More than 300 homologs were found in PanDaTox collection
for query gene Reut_B3663 on replicon NC_007348
Organism: Ralstonia eutropha JMP134



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007348  Reut_B3663  Short-chain dehydrogenase/reductase SDR  100 
 
 
270 aa  549  1e-155  Ralstonia eutropha JMP134  Bacteria  normal  0.712953  n/a   
 
 
-
 
NC_007974  Rmet_3982  putative short-chain dehydrogenase/reductase  82.22 
 
 
270 aa  436  1e-121  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.0102992 
 
 
-
 
NC_007908  Rfer_0646  short-chain dehydrogenase/reductase SDR  47.88 
 
 
256 aa  255  4e-67  Rhodoferax ferrireducens T118  Bacteria  normal  0.965194  n/a   
 
 
-
 
NC_013595  Sros_7224  short-chain dehydrogenase/reductase SDR  52.61 
 
 
263 aa  254  1.0000000000000001e-66  Streptosporangium roseum DSM 43021  Bacteria  normal  0.542402  normal  0.392428 
 
 
-
 
NC_009485  BBta_6672  putative short-chain dehydrogenase/reductase  50.91 
 
 
264 aa  253  3e-66  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.157918  normal 
 
 
-
 
NC_011004  Rpal_1774  short-chain dehydrogenase/reductase SDR  48.36 
 
 
266 aa  248  7e-65  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4268  short-chain dehydrogenase/reductase SDR  50 
 
 
269 aa  244  1.9999999999999999e-63  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.52559  normal  0.660743 
 
 
-
 
NC_014165  Tbis_2447  short-chain dehydrogenase/reductase SDR  53.17 
 
 
264 aa  241  1e-62  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.115187 
 
 
-
 
NC_009380  Strop_2915  short-chain dehydrogenase/reductase SDR  50.38 
 
 
318 aa  230  2e-59  Salinispora tropica CNB-440  Bacteria  normal  0.718315  normal 
 
 
-
 
NC_013159  Svir_16720  short-chain dehydrogenase of unknown substrate specificity  50.64 
 
 
263 aa  229  4e-59  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_1642  short-chain dehydrogenase/reductase SDR  48.3 
 
 
295 aa  229  4e-59  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.347777 
 
 
-
 
NC_014210  Ndas_2919  short-chain dehydrogenase/reductase SDR  48.11 
 
 
258 aa  226  3e-58  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.236452 
 
 
-
 
NC_008010  Dgeo_2398  short-chain dehydrogenase/reductase SDR  47.33 
 
 
269 aa  224  2e-57  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.0863327  n/a   
 
 
-
 
NC_009338  Mflv_4800  short-chain dehydrogenase/reductase SDR  46.99 
 
 
269 aa  219  5e-56  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.654543  normal 
 
 
-
 
NC_009953  Sare_3115  short-chain dehydrogenase/reductase SDR  48.11 
 
 
263 aa  219  5e-56  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0100122 
 
 
-
 
NC_008699  Noca_3864  short-chain dehydrogenase/reductase SDR  50 
 
 
272 aa  218  1e-55  Nocardioides sp. JS614  Bacteria  normal  0.239967  n/a   
 
 
-
 
NC_014148  Plim_2248  short-chain dehydrogenase/reductase SDR  40.61 
 
 
264 aa  215  5e-55  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_0065  short-chain dehydrogenase/reductase SDR  50.74 
 
 
266 aa  208  7e-53  Gordonia bronchialis DSM 43247  Bacteria  normal  0.305038  n/a   
 
 
-
 
NC_007778  RPB_3939  short-chain dehydrogenase/reductase SDR  46.27 
 
 
266 aa  207  1e-52  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0544906  normal 
 
 
-
 
NC_007958  RPD_3700  short-chain dehydrogenase/reductase SDR  46.12 
 
 
267 aa  207  2e-52  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.209869  normal 
 
 
-
 
NC_007333  Tfu_0361  short chain dehydrogenase/reductase family oxidoreductase  45.85 
 
 
264 aa  201  9.999999999999999e-51  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1829  short-chain dehydrogenase/reductase SDR  45 
 
 
265 aa  199  5e-50  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_1268  short-chain dehydrogenase/reductase SDR  42.75 
 
 
263 aa  196  3e-49  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1285  short-chain dehydrogenase/reductase SDR  42.75 
 
 
263 aa  196  3e-49  Mycobacterium sp. KMS  Bacteria  normal  0.428856  normal  0.173588 
 
 
-
 
NC_009077  Mjls_1294  short-chain dehydrogenase/reductase SDR  42.65 
 
 
263 aa  194  1e-48  Mycobacterium sp. JLS  Bacteria  normal  0.625854  normal  0.126067 
 
 
-
 
NC_010505  Mrad2831_1821  short-chain dehydrogenase/reductase SDR  47.03 
 
 
258 aa  183  3e-45  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.748  normal  0.0174696 
 
