Gene Sare_4559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_4559 
Symbol 
ID5705417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp5153724 
End bp5156357 
Gene Length2634 bp 
Protein Length877 aa 
Translation table11 
GC content72% 
IMG OID641273971 
ProductLuxR family transcriptional regulator 
Protein accessionYP_001539318 
Protein GI159040065 
COG category[R] General function prediction only 
COG ID[COG3899] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0332938 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTATTTG ATCTTTTTGA TGAACTGCCT CATCCTCTTC TCGAAAGAGA TGTGGAGACC 
CAGTGGATCG AGCGGAAATT GCGGCGGCTT CGCGGTGGCC ATGGTGGTGT ACTGGCCATT
GAGGGATCCG CCGGAACGGG CCGGTCCAGT CTCCTGAAAC TGCTCTATCA ACGAGCGGCC
GAGGCAGGAT TCTGTGTGTT GTACGCCCGG GGGAACGAGT TCGAGGGCGA CGTGCCGTTC
GGAGCCGTCG CCCAGCTGCT GGAACCGGTC CTCCCCGCTC GGATGGTGGA GGAGTCACCG
AGCGTGGCCT CGCCGGCCCT GCTCGGCCGG CTGCGCAGCG ACCTGCTGGA GTGCGCGGGC
GACCGCCGCC TGGTCCTCGT GGTGGACGAC GCCCGCTGGG TGGATGTGCC GTCGCTGCGG
TTCCTGAGCT ATCTGGGTGC TCGCGCCGAA CGCACCCCGG TGCTGCTCGC TGTCGCCCTC
GACCCGGCCG ATCGGGGCTC GGCGGCCGAC TGGCTGGGCA GCGTGAGCAC TTCGCTGGAG
ACGACGCTGC TGCGGCTCGC CCCGCTCAGC GAAGTGGCCA CCCGCCGCCT GGTGTCCGTG
ATGCTCGGGA CGGCGAGCTC GCCGGAGTTC GCCGCAGCCT GCTTCGACGC CACCGGGGGC
AACCCGTTGC TGCTGCACGA GGTGCTGGCG GAGGCCGCCG CTGGCCGCTC AGGATCGCCC
GAGGAGGCGC TGTCCGGACT GTCCCGGCGA CCCCCGGTCC GGGTGATGCG CCAGATGGTG
CGGCGCTTGC AGAGTCTCCC GCGTTCCTCG GTCGCCGTCG CCCGCGCCGT CGCGGTGCTG
GGCGTGGCCG AGGACCCGGT GGTCGTGTCG CGAACCGCGG ACTGCCCCGA GGCGGAGGTC
GACGACGCGG TGACGGTGCT GGTCGACGCC GAGGTGATGA CCGACGGCCC GGCCCTGCGA
TTTGCGCAAC CCATGCTGCG TACCGCCGTG TATGCCGGGA TCCCGGCCTT CCTGCGCGGC
CGCCTGCACG CCCGTGCGGC GCGCGCGCTG GCCGAGACCG GCGCTCCTTC CGAGGCGGTC
GCCGAGCAGC TGGTCAACGT TCCACCCGCC ATGGTTCCCG CGGCGGGCGC CAAGGAGCTG
GCCGAGCCGC GGTCGAGGAA CCGGCGAGCC TCCCGGCACC TGCGCCCGGT CTGGGGCGAG
AACCCGGTGG AGCGCGCGGC GGCGGCGCTG GAGGCCGCCC GGACGCTCAC CCTCGACTGC
CAGTTCGACC GGGCGATCGC GATCCTGGAA GCAGCGATCG CCGACGTGCG CGATCCGGCC
CTCAGCCCGC GGCTGGAGGC GACGGCGGTG TGGATCGCGC AGCTTTCCCC GAGCACCCGG
GGCCGGGGAC GGGCGCGGCT GGATACGCTC GAACGGCCGC ACCTCGCGGA GAAGGCGCTG
CTGGACCAGA TCTGGCGGGG AACGCCGGCC GAACACATCG GACGGCTCAC CGGCGATCTG
