Gene Sked_35370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_35370 
Symbol 
ID8635170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3950738 
End bp3953383 
Gene Length2646 bp 
Protein Length881 aa 
Translation table11 
GC content73% 
IMG OID 
Productresponse regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
Protein accessionYP_003316259 
Protein GI269796804 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.705533 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.60935 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTTTT CAGCACGAGT CCACCGGCAG ACCAGCGGGC GCGTCCTGTC GCACCTGCGG 
TCCGGCGTCA GCGTCGAGCT CATCGGCCCT CCGGGCTCGG GAAGGTCAGC GCTCGCCGAG
GACGTCCGGA CCACCCTCGC CCGGGAGGGG TACCAGACGC TGGCCGTCCG AGGGCTGCCC
CACCTGCGGG GTCGTCCGCT CGAGGCCTTC TACGTCTCTG GGATCGTCGG GCCGTCTTCG
ACCACGCGCG GGCAGTCGGT CCTGGCCGCG GCGGTGGACT CGCTCACCGC AGTCACCTCG
CGAGGCCCGA CGGTGCTGGT GGTCGACGAT CTCGACGACG TGGACGACAC CACGCTGGGG
GTGCTCAGCG CCGCGCACCA GAGGCTCGGG CATGCCGTCC TCAGCGTCGC CCGACCCTCG
CCCGGAGCAC CGGCCGGTTC ACCCCGGCCG CAGGGCCTGG CCTTCCGCCC GGGAGTGCAG
GAGCGCGTCT CACCCCTGCG GTTCGACGAC GTCCACGCCC TCGTGGTCCA CATGCTGAGC
GGACCTGTCG ACCCAGAGTC CGTCCGTTGG GTCGCACGGA GGTCTGGCGG GCTCGCGGGG
CTCGTCCGCG CCGTCACGGA CAGCGCGCGC CACGACGGTT CTCTCGCGCT GCGCGACGGC
ACCTGGACCG TCCAGCGCCA CCGGTGGTCC CCCCTGCTCT CCGCGGTGGT CGACCGCATG
ACCGAGCACC TCAGCCCGGA GGCCCTCGAA GGGCTTCACA AGCTCTCGCT CGTGGGCAGC
TGCGAGCACA CCACCGCGCG GCTCCTCGTC GGCCCGGAGG TGCTCGAGGA GCTCGACGAC
CGCCAGCTGG TCCACCTGGT CCCGACCGCC GACCACCTCG TCGCGGCCGT CTACCCCCCG
CTCGTCGCAG AGCACTTCCG CAGCTCGAGC GTGAGCGCTC GGCGCACGAG GCTGCTCGAG
GAGATCGTGG AAGCGATGCC GGAGGCGACC CGGGCCTCGG TGGACGAGCT GCACGAGCAT
CTCCCCGCCA CCAGCACCGT GGGCGACGCG CGCAGGTCCG ACCTGGCGAA GACCTCGACC
CGCCAGTCCG ACACGGTCCT CTCCCTGATG CTCGCCGAGC GCAGGTCGAC GACCACCGAG
GAGCACCGCG CAGCGTGGGA GGCTGCGCCG TCGTGGCGGA CCGCGGAGCC GTACCTGCGC
GCGGTGCTGC TCGGCGACCC CGACCTGACC ACCGTCGAGG CCGTCCTGGC GGCCACCCCG
GACGACGGAG ACGTGAGCGC TCTCGTCGAC TGCACGCTGT GGCACGCCCG CAGCCTCGCG
ATCCTGGGCC ACGACCTTCC GGCCGCGGTG CGGCTCCTCG CCGACCTCGA GCCTCGGGCT
GCGGCGCTCG GTGCGTCGGA AGGCGAGCTC TGGAACCTGC GGCTGAGCAG GCTCTGGCTG
GAGACGACCT TCGACCAGGC CTCGCCCGAC CACACCGAGC TCTTGCTCCG GGCCGACCGC
