Gene Xcel_3197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXcel_3197 
Symbol 
ID8650751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylanimonas cellulosilytica DSM 15894 
KingdomBacteria 
Replicon accessionNC_013530 
Strand
Start bp3540782 
End bp3543412 
Gene Length2631 bp 
Protein Length876 aa 
Translation table11 
GC content75% 
IMG OID 
Producttranscriptional regulator, LuxR family 
Protein accessionYP_003327755 
Protein GI269957966 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGACCA TGACCACCCA GGGCAGCCTC CACGCCGACG TGCGCGACGA TGCCGTCAAA 
CATCTGGTGG CGGGCACGAG CGTGGACCTC CAGAGCCTGC CCGGGTCGGG CCGCTCGGTG
CTCACGCAGG CGATCGCGGC CGAGCTGGAG GACTCGGGCT GGCAGGTGAT CCAGGTCCAC
GGCGTCCTCG CGCTGCGGGA GCGGCCGCTG GAGGCGCTCG CCGTCGCCGG GCTCATGGCC
CGGCAGGGCG GCCCGCAGGG TCCGACGACG GCGGTGTCCG CCGCGGTGCA GGGCATCCTC
GGGGCCGTGC GCGGTGGCAG CACCCTGATG GTGGTCGACG ACGTCGACGA CCTCGACGAG
ATCTCCGCGG GCGCCATCGC CGCCGCCCAC ACGATGGCCC GGTTCCCCAT GCTGACGACG
TCGCGGCACA CGCCCCGGGC ACGGCGGGCA CCCCACCGCA TCCCCGTGAC CGTGCAGCCC
GGCGTCACGC TGACCCTGCC CCCGCTCGGC TACGTGGACA CCCAGACGCT GCTGGTCGAG
ACCCTCGGCG GGCCCATCGA CTCGCAGGCC GTGTCGCGGG TGTTCGCGGC GTCGGGCGGG
CTTCCCGGGC TGGCCCTGCC GCTGGTCGCC GGGGCGCGCC AGCACGGCTC CATGCGCCTG
ACCGACGGGG TGTGGACCGC CGGACCGGAC CTCTGGTCGC CCGAGATGAT GCGCGCCGTC
GACCCGCTGC TGCAGCGCCT GAGCCCGGAG GGGATCGACG GGCTGCACGC CCTCTCCCTC
GCCGGCACGG TCGACGTCAC GACGGCGCGG CGGCTGATGT CCTGGGAGGT GCTCGAGGAG
CTCGACGGGT ACCGCCTGCT GCGGTTCGTG CCGCGCGACG ACGAGATGAT CGTCAGCCTG
TTCCCCCTCG CGATCGTCGA GTACTTCCGG CACCTGGGCG TCGGCGCCCG GCACCTGAAG
GTCGACCAGG CCGTCAACCA GGCGTTCGGC GGCGAGCCCG CCTGGCGGGT GCCCGCGGTG
TTCGCGCCGT GGCGCCAGAT CGGCCCCGCC GACGCCGGCG GGCCCGCGCA CCCGCCCATC
GGCACGGCCG GCGAGGCCGA CGTCATCATG AACCGGCTCC TGCACGAGCA CTGGCACCGC
GAGCTGCTGG TGCGACGCAC CGAGTGGGAA CGCACCCCCA CCCCCCGCAC CGCCGCGTCC
CTGCTGCGCA CCATGCTCGT CACGGGCGCC GACGCCGATG CCGTGCTGGC GGTGCGCGAG
GCCACCCCGC GCACCGGGGA CACCCGCGAG CTCGTCGCCT TCGACGACTG GTACGCGCTG
TTCCTCGGCG CCGTCGAGCA CAACATCGAG TGGGTGCACG AGGTGCTGCG CCAGGCCCGC
GAGGAGGCCG ACGAGTGGGT CCGCCTCATC GACGGCATCG AGGCGTTCAT CGTGCTGCTC
GTCGACCACG CCCCGGACCC GGCCTCCCTG CCCGAGATCG CGGCGCTGGA GGGCGAGCCG
ACGGACACGC GCGAGATCGT CGGCATGGCC CGGGCGGAGC TGCTGCTGAC GCAGGGCCGG
