Gene Ndas_3610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3610 
Symbol 
ID9247479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp4328413 
End bp4330935 
Gene Length2523 bp 
Protein Length840 aa 
Translation table11 
GC content75% 
IMG OID 
Producttranscriptional regulator, LuxR family 
Protein accessionYP_003681516 
Protein GI297562542 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACCTT TGACCGCGCC CGCGCGGCAC AACCTCCCCC GTCCGGGCAC CGGATTCGTG 
GGCCGTGAGC GGGACCTGAG CGACCTGCTC CGTCTGCTCG GCTCCAGCCG CTCCGTCACG
CTGAGCGGAA CCGACGGCCT GGGCAAGACG CGTCTGGCGA TACGCGTGGC CGAGCAGTCC
ACCGCGTGGT TCCCCGACGG CGTGTGGATG GTCGGCATGG CGGACGCGCG CACGACCCTG
GAGGTGTACG CGCGGGTGGC CGCCGCGGTG GGCGTGGTGG AGGAGCCGGG GCAGCCGCTG
TCGGTCACGG TGACCGAGGC ACTGTGCGAA CGCCACCTGC TGCTGGTGCT GGACGCGTGC
GAGCACGCCG TCGAGCAGGT GGCGGAGGTC GGCGAGGCCC TGCTGGCCTC GTGCCCGTCC
GTGTCGATCC TGCTCACCAG CGAGACCCCC GTCCGTCTGT CGGGCGGCAC CGTGTGGCGG
ATGACGCCGA TGGCGCTGCC GCTGCCCGCG CGCAAGGGGC CCCAGCCCGA CCCCGCCGGC
GCGGAGGCGG TGCGTCTGTT CATGGACCGC GCCCGCGCCC GCGACCCGCG CTTCTCGCTC
TCGCGCGAGG AGATGGAGAC CGTGACGGAG CTGTGCGACC TGGCGGGCGG CATCCCGCTG
GCGATCGAGG CGCTGGGCGC GAGCGCGCCC GGGGTGGGGC CCGCTGTACT GGTGGAGGGG
CTGCGCGAGC ACCTGTCCTC CCCCGAGGTC CAGCCCGGCC CGGGGCAGGC GGTCCCGCGC
AGCGAGATGC TGCCGGTGGT GCTGGACTTC GTGTACCGCG GGCTGCCCGA GGCCGAGAGG
GTGCTGCTGC GCCGCCTGTC GGTGTTCCGG GGCTGGAACC TGGAGCTGGC CGAGCAGGTG
TGCGCCGACG AGGCCCTGCC CGAAGCGGAC ATCCTCGACC TCGTGACGTC CCTGCTGAAC
CGCTCCCTGA TCACCGTGAC CGGCGAGTTC GAGGGCCGGG TGCGCTACCG GCTGCCCGAG
GCCGTGCAGC GGTTCGCGCA CTCCCGGCTG GTCGCGGCGG GTGAGGCGGA ACTGTTCCAG
GAGAGGCTCC TGGACCGGAT GCTGCGCCTG GCCGAGGACC TGGGCCAGAA GCTGGAGTCG
AGCCGGGTCA TGCCCTGGAG CGAGCGCGAC TCCGGGCGCC AGCGCGTGAT CGCCGAGTAC
GACACGCTGC GCTCCCTGCT GCGCTGGGCG CTGGAGCACG GCGCCGCCGA ACCGGGCCTG
CGGCTGTGCG TCAGCCTGAC CGCGCACTGG GTGAGCCACC AGAGCTACTC CGAGGGAGCG
CACTGGATGG ACCGCCTGTT GGAGCTGGAG GACGCGGCCA AGGCTCCCTC ACGCGCGCGG
GCGCTGGTGG GTCGGGCCCA GCTGGCGCGG GTGCGGCGCG ACCACGGGCT GGCGGTCTCA
CTGGGCGAGG AGGGCCTGCG GCTGTGCCGC GAGGCCGGGG ACGACGTGTT CGTCCGCGTC