CTGCACCGGC CCCGGATCCC GGCCGGCGAC AGCACCGGAT GGAGTGCCGG CCTGGTGGCG
GCCGTGACGC TCGCGCACTT CGACCGGCTC GCCGAAACTC GGCAGGCAGT ACTGACTCTG
CGTGATGCGG CGAGCCAGAC CCACACCACG CTCGCCGGGC TCGACCTGTG CCTGCGGGCC
GCGGTGGACT ACCAGCTGGG GGACATCGCC GGGGCCGGAG ACCTCGCCCT GCAGGTGCTC
TCCGGCACCG ACGGGCAGCG CCCGGCCCGC ATGGTGCAGG CGTTCGCCGG TGCGGTTCGT
GCCGAGACCC TGATCGCGCA GGGCGCGTTG GATGCGGCTG CCGCGATGGT CGAGGAACCG
GGCCTGATCG ACGACTGCGG GTCGGACACT ATCGCCGTCC TTCCGCTGCT GCGCGCCCGC
GGCCATCTGC GGATCGCCCA GGACCGGCTC GAGGAGGGCC TCACCGATCT GCTCCGGGGC
CGCCGGGCCG CTGCCAGCCT GGGACTGACC CCGGGGGCGT GGGTCGGCTG GTCGTCAGCG
GTCACCGCGC TGCACCGGCT CGGGCGTACT GAGGAAGCGC TGTTCATGGC ACGGGAGGAG
CTGGCCGGAG CCCGGTCCTG CGGCGCGCCC GCGCCGCTCG CCGCCGCGCT GCGCACCCTG
GGGCTGCTCA CCCCGGGACC GGCGGCTCTG CCCCTGGTGG AGGAGGCGGC CGGTCTGATG
GAGGACTTCC CGGGGCAGCT GGAGAAGGCC AGGACCCAGC TGACGTACGG GATCATGCTG
CACCGCGTCG GCAAGAGGGC GGCGGCGCGG GAGCAGCTGC GGATGGCTGC CGGGACAAGC
GGCGTCCACG GGGCGCACGT GCTGAACCGC CGCGCCATCG ATGAGCTGCG CTCGATCGAG
GGCGATACCA CGGACCGTCG ATCCCGGACG GTGCTGACTC CCCAGCAGCA GCGGGTGGCC
GAACTCGCCG CCGAGGGCAT GCAGAACGAA GAGATCGCGC AGAAGCTGTT CGTCACGGTG
AAAACCGTCG AGTGGCACCT GACGCAGGCG TACCGCAAGC TCGGCATCGA GTCTCGCACT
GCGCTTTCGC CCGCGCTCGC CGCGACAACC CTGGACTACG CAAAGTCAGC GTGA
 
Protein sequence
MVFDLFDELP HPLLERDVET QWIERKLRRL RGGHGGVLAI EGSAGTGRSS LLKLLYQRAA 
EAGFCVLYAR GNEFEGDVPF GAVAQLLEPV LPARMVEESP SVASPALLGR LRSDLLECAG
DRRLVLVVDD ARWVDVPSLR FLSYLGARAE RTPVLLAVAL DPADRGSAAD WLGSVSTSLE
TTLLRLAPLS EVATRRLVSV MLGTASSPEF AAACFDATGG NPLLLHEVLA EAAAGRSGSP
EEALSGLSRR PPVRVMRQMV RRLQSLPRSS VAVARAVAVL GVAEDPVVVS RTADCPEAEV
DDAVTVLVDA EVMTDGPALR FAQPMLRTAV YAGIPAFLRG RLHARAARAL AETGAPSEAV
AEQLVNVPPA MVPAAGAKEL AEPRSRNRRA SRHLRPVWGE NPVERAAAAL EAARTLTLDC
QFDRAIAILE AAIADVRDPA LSPRLEATAV WIAQLSPSTR GRGRARLDTL ERPHLAEKAL
LDQIWRGTPA EHIGRLTGDL LHRPRIPAGD STGWSAGLVA AVTLAHFDRL AETRQAVLTL
RDAASQTHTT LAGLDLCLRA AVDYQLGDIA GAGDLALQVL SGTDGQRPAR MVQAFAGAVR
AETLIAQGAL DAAAAMVEEP GLIDDCGSDT IAVLPLLRAR GHLRIAQDRL EEGLTDLLRG
RRAAASLGLT PGAWVGWSSA VTALHRLGRT EEALFMAREE LAGARSCGAP APLAAALRTL
GLLTPGPAAL PLVEEAAGLM EDFPGQLEKA RTQLTYGIML HRVGKRAAAR EQLRMAAGTS
GVHGAHVLNR RAIDELRSIE GDTTDRRSRT VLTPQQQRVA ELAAEGMQNE EIAQKLFVTV
KTVEWHLTQA YRKLGIESRT ALSPALAATT LDYAKSA