| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_3610 |
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| Symbol | |
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| ID | 9247479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014210 |
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| Strand | + |
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| Start bp | 4328413 |
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| End bp | 4330935 |
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| Gene Length | 2523 bp |
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| Protein Length | 840 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_003681516 |
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| Protein GI | 297562542 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACCTT TGACCGCGCC CGCGCGGCAC AACCTCCCCC GTCCGGGCAC CGGATTCGTG
GGCCGTGAGC GGGACCTGAG CGACCTGCTC CGTCTGCTCG GCTCCAGCCG CTCCGTCACG
CTGAGCGGAA CCGACGGCCT GGGCAAGACG CGTCTGGCGA TACGCGTGGC CGAGCAGTCC
ACCGCGTGGT TCCCCGACGG CGTGTGGATG GTCGGCATGG CGGACGCGCG CACGACCCTG
GAGGTGTACG CGCGGGTGGC CGCCGCGGTG GGCGTGGTGG AGGAGCCGGG GCAGCCGCTG
TCGGTCACGG TGACCGAGGC ACTGTGCGAA CGCCACCTGC TGCTGGTGCT GGACGCGTGC
GAGCACGCCG TCGAGCAGGT GGCGGAGGTC GGCGAGGCCC TGCTGGCCTC GTGCCCGTCC
GTGTCGATCC TGCTCACCAG CGAGACCCCC GTCCGTCTGT CGGGCGGCAC CGTGTGGCGG
ATGACGCCGA TGGCGCTGCC GCTGCCCGCG CGCAAGGGGC CCCAGCCCGA CCCCGCCGGC
GCGGAGGCGG TGCGTCTGTT CATGGACCGC GCCCGCGCCC GCGACCCGCG CTTCTCGCTC
TCGCGCGAGG AGATGGAGAC CGTGACGGAG CTGTGCGACC TGGCGGGCGG CATCCCGCTG
GCGATCGAGG CGCTGGGCGC GAGCGCGCCC GGGGTGGGGC CCGCTGTACT GGTGGAGGGG
CTGCGCGAGC ACCTGTCCTC CCCCGAGGTC CAGCCCGGCC CGGGGCAGGC GGTCCCGCGC
AGCGAGATGC TGCCGGTGGT GCTGGACTTC GTGTACCGCG GGCTGCCCGA GGCCGAGAGG
GTGCTGCTGC GCCGCCTGTC GGTGTTCCGG GGCTGGAACC TGGAGCTGGC CGAGCAGGTG
TGCGCCGACG AGGCCCTGCC CGAAGCGGAC ATCCTCGACC TCGTGACGTC CCTGCTGAAC
CGCTCCCTGA TCACCGTGAC CGGCGAGTTC GAGGGCCGGG TGCGCTACCG GCTGCCCGAG
GCCGTGCAGC GGTTCGCGCA CTCCCGGCTG GTCGCGGCGG GTGAGGCGGA ACTGTTCCAG
GAGAGGCTCC TGGACCGGAT GCTGCGCCTG GCCGAGGACC TGGGCCAGAA GCTGGAGTCG
AGCCGGGTCA TGCCCTGGAG CGAGCGCGAC TCCGGGCGCC AGCGCGTGAT CGCCGAGTAC
GACACGCTGC GCTCCCTGCT GCGCTGGGCG CTGGAGCACG GCGCCGCCGA ACCGGGCCTG
CGGCTGTGCG TCAGCCTGAC CGCGCACTGG GTGAGCCACC AGAGCTACTC CGAGGGAGCG
CACTGGATGG ACCGCCTGTT GGAGCTGGAG GACGCGGCCA AGGCTCCCTC ACGCGCGCGG
