacteria  normal  0.6214  normal 
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  44.59 
 
 
213 aa  58.2  0.0000007  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_1998  transcriptional regulator, LuxR family  52.73 
 
 
956 aa  57.8  0.0000008  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0120259  n/a   
 
 
-
 
NC_010515  Bcenmc03_5501  LuxR family transcriptional regulator  32.2 
 
 
242 aa  57  0.000001  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.926313 
 
 
-
 
NC_008061  Bcen_3585  LuxR family transcriptional regulator  32.2 
 
 
251 aa  57  0.000001  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.976883  n/a   
 
 
-
 
NC_008391  Bamb_4166  LuxR family transcriptional regulator  48.28 
 
 
243 aa  57.4  0.000001  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  58.33 
 
 
225 aa  57.4  0.000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_008543  Bcen2424_4782  LuxR family transcriptional regulator  32.2 
 
 
251 aa  57  0.000001  Burkholderia cenocepacia HI2424  Bacteria  normal  0.134366  normal 
 
 
-
 
NC_010086  Bmul_3818  LuxR family transcriptional regulator  46.67 
 
 
264 aa  57.4  0.000001  Burkholderia multivorans ATCC 17616  Bacteria  normal  hitchhiker  0.0000221432 
 
 
-
 
NC_010552  BamMC406_4689  LuxR family transcriptional regulator  48.28 
 
 
243 aa  57.4  0.000001  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_2323  regulatory protein LuxR  32.02 
 
 
955 aa  57.8  0.000001  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1247  transcriptional regulator, LuxR family  28.3 
 
 
871 aa  56.2  0.000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_4976  two component transcriptional regulator, LuxR family  56.86 
 
 
218 aa  56.6  0.000002  Conexibacter woesei DSM 14684  Bacteria  normal  0.289575  normal  0.034027 
 
 
-
 
NC_009921  Franean1_5840  two component LuxR family transcriptional regulator  39.25 
 
 
237 aa  57  0.000002  Frankia sp. EAN1pec  Bacteria  normal  0.0206065  normal  0.380036 
 
 
-
 
NC_012792  Vapar_5404  transcriptional regulator, LuxR family  45.83 
 
 
208 aa  55.8  0.000003  Variovorax paradoxus S110  Bacteria  normal  0.803003  n/a   
 
 
-
 
NC_013093  Amir_3314  two component transcriptional regulator, LuxR family  48.05 
 
 
222 aa  55.8  0.000003  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.00833126  n/a   
 
 
-
 
NC_014151  Cfla_3393  transcriptional regulator, LuxR family  56.25 
 
 
201 aa  55.8  0.000003  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.269822  hitchhiker  0.000260191 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  51.92 
 
 
216 aa  55.8  0.000003  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_4627  two component transcriptional regulator, LuxR family  33.02 
 
 
226 aa  55.8  0.000004  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_1429  transcriptional regulator, LuxR family  46.15 
 
 
932 aa  55.8  0.000004  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_014213  Mesil_3486  hypothetical protein  49.06 
 
 
206 aa  55.8  0.000004  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3551  cyclic nucleotide-binding protein  55.77 
 
 
1001 aa  55.1  0.000005  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_4161  regulatory protein LuxR  36.52 
 
 
893 aa  55.5  0.000005  Gordonia bronchialis DSM 43247  Bacteria  normal  0.339617  n/a   
 
 
-
 
NC_011886  Achl_1291  transcriptional regulator, LuxR family  49.06 
 
 
912 aa  55.1  0.000005  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000111184 
 
 
-
 
NC_007777  Francci3_0765  two component LuxR family transcriptional regulator  51.92 
 
 
237 aa  55.1  0.000006  Frankia sp. CcI3  Bacteria  normal  0.272345  normal 
 
 
-
 
NC_013131  Caci_6044  two component transcriptional regulator, LuxR family  48.08 
 
 
226 aa  55.1  0.000006  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_4323  two component LuxR family transcriptional regulator  45.45 
 
 
215 aa  54.7  0.000006  Trichodesmium erythraeum IMS101  Bacteria  normal  0.115662  normal  0.727411 
 