GCCTCCCCCA CCGTCCGTGC GGCCGCCTCG GTGCTCCGCG CCGAGCTGCT GGTCGTCGCG
GGCCGACCGC AGCAGGCGCT CGGCCTGCTG GACGTGGCGA CCGCGGACCG AGACCTCACC
GCGCACCGCG ACGTGGTCCG CGGTCTGGCC CTGGCCCTCT CGGGCGACGT CGACGGGGCT
CTCGCCTGGT CTCGCCGGCA CCTGCACGAG GGCCGGGCGA CCCTCTCGGT CGACCGCCTG
CACGCCCACG CGTACGTCGC CTCGCTCGTG CTGTCCGTCC AGGGCCGCAC GCGCGAGCTC
CGGGAGAACC TCAGCAGCGC CCTGACGCTC GGGGGCTCGC CCGTCACCAT GCGGTACTTC
CAGGCGGGGA ACCTCTCGGT CGCGGCCACC GTCGCCGTGC TCGACGGCCG CCAGGCGACC
GCGGTCGCCC TCGTCGAGGA GATCCAGGCC CTGGGCCTCC CGTCCGGGAA CCTCCCGGCG
ATGAGCCCGG TCTGGACCCG GGCGGCGGTG ACTCACCTCG GAGGCAGCGC AGGAGTCGGA
GGCATGAGCG CGACGCCCGC CGACGACCTG TGGGCAGAGG CCGTGCGCCT CCTGGACCGA
GGGTTCGTGG CGGCCGGGCT CTTCACCGGA GTCGGCGCCG TCGAGCTGAG GCCAGACCCG
GGCTGGGCTC AGCGCCTCGT CTCGGAGGCC GAGGGGACCG ACGGCACTCT CCTCGCAGAC
CTCGCCGACT ACGCGTCAGC GATCTGCTCG ACGGACGCCA CGAGGATGGC TGCCGTCGGC
GACCGCCTCG TCGCAGGCGA CAGACCGCTC TACGGGCTGC GCGCGTACAC GGCGGCCGTC
CGGACCTGGA GGTCTCAGGG GCTGCTCGGG CGGGCGTCTG CGCAGTTCGC CGAGGCCCAG
CAGATCGCGG CCGACCTCGG TCCGGGGTAC CTCGAGCGCC TCGACCACTT CGAGGTCGGG
GCCGACCTCA CCCACCGGGA GCAGGAGGTC GCTCGGCTCG TCTCGCAGGG CTGGACCAAC
CAGGAGATCG CCGACACCCT GGTGCTGAGC GTCCGGACGG TCGAGAACCA CCTGCACCGT
GCGTACCGGA AGGTGGGCGT CGACAACCGG CAAGACCTGT GCGCGGCGCT CACGCTCGAC
GACTGA
 
Protein sequence
MPFSARVHRQ TSGRVLSHLR SGVSVELIGP PGSGRSALAE DVRTTLAREG YQTLAVRGLP 
HLRGRPLEAF YVSGIVGPSS TTRGQSVLAA AVDSLTAVTS RGPTVLVVDD LDDVDDTTLG
VLSAAHQRLG HAVLSVARPS PGAPAGSPRP QGLAFRPGVQ ERVSPLRFDD VHALVVHMLS
GPVDPESVRW VARRSGGLAG LVRAVTDSAR HDGSLALRDG TWTVQRHRWS PLLSAVVDRM
TEHLSPEALE GLHKLSLVGS CEHTTARLLV GPEVLEELDD RQLVHLVPTA DHLVAAVYPP
LVAEHFRSSS VSARRTRLLE EIVEAMPEAT RASVDELHEH LPATSTVGDA RRSDLAKTST
RQSDTVLSLM LAERRSTTTE EHRAAWEAAP SWRTAEPYLR AVLLGDPDLT TVEAVLAATP
DDGDVSALVD CTLWHARSLA ILGHDLPAAV RLLADLEPRA AALGASEGEL WNLRLSRLWL
ETTFDQASPD HTELLLRADR ASPTVRAAAS VLRAELLVVA GRPQQALGLL DVATADRDLT
AHRDVVRGLA LALSGDVDGA LAWSRRHLHE GRATLSVDRL HAHAYVASLV LSVQGRTREL
RENLSSALTL GGSPVTMRYF QAGNLSVAAT VAVLDGRQAT AVALVEEIQA LGLPSGNLPA
MSPVWTRAAV THLGGSAGVG GMSATPADDL WAEAVRLLDR GFVAAGLFTG VGAVELRPDP
GWAQRLVSEA EGTDGTLLAD LADYASAICS TDATRMAAVG DRLVAGDRPL YGLRAYTAAV
RTWRSQGLLG RASAQFAEAQ QIAADLGPGY LERLDHFEVG ADLTHREQEV ARLVSQGWTN
QEIADTLVLS VRTVENHLHR AYRKVGVDNR QDLCAALTLD D