| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3624 |
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| Symbol | |
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| ID | 8334977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 4052012 |
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| End bp | 4054795 |
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| Gene Length | 2784 bp |
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| Protein Length | 927 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644956765 |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_003114368 |
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| Protein GI | 256392804 |
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| COG category | [K] Transcription
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
[COG3899] Predicted ATPase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCACTGG TCGGTCGGGC CGCCGAGACG CGACAGCTCA GAGGCCACAT AGCCAACGTC
CGCGAGAGCG GAATCGCCCT GGTGGTGCGC GGTGAAGCCG GCGTGGGGAA GTCCGCGCTG
CTGGACTACG CGGCCCGGCG CGCCGTGGCA TCCGGGATGC GGGTCCTGAC GACCTCGGGG
GTGCAGAGCG AGACGCATCT TCCCTACGCC GGACTCCAGC AGCTGCTCCG CCCGATCCGG
CATGGGATCG TCCAGATTCC GGACCGCCAG CGTGCGGCAT TGGAGGCGGC GCTCGGTGGC
GCGGACTCGA CCACCCCCGA TGTGTTCCTC GTCGGGCTGG CCGTCCTGAG CCTGATCGCC
GAAGCCGCGG AGACGGCGCC AGTCCTGGTG GTCGTGGAGG ACTCGCACTG GCTGGACCTG
TCCACCTCGC ACGTCCTGGC CTTCGTCGCC CGGCGGCTGG AATCGGAGCC GATCGTCCTG
GTGGCGGCGG CGCGCGAGGG GTTCTTCTCG TCGCTGGCCG GTGCCGAGCT GCCCGAATTG
GTCCTGTCGC CGCTGACCGC CGACGCGGCG GCGACCCTTT TGGACTCCCA CGCGCCCGGC
TTGGATCCGG CGCTGCGCCG CCGGGTGTTG GCTGAGGCCG CGGGCAACCC GCTGGCGTTG
ACCGAACTGC CGGCCACCGC GGCGGCGACA ACCGAGGGCA CGTCGACGCC GACCTTCTGG
ACTCCCCTGA CCGAGCGGCT CGAGCGGGCG TTCACGATCC GCCTGGCCGG GCTCCCGGCA
CTGACCCGCA CGCTGCTTCA GGTCGCGGCG CTGAACGACA GCCCTTCGCT GACCGAGACG
CTGAGTGCCC TGGCGCGCGT CACCGACGGC GACGTCGGCA CTGACGATCT GACGCCGGCG
GTCGCGGCGA AGCTGATCGA AGTGGAGCGC GGCGAAATCC GGTTCCGGCA TCCGCTGATG
CGCTCGGCGA TCCACCAGAG CATGAGCCTG CCGGAGCGTT ACGCGGCCCA CGCCGCGCTG
GCCGACGTCA TCGCCGACCA GGAGGACCGC CGCATCTGGC ACCGCGCGGC GGCCACCGCG
TTGCCCGATG AATCAATCGC CGCCCAGCTC CATGCCGCCG CGGTCGGTGC TGAGCAGCGA
GGCGGAATCG GAGCGGCGGT GATGGCGCTC GACCATGCCG CGCGCCTCAG TCAGGACCCT
GTGTTGCGCG TGGACCGCCT GCTGCGAGCA GCCGAACTCG CGGTCGAGCT GGGCCGCCGC
GAGGTCGTGA CGAAGCTGCT CGACGAAGCC TCGCGCCTGG ATCTGACGAC CCAGCAGCGG
GCCCGGGTGG TGTGGCTGCG CGGGGGATTC GACGAAGGTC TGCGCGGTCG GACCGCCGAC
ACGGGGGTGT TGGCCGAACT CGCCGAGGCG GTCGCCCTCG ACGGTGACCG GGACCTGGCC
ATCCGCATTC TGTGGAGCGC GGCTCAGCGC TGCTTCTGGA CCGAGCCGGG GACCGACGCC