 
-
 
NC_008699  Noca_3606  regulatory protein, LuxR  50 
 
 
229 aa  55.1  0.000006  Nocardioides sp. JS614  Bacteria  normal  0.527821  n/a   
 
 
-
 
NC_013757  Gobs_1300  transcriptional regulator, LuxR family  38.94 
 
 
910 aa  54.7  0.000007  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.632041  n/a   
 
 
-
 
NC_009664  Krad_0277  two component transcriptional regulator, LuxR family  50 
 
 
228 aa  54.7  0.000007  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0542563  normal  0.0298075 
 
 
-
 
NC_013739  Cwoe_0207  transcriptional regulator, LuxR family  39.24 
 
 
435 aa  54.7  0.000008  Conexibacter woesei DSM 14684  Bacteria  normal  0.314415  normal 
 
 
-
 
NC_007333  Tfu_2278  LuxR response regulator receiver  58.33 
 
 
217 aa  54.7  0.000008  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_3624  transcriptional regulator, LuxR family  43.1 
 
 
927 aa  54.7  0.000008  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_1292  transcriptional regulator, LuxR family  44.12 
 
 
845 aa  54.7  0.000008  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000000215082 
 
 
-
 
NC_008541  Arth_2998  two component LuxR family transcriptional regulator  48.08 
 
 
228 aa  54.7  0.000008  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1438  response regulator receiver  51.92 
 
 
213 aa  54.7  0.000008  Nocardioides sp. JS614  Bacteria  normal  0.494689  n/a   
 
 
-
 
NC_013595  Sros_5800  ATPase-like protein  50 
 
 
919 aa  54.7  0.000008  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.168685 
 
 
-
 
NC_014210  Ndas_3610  transcriptional regulator, LuxR family  46.55 
 
 
840 aa  54.3  0.000009  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_19250  transcriptional regulator, LuxR family  36.84 
 
 
894 aa  54.3  0.000009  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.368916  normal  0.454776 
 
 
-
 
NC_013595  Sros_1229  response regulator receiver protein  51.92 
 
 
212 aa  54.3  0.00001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.643884  hitchhiker  0.00799583 
 
 
-
 
NC_014158  Tpau_2414  two component transcriptional regulator, LuxR family  47.62 
 
 
215 aa  53.9  0.00001  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_012853  Rleg_5633  two component transcriptional regulator, LuxR family  33.59 
 
 
203 aa  53.9  0.00001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.603295  normal 
 
 
-
 
NC_008541  Arth_1221  LuxR family transcriptional regulator  38.89 
 
 
910 aa  53.9  0.00001  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_2245  transcriptional regulator, LuxR family  60.42 
 
 
956 aa  54.3  0.00001  Actinosynnema mirum DSM 43827  Bacteria  unclonable  0.00000425814  n/a   
 
 
-
 
NC_009806  Krad_4530  two component LuxR family transcriptional regulator  54.17 
 
 
241 aa  53.5  0.00001  Kineococcus radiotolerans SRS30216  Bacteria  normal  hitchhiker  0.00470183 
 
 
-
 
NC_009767  Rcas_4222  ATP-dependent transcription regulator LuxR  52.83 
 
 
309 aa  54.3  0.00001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.157864 
 
 
-
 
NC_011726  PCC8801_1580  two component transcriptional regulator, LuxR family  37.5 
 
 
216 aa  53.5  0.00001  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_1605  two component transcriptional regulator, LuxR family  37.5 
 
 
216 aa  53.5  0.00001  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_2710  two component transcriptional regulator, LuxR family  46.15 
 
 
226 aa  53.9  0.00001  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.0104012 
 
 
-
 
NC_013441  Gbro_0068  regulatory protein LuxR  28.21 
 
 
867 aa  53.9  0.00001  Gordonia bronchialis DSM 43247  Bacteria  normal  0.289946  n/a   
 
 
-
 
NC_013510  Tcur_4226  two component transcriptional regulator, LuxR family  50.94 
 
 
210 aa  53.9  0.00001  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2582  LuxR response regulator receiver  49.06 
 
 
233 aa  53.5  0.00002  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_0354  two component transcriptional regulator, LuxR family  52.83 
 
 
222 aa  53.1  0.00002  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_2254  LuxR family transcriptional regulator  47.27 
 
 
224 aa  52.8  0.00002  Anabaena variabilis ATCC 29413  Bacteria  decreased coverage  0.000000750634  normal 
 
