| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Arth_1221 |
|---|
| Symbol | |
|---|
| ID | 4446284 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Arthrobacter sp. FB24 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008541 |
|---|
| Strand | + |
|---|
| Start bp | 1330600 |
|---|
| End bp | 1333332 |
|---|
| Gene Length | 2733 bp |
|---|
| Protein Length | 910 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639689029 |
|---|
| Product | LuxR family transcriptional regulator |
|---|
| Protein accession | YP_830715 |
|---|
| Protein GI | 116669782 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTTGCAT CACCAGGCTC TGAACATGGC GGGCTGCTGG AGACTGAACG CCGGGGCATG
GGAGCCTCAG AGCGTCGTAA GTGGTCGTCC TTAGTCAGGC AGGACCTCCA GGCCTCCGTC
GTTGCGATCC TTGGCGATAA CGATCTTCAC GGCGTTGTCG TGGCCGGCGC GCAAGGCGTC
GGCAAGTCCA CCTTTGTGCG GGCAGTGGAA GCGCAGCTTG CGGGAAAGAT GCACGTCATC
CACCTGCACG GAACCACCAC CGATCCCGCG ATCCCCTTTG GCCAACTGGC GTTTCTGGTG
GCCCGCCTGC CCGGCAAGGC GCTCGAATCC CCCGGGGAAA TTGTCCACGG CATTTCCCGG
CTGATCCGGG AGGACGCTGC CGGACGCCCA GTCCTTGTAG TGCTCGAGGA CCTGCCAGCG
ATCGACAGCA TGAGCACCGC CGTCCTGATG CACCTCATAC TGAGCGGCGC CGCAAAGCTT
ATGGTCACCG TCCGCAATGT GACGGACATG CCCGAAGACC TGATCCGCCT CCTCCGAAAC
AATTCGCTTG AGGAAGTCCG GCTCGAAGTA TTCACCCGGC CTGAAGTGAG CAAACTGCTT
GCCGGAGTCC TCGGGCGCCC CGTAACTGCC ACCGCGGCCA GTTCGCTGTA CGCAGCGAGC
GGCGGGAATC CGCTGGTCCT CCAGGCTATC GTCATTGAAC AACTTCGTTC CGGTAACCTC
CATCTGGCCG GAAAGGTCTG GGCGCTGAGA GGGGGGATCA ACCTCGCAGA AGCCGACGCC
CTGGTTGACC TGGTCCGGTC CCGGCTGGCA CGGGAGACCC CGAAGGTCAG GGAGGGCCTG
GAGTGGCTGG CCCTGATCCG GAGGGTTCCC CTGTTCGTCC TCCTTGACGT CCTGGACCCG
GCAGTGGTTG CCGATCTCGA AAAGGCCGGG TATCTGCAGG TGGGTGAGAC GGGCCGGCGC
TGGGTGAGCC TTAAGGACGA ATATGTAGGG GAAGTCATCC GGGGCTGGAT GGACCTGCCG
CGCCGCAAGG AGCTGCACCA GCTTGTGGCC AGGGCGGTGG GTGCAACCCC CGCTGAGATG
GATGTCGAAG AGCTCCTCGG CTATGTGGCG TGGACGCTCG ACTGCGGCGA ACCCGTGGAA
CCGGCCTTTG CACTGGCCGC AGCGGCGGCG GCGAACCAGC TGTTCGACCC GATGTTCGCA
CTCGAGTCCC TGGCGCAGAT CCGGGTGGGG GACCCGCACT GGGCGGAGGC AGCCCAGCAG
AGGGCGGCCG CCTACATGAC CCTGGCTGAA CACGAATCGG CCGTGGCCGT CCTGGAAGAA
GTCACGCCCG AGCAGCTGTC TGAACTCCCG GCGACCGCCT ACGCCAGCTA CGTCCAGGAC
TTCTGCAGTG CGCTGCTCTG GATCCACGGG GGATACAGCC GGATCGGCGG CATCCTGTCG
GCGGCCAGGC AGGAGCTGGC ACGCCGGGAG AGGGCCTCCA TCGGCAACGA AACCTCCGCC
GACTTTGCCC GTGCCCATGA GCGGATCAGG CTTGCCGAAT TCGAGCAGAT GATCCATCAG
