Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_35370 |
Symbol | |
ID | 8635170 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 3950738 |
End bp | 3953383 |
Gene Length | 2646 bp |
Protein Length | 881 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
Protein accession | YP_003316259 |
Protein GI | 269796804 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.705533 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.60935 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTTTTT CAGCACGAGT CCACCGGCAG ACCAGCGGGC GCGTCCTGTC GCACCTGCGG TCCGGCGTCA GCGTCGAGCT CATCGGCCCT CCGGGCTCGG GAAGGTCAGC GCTCGCCGAG GACGTCCGGA CCACCCTCGC CCGGGAGGGG TACCAGACGC TGGCCGTCCG AGGGCTGCCC CACCTGCGGG GTCGTCCGCT CGAGGCCTTC TACGTCTCTG GGATCGTCGG GCCGTCTTCG ACCACGCGCG GGCAGTCGGT CCTGGCCGCG GCGGTGGACT CGCTCACCGC AGTCACCTCG CGAGGCCCGA CGGTGCTGGT GGTCGACGAT CTCGACGACG TGGACGACAC CACGCTGGGG GTGCTCAGCG CCGCGCACCA GAGGCTCGGG CATGCCGTCC TCAGCGTCGC CCGACCCTCG CCCGGAGCAC CGGCCGGTTC ACCCCGGCCG CAGGGCCTGG CCTTCCGCCC GGGAGTGCAG GAGCGCGTCT CACCCCTGCG GTTCGACGAC GTCCACGCCC TCGTGGTCCA CATGCTGAGC GGACCTGTCG ACCCAGAGTC CGTCCGTTGG GTCGCACGGA GGTCTGGCGG GCTCGCGGGG CTCGTCCGCG CCGTCACGGA CAGCGCGCGC CACGACGGTT CTCTCGCGCT GCGCGACGGC ACCTGGACCG TCCAGCGCCA CCGGTGGTCC CCCCTGCTCT CCGCGGTGGT CGACCGCATG ACCGAGCACC TCAGCCCGGA GGCCCTCGAA GGGCTTCACA AGCTCTCGCT CGTGGGCAGC TGCGAGCACA CCACCGCGCG GCTCCTCGTC GGCCCGGAGG TGCTCGAGGA GCTCGACGAC CGCCAGCTGG TCCACCTGGT CCCGACCGCC GACCACCTCG TCGCGGCCGT CTACCCCCCG CTCGTCGCAG AGCACTTCCG CAGCTCGAGC GTGAGCGCTC GGCGCACGAG GCTGCTCGAG GAGATCGTGG AAGCGATGCC GGAGGCGACC CGGGCCTCGG TGGACGAGCT GCACGAGCAT CTCCCCGCCA CCAGCACCGT GGGCGACGCG CGCAGGTCCG ACCTGGCGAA GACCTCGACC CGCCAGTCCG ACACGGTCCT CTCCCTGATG CTCGCCGAGC GCAGGTCGAC GACCACCGAG GAGCACCGCG CAGCGTGGGA GGCTGCGCCG TCGTGGCGGA CCGCGGAGCC GTACCTGCGC GCGGTGCTGC TCGGCGACCC CGACCTGACC ACCGTCGAGG CCGTCCTGGC GGCCACCCCG GACGACGGAG ACGTGAGCGC TCTCGTCGAC TGCACGCTGT GGCACGCCCG CAGCCTCGCG ATCCTGGGCC ACGACCTTCC GGCCGCGGTG CGGCTCCTCG CCGACCTCGA GCCTCGGGCT GCGGCGCTCG GTGCGTCGGA AGGCGAGCTC TGGAACCTGC GGCTGAGCAG GCTCTGGCTG GAGACGACCT TCGACCAGGC CTCGCCCGAC CACACCGAGC TCTTGCTCCG GGCCGACCGC GCCTCCCCCA CCGTCCGTGC GGCCGCCTCG GTGCTCCGCG CCGAGCTGCT GGTCGTCGCG GGCCGACCGC AGCAGGCGCT CGGCCTGCTG GACGTGGCGA