 
-
 
NC_007413  Ava_3628  two component LuxR family transcriptional regulator  38.37 
 
 
225 aa  53.5  0.00002  Anabaena variabilis ATCC 29413  Bacteria  normal  0.717242  normal  0.142765 
 
 
-
 
NC_014165  Tbis_0649  LuxR family two component transcriptional regulator  51.92 
 
 
212 aa  53.5  0.00002  Thermobispora bispora DSM 43833  Bacteria  normal  0.93281  normal  0.368826 
 
 
-
 
NC_013739  Cwoe_1501  two component transcriptional regulator, LuxR family  42.37 
 
 
228 aa  53.5  0.00002  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.138703 
 
 
-
 
NC_013235  Namu_3632  two component transcriptional regulator, LuxR family  54 
 
 
209 aa  53.1  0.00002  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00835522  normal  0.0174868 
 
 
-
 
NC_008576  Mmc1_2093  two component LuxR family transcriptional regulator  49.06 
 
 
206 aa  53.1  0.00002  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.000328625  normal  0.180863 
 
 
-
 
NC_010717  PXO_01515  transcriptional regulator LuxR/uhpA family  39.18 
 
 
215 aa  53.5  0.00002  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.422594  n/a   
 
 
-
 
NC_002939  GSU3229  LuxR family DNA-binding response regulator  45.07 
 
 
229 aa  52.8  0.00003  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_0154  two component transcriptional regulator, LuxR family  45.07 
 
 
244 aa  52.4  0.00003  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007509  Bcep18194_C7042  LuxR family transcriptional regulator  50.91 
 
 
237 aa  52.4  0.00003  Burkholderia sp. 383  Bacteria  normal  normal  0.395305 
 
 
-
 
NC_007777  Francci3_0992  LuxR family transcriptional regulator  49.09 
 
 
814 aa  52.8  0.00003  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_1040  LuxR family transcriptional regulator  52.83 
 
 
216 aa  52.8  0.00003  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.723479  normal 
 
 
-
 
NC_013521  Sked_17030  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  53.57 
 
 
907 aa  52.8  0.00003  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.758711  normal 
 
 
-
 
NC_008578  Acel_1760  two component LuxR family transcriptional regulator  51.92 
 
 
303 aa  52.8  0.00003  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.887336 
 
 
-
 
NC_013131  Caci_3625  transcriptional regulator, LuxR family  46.43 
 
 
925 aa  52.8  0.00003  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  44.64 
 
 
217 aa  52.4  0.00003  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_013530  Xcel_2194  transcriptional regulator, LuxR family  42.4 
 
 
937 aa  52.8  0.00003  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_1351  response regulator receiver protein  36.28 
 
 
189 aa  52.8  0.00003  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.631825  normal  0.574707 
 
 
-
 
NC_009380  Strop_3824  response regulator receiver  49.06 
 
 
228 aa  52.8  0.00003  Salinispora tropica CNB-440  Bacteria  normal  0.206519  normal 
 
 
-
 
NC_009565  TBFG_10391  LuxR family transcriptional regulator  51.85 
 
 
1085 aa  52.8  0.00003  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.0000000074536  normal 
 
 
-
 
NC_009953  Sare_4559  LuxR family transcriptional regulator  49.09 
 
 
877 aa  52.8  0.00003  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0332938 
 
 
-
 
NC_009953  Sare_4214  two component LuxR family transcriptional regulator  49.06 
 
 
228 aa  52.8  0.00003  Salinispora arenicola CNS-205  Bacteria  normal  0.0601429  normal  0.0532868 
 
 
-
 
NC_013510  Tcur_3614  two component transcriptional regulator, LuxR family  54.72 
 
 
201 aa  52.8  0.00003  Thermomonospora curvata DSM 43183  Bacteria  normal  0.765091  n/a   
 
 
-
 
NC_013595  Sros_9261  ATPase-like protein  50 
 
 
884 aa  52.4  0.00003  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_3390  LuxR family two component transcriptional regulator  48.21 
 
 
228 aa  52.8  0.00003  Thermobispora bispora DSM 43833  Bacteria  normal  0.269937  normal 
 
 
-
 
NC_009664  Krad_3810  two component transcriptional regulator, LuxR family  51.02 
 
 
236 aa  52.8  0.00003  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.225059  normal  0.0261757 
 
 
-
 
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