Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcur_1998 |
Symbol | |
ID | 8603325 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermomonospora curvata DSM 43183 |
Kingdom | Bacteria |
Replicon accession | NC_013510 |
Strand | - |
Start bp | 2358400 |
End bp | 2361270 |
Gene Length | 2871 bp |
Protein Length | 956 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | |
Product | transcriptional regulator, LuxR family |
Protein accession | YP_003299603 |
Protein GI | 269126233 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0120259 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGACGGC GTGACATTCT GCGTACCCTC GATCAGGCGC TGGACGCCAC GGCAGGCGGC GCGTTCCGGT TCGTGGCCAT GGAAGGCGAA CCGGGGGCCG GCAAGACCCG GCTGCTGATG GAACTGGCGG AGGCGGCACG GGCCCGCAAG CTGCCCGCGC TGGCCGGCCG GGCGGCCGAG TTCGAACAGG ACATGCCGTT CGGGGCGGTC ATCGACGCCC TGGACGACCA TCTGGAAGAG CACCGGCCCG ACCTCGGCGC GGGGGCGATG CGGCTGCTGG GGACGGTGTT CCCGGCGATG TCCCTGGCGA CGTCCCCGGC GGGCGAGGCG GACCTGGCCG ACCTGACCGG CCTGGCCCGC TACCGGCTGC ACCGGACGAT ACGGCGGCTG CTGGAGGAGC TGGCCGGCCC CGGTGGGCTG GTGGTGATCC TCGACGATGT GCACTGGGCC GACGACGCCT CCATCGAGCT GCTGGACCAC CTGGTGCGCC ACCCGCCGCG GGCGCGGGTG CTGGTGGCGG TGGCCTACCG GCCCGCCCAG GCCGCGCCCC GGCTGGCCAC GCTGGTGGAG ACCGCCGCCG GGCACGGGGT GCGCGTCCCG GTGGGGCCGC TGAGCGAGGC GGAGGCCGCC GAGTTCCTCG GACCGCACGT CAGCGCCGCC CGGCGGGCGG CGCTGTATGC CGCCAGCGGC GGCAACCCCT TCTACCTGGA GGCGCTGGCC CGCATGGACG GCGGCCCCGC CGAGACGGTC GGCGCCCACG CCCCCGACGG GGCGCTGCCG GCCTCCGGCG AGCTGCCGCC GACGGTGCAG GCGGCGCTGC AGGCCGAGCT GAGCGGGCTG CCGGCGCAGG CGCTGCTGGT GGCGCAGGCG GCGGCGGTGG CCGCCGACGA GTTCGAACCG GCGCTGGCGG CGGCCGCCGC CGAGGTGCCC GAGAGCACCG CCCTGCGGGC GGTGGACGAG CTGGCCGCCC GCGACGTGGT GCGCCCGGCC CCCGGCGGCC GGTTCCGCTT CCGCCACCCG CTGGTGCGGC ACGCCACCTA CGAGTCGGCG GCGGCCGGCT GGCGGGTGGG CGTGCACGCC CGCGTCGCCG ACCACCTGGC CCGCCTGGGC GTGCCGGCGA CGGTGCGGGC CCGCCACGTG GAACGCTCGG GCCGCTTCGG CGACCCCGAG GCCATCGCCA CCTTGATCGA GGCCGCCCGC ACGGTGGCCC CGCACGCGCC CGGCACCGCC GCGCACTGGC TCAAGGCCGC CTTGAAACTG ATGCCCGACA GCGACGAGCG GCGCCTGATG CTGCTCGGCG AGCTGGCCAA GATGCAGGCC GTCAGCGGCC AGCTGGCCGA GGGCCGGCAG ACCGCCCGCC AGGTGCTGCA GCTGCTGCCG CCCGACGCGC TGCCGCTGCG GGCCCGCGCC ACCCGGCTGT GCGCCATGAT GGAGCGGCTG CTGGGCCGCC CCCAGGAGGC CCGCGGCATC CTGCTGGCCG AGCTGCGTGC CATGCCCGAC CCCCGCTCGG CCCCGGCGGT GATGCTGCGG CTGCGCCTGG TGGCCGAGAG CCTGATGCGC GGCGACTTCC GCGCCGCCCA GGCCGTGCTG GACCTGGTGC CCGACACCGC CGAGGACTGG GAGCCCAGTT TGACGGTGGC GGTGGCGGCG CTGCGCCCGA TGCCCGCCTA CGCGGGCGAC CTCATCGACG ACGCCCTGCG