CGGCAGCGGG TCGTCGACGT CGCCGAGAAC CTGATGCGGG ACGAGCAGCT GGACGAGCAC
GACTCGTGGC TGCTGGCGAT CCTCGCCTAC GCAGCTCCCA TCGATCGCGG CGCGGTGGTC
ATCGAGCGGC TGAACCGGAT CGTGGCGACC TCGGGCCACG ACGCCCGGAT GGACCGGATG
CTGGGGACCG GCGCGCTCAT GGTGGGCTCG TTCGACCTGG CCCAGAGGCT GTCGGCCGCC
GCCGCGGCGG GTCTGCGGAC ACAGGGCCGT CTGGGACTGC TCGCCCGCGC GCTCGGGGCT
GAGGCCTCCA GCGCCGTGCA GCTCGGCGAC CTGAGCGTGG CCATCCCCGC CGCTGAGGAA
TCTGGCCGAT TGGCGCGCGA GACGACCCAG CCGTACCTGC ACGGTCTGGT ACGAGCCATC
GAGGCGGCGA TCGCGGCACT GCGCGGGGAA CAGGCTCGGG TCCAGACGCT GACGGCCGAA
GCCGAACAGG CCGGGCTCCC GGTCGGGGCG CGGCCGGTCC TGGCCCGGAC ACAGATGGCG
CGCGGGCTGG CGGCGCTGGG CGCGGGGCGG TTCGACGAGG CGTATACGCA GCTGCGTCGC
CTGCACGATC CGGCCGACCC CTGCTACCAG GTGGCGCTGC GCTGCTTCGC TATCGCGGAT
CTGGTCGACG CGGCTGCGCA CTGCGGTCAG GGCGCGGCTG TCGCGCAGAT CATGCGGGAG
ATGGAGGCCG CCGCGCTGAA GACCCCCTCT CCGGTTCTGC ACGCCGGTCT TCGCTTCGCC
CGAGCGCTCC TGGCCGATGA TTCCGAGGCC GAACAGCTGT ATACGGCCGC GTTGAGCGCC
GATCTGGCGG GCTGGCCGTT CATCCGGGCG CGCACGCAGT TGGCGTACGG CGCGTGGCTG
CGCCGCCAGC GAAGGGCTGC TGATTCCCGC CCTCATTTGC GCGCCGCCCG GGAGACGTTC
GACGCGCTGG GCGTCATCCC ATGGAGCGAT CGCGCGCGTC GGGAGCTCAG AGCCTCCGGC
GAGACGAGCC GCAGCCGCAG TCTCGACGCC CGCGATCAGC TCACGCCGCA AGAGCTCCAG
ATCGCGCAGA TGGCCGCCGG CGGTCTGACG AACCGCGAGA TCGGCCAGAA GCTCTACCTC
TCCCACCGGA CGGTCAGCTC GCACCTGCAC CGGATCTTCC CCAAACTGGG CGTCGCGTCG
CGCTCCGAAC TCGCCTCGAT GCTCCACCTG GTCCCTGACC TGGGCGAAAG CGGTGCGGGC
GAGAGCGGAA GCACCGTCAC ATGA
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| Protein sequence | MALVGRAAET RQLRGHIANV RESGIALVVR GEAGVGKSAL LDYAARRAVA SGMRVLTTSG
VQSETHLPYA GLQQLLRPIR HGIVQIPDRQ RAALEAALGG ADSTTPDVFL VGLAVLSLIA
EAAETAPVLV VVEDSHWLDL STSHVLAFVA RRLESEPIVL VAAAREGFFS SLAGAELPEL
VLSPLTADAA ATLLDSHAPG LDPALRRRVL AEAAGNPLAL TELPATAAAT TEGTSTPTFW
TPLTERLERA FTIRLAGLPA LTRTLLQVAA LNDSPSLTET LSALARVTDG DVGTDDLTPA
VAAKLIEVER GEIRFRHPLM RSAIHQSMSL PERYAAHAAL ADVIADQEDR RIWHRAAATA
LPDESIAAQL HAAAVGAEQR GGIGAAVMAL DHAARLSQDP VLRVDRLLRA AELAVELGRR
EVVTKLLDEA SRLDLTTQQR ARVVWLRGGF DEGLRGRTAD TGVLAELAEA VALDGDRDLA
IRILWSAAQR CFWTEPGTDA RQRVVDVAEN LMRDEQLDEH DSWLLAILAY AAPIDRGAVV
IERLNRIVAT SGHDARMDRM LGTGALMVGS FDLAQRLSAA AAAGLRTQGR LGLLARALGA
EASSAVQLGD LSVAIPAAEE SGRLARETTQ PYLHGLVRAI EAAIAALRGE QARVQTLTAE
AEQAGLPVGA RPVLARTQMA RGLAALGAGR FDEAYTQLRR LHDPADPCYQ VALRCFAIAD
LVDAAAHCGQ GAAVAQIMRE MEAAALKTPS PVLHAGLRFA RALLADDSEA EQLYTAALSA
DLAGWPFIRA RTQLAYGAWL RRQRRAADSR PHLRAARETF DALGVIPWSD RARRELRASG
ETSRSRSLDA RDQLTPQELQ IAQMAAGGLT NREIGQKLYL SHRTVSSHLH RIFPKLGVAS
RSELASMLHL VPDLGESGAG ESGSTVT
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