GCGCTCAACC TGCTCGCCCT GGTCGAGGTG CGCGACCGCG TGTCGGACCA GGCCGCGGTG
CGGGTGGAGG AGGCTCTGCG GCTGTGCCGT GAGTCGGGTG ACCTGTGGGG AGAGGCGATC
GCCCTGGGCA CCCGGGCGGC CCTGGTCGCC CAGCAGGGCG ACCATCCCAC GGCCGACCAC
CACTACAACG CCGCGCTGAC GCTGCTGCGC GGGATCGACC ACCGGTGGGG CGTGGGAGTC
ACCCTCATGG GCCAGGCGTA CGCGGCGGAG GCCAGCGGCG ACCTGTTGAC GGCGGACCGC
TGCTACCGGG AGGCGCTGGA CACCCAGCGG CTGATCGGGG CGGCGGCCGA GGAGGCGCGC
TGCCTGGCCG GGATCGGCCG GGTCGCGCAC GCCCAGGGGT CCACGGGACA GGCCTACGAC
TACCTGAGCG AGGGGCTGCT GCTGAGCCAC TCGACGGGCC AGCGCGCGGA CGCGGCGCGC
GCCCTGACCG CGATCGCCCG GGTGGCGTTC GGGGCGGGGC TGCGCGAGGG CTCCTGCCGC
CTGGCGGGCG CGGCGATGAG CGTGCGCGAG CGGCTGGGGC TGTCCACGCA CGAGGCGCCG
TGGCCGTTCA CCGACGTGGA GAAGGTCCGG CGGCGCCGCC GCCAGCTGGT GGGCTGGTGG
GAGCAGGGCC GGACGCTGGC CCTGGCGAAC GCGGTCCGCG AGGGAGAGCA GCTGGCGGAG
GAGGCGCGGC GCCCGCCGTC GCGCCGCTCC GCGCCGCCCA GCCGTCCCGC GCGCGGGCGC
CGGGAGCGGG GAGGGCCCGC CCCGGACCCG GAGTCGGTGA CCCCCGAGGA GCGGCTCACC
CCGCGTGAGC TGGAGGTGGC CCTCCTGGTG AGCCGGGGCA GGAGCAACCC GGAGATCGCC
CGGGAGCTGT TCATCACCCC CTCGACGGCG GCGCGGCACG TGGCCAACAT CAACCGCAAG
ATGGGCTTCC ACTCGCGTAC GCAGATCGCC TCGTGGGTAC GCCACCACCG GAGCTCGGAC
TAA
 
Protein sequence
MAPLTAPARH NLPRPGTGFV GRERDLSDLL RLLGSSRSVT LSGTDGLGKT RLAIRVAEQS 
TAWFPDGVWM VGMADARTTL EVYARVAAAV GVVEEPGQPL SVTVTEALCE RHLLLVLDAC
EHAVEQVAEV GEALLASCPS VSILLTSETP VRLSGGTVWR MTPMALPLPA RKGPQPDPAG
AEAVRLFMDR ARARDPRFSL SREEMETVTE LCDLAGGIPL AIEALGASAP GVGPAVLVEG
LREHLSSPEV QPGPGQAVPR SEMLPVVLDF VYRGLPEAER VLLRRLSVFR GWNLELAEQV
CADEALPEAD ILDLVTSLLN RSLITVTGEF EGRVRYRLPE AVQRFAHSRL VAAGEAELFQ
ERLLDRMLRL AEDLGQKLES SRVMPWSERD SGRQRVIAEY DTLRSLLRWA LEHGAAEPGL
RLCVSLTAHW VSHQSYSEGA HWMDRLLELE DAAKAPSRAR ALVGRAQLAR VRRDHGLAVS
LGEEGLRLCR EAGDDVFVRV ALNLLALVEV RDRVSDQAAV RVEEALRLCR ESGDLWGEAI
ALGTRAALVA QQGDHPTADH HYNAALTLLR GIDHRWGVGV TLMGQAYAAE ASGDLLTADR
CYREALDTQR LIGAAAEEAR CLAGIGRVAH AQGSTGQAYD YLSEGLLLSH STGQRADAAR
ALTAIARVAF GAGLREGSCR LAGAAMSVRE RLGLSTHEAP WPFTDVEKVR RRRRQLVGWW
EQGRTLALAN AVREGEQLAE EARRPPSRRS APPSRPARGR RERGGPAPDP ESVTPEERLT
PRELEVALLV SRGRSNPEIA RELFITPSTA ARHVANINRK MGFHSRTQIA SWVRHHRSSD