CCACATCGCG CACGCCGACC GCGTCACCGC CGCCGCCCCC GATGAGCACC TGGCCGAATG GCTGGACGCC GTCACCTGGC TGTGCTGGAC GGAGCTGTTC ATCGGCCGCC ACCGCGACGC GCTGGCCCGC TTCGACCGGG TCCTGAAGGT GGCGCGCTCC ACCGGGCAGA GCTACATCGT GCCCACCGCG CTGGCCGGGC AGGCCCGCGC CTACACCATG GTGGGCCGGC TGGCCGAGGC CGCCACCGCC GCCGAGGAGG CCGCCGCCGT CGCCGACATG CTGCGCTCCG ACCAGCTGAC GGTCTTCGCC CTCACCCAGC GCTGCCTGAT CGCCGCCTGG ACCGGGGACG AGGAGGAGGC TCTGGCCTGG GGGCGGGAGG CGGTGCGCGT CAGCGGCACC AGCAGCGAAT GGTGGAGCCG GCAGGCCCGC TACGCCCAGG CCATGGCCCT GGTGTCCCGC GGGGACACCG CCGCCGGCGC CGAGCTGCTG CGCGAGGTGT GCACCGACAG CGAGGACACC GCCGCCCTCG ACCAGAGCAC CCGGCTGCGG GCCTGCGAGA CGCTGGCCGA CCTGGCCGCC GCCCAAGGCG CGGCCGCCGA GGCCGCCCGC TGGGCCGAGC TGACCGCCCA GACCGCCCAC CCGCAACTGG AGACCAACCT GGCGCTGGCC GACCTGGCCC GCGCGCACGC GCTGCGCCCC ACCGACCCGG CCGCCGCCGC CGAGCACGCC CACCGGGCCG CCGAGGTGCT GCAGGACGCC GGGCACCTGC TGGACGCCGG ACGCGCCCGC CTGCGCGCCG GCACCGCCCA CGCCGACGCC GGCGACCGCG CCAAGGCCCG GGAGCAGCTG CGCGCCGCCG CCGAGATCTT CCGCCGCGCC GGCGCCCGCC CGCTGCACGC CCTGGCCCTG CGCGAGCAGC GGCGGAGCGG GATACGGGTG CCCTCCGGCG GCGGGCGCGG CAGCGGTCCC GGCGGGCTGT CCCCGCGGGA GCTGGAGGTG GCCCGCCTGG TGATGGAGGG CTGCACCAAC CAGCAGATCG CCGAGCGGCT GTTTTTGAGC ATCCGCACCG TGGAGACCCA CCTGTCGAAC ATCTTCGCCA AGCTCGGCGT CGGCTCCCGG GTCGCCATGG TCAGCGCCCT CAGCAAATTG GAGGGCTTCA CCTCCGAGTG A
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Protein sequence | MGRRDILRTL DQALDATAGG AFRFVAMEGE PGAGKTRLLM ELAEAARARK LPALAGRAAE FEQDMPFGAV IDALDDHLEE HRPDLGAGAM RLLGTVFPAM SLATSPAGEA DLADLTGLAR YRLHRTIRRL LEELAGPGGL VVILDDVHWA DDASIELLDH LVRHPPRARV LVAVAYRPAQ AAPRLATLVE TAAGHGVRVP VGPLSEAEAA EFLGPHVSAA RRAALYAASG GNPFYLEALA RMDGGPAETV GAHAPDGALP ASGELPPTVQ AALQAELSGL PAQALLVAQA AAVAADEFEP ALAAAAAEVP ESTALRAVDE LAARDVVRPA PGGRFRFRHP LVRHATYESA AAGWRVGVHA RVADHLARLG VPATVRARHV ERSGRFGDPE AIATLIEAAR TVAPHAPGTA AHWLKAALKL MPDSDERRLM LLGELAKMQA VSGQLAEGRQ TARQVLQLLP PDALPLRARA TRLCAMMERL LGRPQEARGI LLAELRAMPD PRSAPAVMLR LRLVAESLMR GDFRAAQAVL DLVPDTAEDW EPSLTVAVAA LRPMPAYAGD LIDDALRHIA HADRVTAAAP DEHLAEWLDA VTWLCWTELF IGRHRDALAR FDRVLKVARS TGQSYIVPTA LAGQARAYTM VGRLAEAATA AEEAAAVADM LRSDQLTVFA LTQRCLIAAW TGDEEEALAW GREAVRVSGT SSEWWSRQAR YAQAMALVSR GDTAAGAELL REVCTDSEDT AALDQSTRLR ACETLADLAA AQGAAAEAAR WAELTAQTAH PQLETNLALA DLARAHALRP TDPAAAAEHA HRAAEVLQDA GHLLDAGRAR LRAGTAHADA GDRAKAREQL RAAAEIFRRA GARPLHALAL REQRRSGIRV PSGGGRGSGP GGLSPRELEV ARLVMEGCTN QQIAERLFLS IRTVETHLSN IFAKLGVGSR VAMVSALSKL EGFTSE
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