CCGCGGACCG AGACCTCACC GCGCACCGCG ACGTGGTCCG CGGTCTGGCC CTGGCCCTCT CGGGCGACGT CGACGGGGCT CTCGCCTGGT CTCGCCGGCA CCTGCACGAG GGCCGGGCGA CCCTCTCGGT CGACCGCCTG CACGCCCACG CGTACGTCGC CTCGCTCGTG CTGTCCGTCC AGGGCCGCAC GCGCGAGCTC CGGGAGAACC TCAGCAGCGC CCTGACGCTC GGGGGCTCGC CCGTCACCAT GCGGTACTTC CAGGCGGGGA ACCTCTCGGT CGCGGCCACC GTCGCCGTGC TCGACGGCCG CCAGGCGACC GCGGTCGCCC TCGTCGAGGA GATCCAGGCC CTGGGCCTCC CGTCCGGGAA CCTCCCGGCG ATGAGCCCGG TCTGGACCCG GGCGGCGGTG ACTCACCTCG GAGGCAGCGC AGGAGTCGGA GGCATGAGCG CGACGCCCGC CGACGACCTG TGGGCAGAGG CCGTGCGCCT CCTGGACCGA GGGTTCGTGG CGGCCGGGCT CTTCACCGGA GTCGGCGCCG TCGAGCTGAG GCCAGACCCG GGCTGGGCTC AGCGCCTCGT CTCGGAGGCC GAGGGGACCG ACGGCACTCT CCTCGCAGAC CTCGCCGACT ACGCGTCAGC GATCTGCTCG ACGGACGCCA CGAGGATGGC TGCCGTCGGC GACCGCCTCG TCGCAGGCGA CAGACCGCTC TACGGGCTGC GCGCGTACAC GGCGGCCGTC CGGACCTGGA GGTCTCAGGG GCTGCTCGGG CGGGCGTCTG CGCAGTTCGC CGAGGCCCAG CAGATCGCGG CCGACCTCGG TCCGGGGTAC CTCGAGCGCC TCGACCACTT CGAGGTCGGG GCCGACCTCA CCCACCGGGA GCAGGAGGTC GCTCGGCTCG TCTCGCAGGG CTGGACCAAC CAGGAGATCG CCGACACCCT GGTGCTGAGC GTCCGGACGG TCGAGAACCA CCTGCACCGT GCGTACCGGA AGGTGGGCGT CGACAACCGG CAAGACCTGT GCGCGGCGCT CACGCTCGAC GACTGA
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Protein sequence | MPFSARVHRQ TSGRVLSHLR SGVSVELIGP PGSGRSALAE DVRTTLAREG YQTLAVRGLP HLRGRPLEAF YVSGIVGPSS TTRGQSVLAA AVDSLTAVTS RGPTVLVVDD LDDVDDTTLG VLSAAHQRLG HAVLSVARPS PGAPAGSPRP QGLAFRPGVQ ERVSPLRFDD VHALVVHMLS GPVDPESVRW VARRSGGLAG LVRAVTDSAR HDGSLALRDG TWTVQRHRWS PLLSAVVDRM TEHLSPEALE GLHKLSLVGS CEHTTARLLV GPEVLEELDD RQLVHLVPTA DHLVAAVYPP LVAEHFRSSS VSARRTRLLE EIVEAMPEAT RASVDELHEH LPATSTVGDA RRSDLAKTST RQSDTVLSLM LAERRSTTTE EHRAAWEAAP SWRTAEPYLR AVLLGDPDLT TVEAVLAATP DDGDVSALVD CTLWHARSLA ILGHDLPAAV RLLADLEPRA AALGASEGEL WNLRLSRLWL ETTFDQASPD HTELLLRADR ASPTVRAAAS VLRAELLVVA GRPQQALGLL DVATADRDLT AHRDVVRGLA LALSGDVDGA LAWSRRHLHE GRATLSVDRL HAHAYVASLV LSVQGRTREL RENLSSALTL GGSPVTMRYF QAGNLSVAAT VAVLDGRQAT AVALVEEIQA LGLPSGNLPA MSPVWTRAAV THLGGSAGVG GMSATPADDL WAEAVRLLDR GFVAAGLFTG VGAVELRPDP GWAQRLVSEA EGTDGTLLAD LADYASAICS TDATRMAAVG DRLVAGDRPL YGLRAYTAAV RTWRSQGLLG RASAQFAEAQ QIAADLGPGY LERLDHFEVG ADLTHREQEV ARLVSQGWTN QEIADTLVLS VRTVENHLHR AYRKVGVDNR QDLCAALTLD D
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