TCGACCGAAG GGCTCGAGGC GATCGACGCG CTCGGCCCCG TCACCTCGAC CTTCGCGCTC
GCCCGGGGTG CGTCGCGGCC GTGGGCCCTG CTGCTGGAGG GCAGGCTCGA CGAGGCGCTG
GCCGAGGCGC AGGACCAGCT CGTCGAGGCG CGGCGCGAGC ACAACGTCGA GGGCATCGTG
GGCGCCACCT ACGTGGCGGC GCAGGTGCTC TCGAACCGCG GCCGGTACAC CGAGCTGCGC
AACCTGCTCG GGTCGGTGCT GTCCTCCGGG GTGATCCCGG CGCTCGAACG CACCAAGCAC
GTGGCGCTGC TGTCGATGGC CGCAAACCTG GCCGCCGACG AGGGCCGCGG CACCACCGCT
CGCACGCTCG CCCAGCAGGC GCTCGCGCTG GGCACCGGCC CGGGACCGTA CCCGCTGGGC
TCCCCCACCC AGGCTCTCGC GCGGCTCGAC GGCGCCGACC TCACCCCCCG GCAGGCGCGC
GCCCTGACCG CCGAGCGCCT GTGGGCGGAG TCGCTCGCGC TGCTCGACAA GGGCTACGCC
GTCTCCGGCT ACATCGCCGG CATGCTCGCC GCCATCGAGG AGCCGACGCC GGAGCGCGGC
GCCGCGCTGG CCGAGGTCGC CGCGCGCATC CCGGCGCCGA TCGTCAAGGC GTACGACACG
TTCGTCACCG CGCTGTGCCA GGACGACCCG GAACGGCTGA TCACCGTCGC CGACCGGCAC
GCGGAACTGG GGCTGGTGCG CACGGCCACC ATTGCCTACA CGGCCGGGCT GGCGGCGCTG
CGCGCGTCGG GGGGCGCCGC CCGGGCGGGG CAGGTGCACG AGGACGCCCG GCGCCGGCTC
GAGGTGTGGG GCGACGAGGC CGCCGCGGGG CTGCGCTCGG CCGCCGAGGG GGCCGAGCTC
ACCGCCCGCG AGGACGAGAT CGCGCGGCTC GCGGCGTCGG GCATGACGAA CCAGGACATC
GCGCGGCGCC TGCTGATCTC GGTGCGCACG GTGGAGAACC ACCTGCACCG CGTCTTCCGC
AAGCTGGGTG TGGACAACCG CGCGGAGATG TCGCGGGTCC TGTCGACCTG A
 
Protein sequence
MWTMTTQGSL HADVRDDAVK HLVAGTSVDL QSLPGSGRSV LTQAIAAELE DSGWQVIQVH 
GVLALRERPL EALAVAGLMA RQGGPQGPTT AVSAAVQGIL GAVRGGSTLM VVDDVDDLDE
ISAGAIAAAH TMARFPMLTT SRHTPRARRA PHRIPVTVQP GVTLTLPPLG YVDTQTLLVE
TLGGPIDSQA VSRVFAASGG LPGLALPLVA GARQHGSMRL TDGVWTAGPD LWSPEMMRAV
DPLLQRLSPE GIDGLHALSL AGTVDVTTAR RLMSWEVLEE LDGYRLLRFV PRDDEMIVSL
FPLAIVEYFR HLGVGARHLK VDQAVNQAFG GEPAWRVPAV FAPWRQIGPA DAGGPAHPPI
GTAGEADVIM NRLLHEHWHR ELLVRRTEWE RTPTPRTAAS LLRTMLVTGA DADAVLAVRE
ATPRTGDTRE LVAFDDWYAL FLGAVEHNIE WVHEVLRQAR EEADEWVRLI DGIEAFIVLL
VDHAPDPASL PEIAALEGEP TDTREIVGMA RAELLLTQGR STEGLEAIDA LGPVTSTFAL
ARGASRPWAL LLEGRLDEAL AEAQDQLVEA RREHNVEGIV GATYVAAQVL SNRGRYTELR
NLLGSVLSSG VIPALERTKH VALLSMAANL AADEGRGTTA RTLAQQALAL GTGPGPYPLG
SPTQALARLD GADLTPRQAR ALTAERLWAE SLALLDKGYA VSGYIAGMLA AIEEPTPERG
AALAEVAARI PAPIVKAYDT FVTALCQDDP ERLITVADRH AELGLVRTAT IAYTAGLAAL
RASGGAARAG QVHEDARRRL EVWGDEAAAG LRSAAEGAEL TAREDEIARL AASGMTNQDI
ARRLLISVRT VENHLHRVFR KLGVDNRAEM SRVLST