GCGCTGGTGG GTCGGGCCCA GCTGGCGCGG GTGCGGCGCG ACCACGGGCT GGCGGTCTCA
CTGGGCGAGG AGGGCCTGCG GCTGTGCCGC GAGGCCGGGG ACGACGTGTT CGTCCGCGTC
GCGCTCAACC TGCTCGCCCT GGTCGAGGTG CGCGACCGCG TGTCGGACCA GGCCGCGGTG
CGGGTGGAGG AGGCTCTGCG GCTGTGCCGT GAGTCGGGTG ACCTGTGGGG AGAGGCGATC
GCCCTGGGCA CCCGGGCGGC CCTGGTCGCC CAGCAGGGCG ACCATCCCAC GGCCGACCAC
CACTACAACG CCGCGCTGAC GCTGCTGCGC GGGATCGACC ACCGGTGGGG CGTGGGAGTC
ACCCTCATGG GCCAGGCGTA CGCGGCGGAG GCCAGCGGCG ACCTGTTGAC GGCGGACCGC
TGCTACCGGG AGGCGCTGGA CACCCAGCGG CTGATCGGGG CGGCGGCCGA GGAGGCGCGC
TGCCTGGCCG GGATCGGCCG GGTCGCGCAC GCCCAGGGGT CCACGGGACA GGCCTACGAC
TACCTGAGCG AGGGGCTGCT GCTGAGCCAC TCGACGGGCC AGCGCGCGGA CGCGGCGCGC
GCCCTGACCG CGATCGCCCG GGTGGCGTTC GGGGCGGGGC TGCGCGAGGG CTCCTGCCGC
CTGGCGGGCG CGGCGATGAG CGTGCGCGAG CGGCTGGGGC TGTCCACGCA CGAGGCGCCG
TGGCCGTTCA CCGACGTGGA GAAGGTCCGG CGGCGCCGCC GCCAGCTGGT GGGCTGGTGG
GAGCAGGGCC GGACGCTGGC CCTGGCGAAC GCGGTCCGCG AGGGAGAGCA GCTGGCGGAG
GAGGCGCGGC GCCCGCCGTC GCGCCGCTCC GCGCCGCCCA GCCGTCCCGC GCGCGGGCGC
CGGGAGCGGG GAGGGCCCGC CCCGGACCCG GAGTCGGTGA CCCCCGAGGA GCGGCTCACC
CCGCGTGAGC TGGAGGTGGC CCTCCTGGTG AGCCGGGGCA GGAGCAACCC GGAGATCGCC
CGGGAGCTGT TCATCACCCC CTCGACGGCG GCGCGGCACG TGGCCAACAT CAACCGCAAG
ATGGGCTTCC ACTCGCGTAC GCAGATCGCC TCGTGGGTAC GCCACCACCG GAGCTCGGAC
TAA
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| Protein sequence | MAPLTAPARH NLPRPGTGFV GRERDLSDLL RLLGSSRSVT LSGTDGLGKT RLAIRVAEQS
TAWFPDGVWM VGMADARTTL EVYARVAAAV GVVEEPGQPL SVTVTEALCE RHLLLVLDAC
EHAVEQVAEV GEALLASCPS VSILLTSETP VRLSGGTVWR MTPMALPLPA RKGPQPDPAG
AEAVRLFMDR ARARDPRFSL SREEMETVTE LCDLAGGIPL AIEALGASAP GVGPAVLVEG
LREHLSSPEV QPGPGQAVPR SEMLPVVLDF VYRGLPEAER VLLRRLSVFR GWNLELAEQV
CADEALPEAD ILDLVTSLLN RSLITVTGEF EGRVRYRLPE AVQRFAHSRL VAAGEAELFQ
ERLLDRMLRL AEDLGQKLES SRVMPWSERD SGRQRVIAEY DTLRSLLRWA LEHGAAEPGL
RLCVSLTAHW VSHQSYSEGA HWMDRLLELE DAAKAPSRAR ALVGRAQLAR VRRDHGLAVS
LGEEGLRLCR EAGDDVFVRV ALNLLALVEV RDRVSDQAAV RVEEALRLCR ESGDLWGEAI
ALGTRAALVA QQGDHPTADH HYNAALTLLR GIDHRWGVGV TLMGQAYAAE ASGDLLTADR
CYREALDTQR LIGAAAEEAR CLAGIGRVAH AQGSTGQAYD YLSEGLLLSH STGQRADAAR
ALTAIARVAF GAGLREGSCR LAGAAMSVRE RLGLSTHEAP WPFTDVEKVR RRRRQLVGWW
EQGRTLALAN AVREGEQLAE EARRPPSRRS APPSRPARGR RERGGPAPDP ESVTPEERLT
PRELEVALLV SRGRSNPEIA RELFITPSTA ARHVANINRK MGFHSRTQIA SWVRHHRSSD
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