GGCGAATATG CGGCTGTTGC CGACGACCTG GAGCGGGCCT ACAAGGAAGC CGGCGATCCG
CTGTATGTCT TGAATTGTGC CTGCCTGCTG ACCATGGCCT GGGCAGTCCT GGGCCGGGAA
GCAGACGCCA TCGCCCTGGC GGCCGAGATC CAGCACAGGA TGGAACAGTC CAACGTGGCT
CCGGGGATGC TCAGCTGGCA GGCTGAAGGC CTCTTTGCTG CGCTGCTGTG CAGCGGCCAG
TGGGAGGACT GCGTCAGGAT ACTCACGGAA GCACTGGACC AGAAGCCCAA AATCATGCAG
TATCTCGGCG GGGCCGCCGA ACTCGCTCTC GGTGTGGCCT ACACCTACGC AGGACGTGCC
GACCTCGCCA TCGACACCTT GCTCGGTGCC CAGGCGCAAC TGGAAATCAG GCGGAGCTAC
TATGGTCCGT CCCTTGCCTG CTCAGCGCTT GCCTTCGCTT ATGCCCAGGC CGGCGACATC
CAGGAATCGC GCAACTTCCT GGACCTGGCC GCCCAGGAGG AGCAGCACGT CGCCTGGTTC
ACCTCATGGA TGGCCGACTT CTGCGTCCGG ATGGCCAAAC GGTGGCTCAA GGATCCCGGG
GCCAAGCAAA AGCTGATGGA ATCAGCTCAC GAGGACATTT CCAAAGGGCG GACAACCACT
GCCTCCATCA GCCTTTTCGG TGCTACGGTG CATGGAACAG AGGAAGAACT GGTCCTGCTG
ACCGAAGTTT CCTCTCGTCG GCAAGGAAAA ATGGCCAGCG TCAACCGGCT GGTGGGGGAG
GGGAGCAGAA AGAAGGATTC CAAGGTCCTG CTGGAGGCAG CGTCCGTGGC CCATGAGCTC
CATCTCGATG CGGTGGAGTC CAGATGCGTC GTCCTGGCGC TGGACTTCGC CAGGGAAAAG
GGAGATTCCC AATCCGCACG CGCGGCCCAG CACCGTCTGG ACCGGCTCGT AGAGACGTTG
CCGGTGTTGC CGTTGATGCC GCACACGGTG GGACCGGAAC TGACCGAACG GGAACGGCAG
GTTGCCAGGA TGGCCAGCCA GGGGTTGAGC AACAAGGAAG TCGCCAACCG GCTGCAGCTT
TCCATCCGTA CAGTGGAAGG CCATCTCTAC CAGATCTTCA CGAAAATGGG GATTTCATCG
AGGAGTGAGC TTGAAGGATC CGCTCAAGTC TGA
|
|---|
| Protein sequence | MLASPGSEHG GLLETERRGM GASERRKWSS LVRQDLQASV VAILGDNDLH GVVVAGAQGV
GKSTFVRAVE AQLAGKMHVI HLHGTTTDPA IPFGQLAFLV ARLPGKALES PGEIVHGISR
LIREDAAGRP VLVVLEDLPA IDSMSTAVLM HLILSGAAKL MVTVRNVTDM PEDLIRLLRN
NSLEEVRLEV FTRPEVSKLL AGVLGRPVTA TAASSLYAAS GGNPLVLQAI VIEQLRSGNL
HLAGKVWALR GGINLAEADA LVDLVRSRLA RETPKVREGL EWLALIRRVP LFVLLDVLDP
AVVADLEKAG YLQVGETGRR WVSLKDEYVG EVIRGWMDLP RRKELHQLVA RAVGATPAEM
DVEELLGYVA WTLDCGEPVE PAFALAAAAA ANQLFDPMFA LESLAQIRVG DPHWAEAAQQ
RAAAYMTLAE HESAVAVLEE VTPEQLSELP ATAYASYVQD FCSALLWIHG GYSRIGGILS
AARQELARRE RASIGNETSA DFARAHERIR LAEFEQMIHQ GEYAAVADDL ERAYKEAGDP
LYVLNCACLL TMAWAVLGRE ADAIALAAEI QHRMEQSNVA PGMLSWQAEG LFAALLCSGQ
WEDCVRILTE ALDQKPKIMQ YLGGAAELAL GVAYTYAGRA DLAIDTLLGA QAQLEIRRSY
YGPSLACSAL AFAYAQAGDI QESRNFLDLA AQEEQHVAWF TSWMADFCVR MAKRWLKDPG
AKQKLMESAH EDISKGRTTT ASISLFGATV HGTEEELVLL TEVSSRRQGK MASVNRLVGE
GSRKKDSKVL LEAASVAHEL HLDAVESRCV VLALDFAREK GDSQSARAAQ HRLDRLVETL
PVLPLMPHTV GPELTERERQ VARMASQGLS NKEVANRLQL SIRTVEGHLY QIFTKMGISS
RSELEGSAQV
|
|---|
| |