 
-
 
NC_013947  Snas_2914  short-chain dehydrogenase/reductase SDR  44.67 
 
 
258 aa  182  6e-45  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0109588  hitchhiker  0.00528047 
 
 
-
 
NC_008347  Mmar10_1652  short-chain dehydrogenase/reductase SDR  40.82 
 
 
263 aa  175  7e-43  Maricaulis maris MCS10  Bacteria  normal  normal  0.406649 
 
 
-
 
NC_009921  Franean1_6390  short-chain dehydrogenase/reductase SDR  37.5 
 
 
253 aa  160  2e-38  Frankia sp. EAN1pec  Bacteria  normal  0.561861  normal  0.0707299 
 
 
-
 
NC_009921  Franean1_3282  short-chain dehydrogenase/reductase SDR  35.06 
 
 
268 aa  152  5.9999999999999996e-36  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_2647  3-ketoacyl-(acyl-carrier-protein) reductase  36.92 
 
 
252 aa  132  7.999999999999999e-30  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.0000389723  n/a   
 
 
-
 
NC_013440  Hoch_5364  short-chain dehydrogenase/reductase SDR  35.63 
 
 
267 aa  129  7.000000000000001e-29  Haliangium ochraceum DSM 14365  Bacteria  normal  0.676071  normal 
 
 
-
 
NC_007973  Rmet_3599  short-chain dehydrogenase/reductase SDR  34.27 
 
 
296 aa  125  6e-28  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_2203  short chain dehydrogenase  31.58 
 
 
273 aa  125  6e-28  Marinobacter aquaeolei VT8  Bacteria  decreased coverage  0.000419362  n/a   
 
 
-
 
NC_013037  Dfer_1833  short-chain dehydrogenase/reductase SDR  36.41 
 
 
263 aa  125  7e-28  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.50771  normal 
 
 
-
 
NC_009457  VC0395_A1193  short chain dehydrogenase/reductase family oxidoreductase  39.06 
 
 
252 aa  124  2e-27  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_0783  short-chain dehydrogenase/reductase SDR  41.75 
 
 
298 aa  124  2e-27  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009379  Pnuc_0214  short-chain dehydrogenase/reductase SDR  37.63 
 
 
245 aa  123  3e-27  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_21900  short-chain dehydrogenase of unknown substrate specificity  39.13 
 
 
272 aa  123  4e-27  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.509976  normal 
 
 
-
 
NC_011898  Ccel_2089  short-chain dehydrogenase/reductase SDR  37.04 
 
 
246 aa  122  5e-27  Clostridium cellulolyticum H10  Bacteria  normal  0.0163129  n/a   
 
 
-
 
NC_013526  Tter_2773  short-chain dehydrogenase/reductase SDR  35.68 
 
 
253 aa  121  9.999999999999999e-27  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_5625  short-chain dehydrogenase/reductase SDR  36.6 
 
 
309 aa  121  9.999999999999999e-27  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.285502  normal 
 
 
-
 
NC_007435  BURPS1710b_A2524  short chain dehydrogenase  37.11 
 
 
308 aa  121  9.999999999999999e-27  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_3491  short-chain dehydrogenase/reductase SDR  37.95 
 
 
254 aa  121  9.999999999999999e-27  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.749829  normal 
 
 
-
 
NC_009078  BURPS1106A_A1269  short chain dehydrogenase/reductase family oxidoreductase  37.11 
 
 
308 aa  121  9.999999999999999e-27  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A1008  short chain dehydrogenase  37.11 
 
 
308 aa  121  9.999999999999999e-27  Burkholderia mallei NCTC 10247  Bacteria  normal  0.388516  n/a   
 
 
-
 
NC_008061  Bcen_3693  short-chain dehydrogenase/reductase SDR  36.6 
 
 
309 aa  121  9.999999999999999e-27  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_0559  short-chain dehydrogenase/reductase SDR  37.11 
 
 
308 aa  121  9.999999999999999e-27  Burkholderia mallei NCTC 10229  Bacteria  normal  0.0827865  n/a   
 
 
-
 
NC_008543  Bcen2424_4675  short-chain dehydrogenase/reductase SDR  36.6 
 
 
309 aa  121  9.999999999999999e-27  Burkholderia cenocepacia HI2424  Bacteria  normal  0.396312  normal  0.215379 
 
 
-
 
NC_009075  BURPS668_A1346  short chain dehydrogenase/reductase family oxidoreductase  37.11 
 
 
308 aa  121  9.999999999999999e-27  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_010086  Bmul_4018  short-chain dehydrogenase/reductase SDR  36.08 
 
 
312 aa  120  1.9999999999999998e-26  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.169146  normal  0.55969 
 
 
-
 
NC_007511  Bcep18194_B1144  Short-chain dehydrogenase/reductase SDR  35.57 
 
 
307 aa  120  1.9999999999999998e-26  Burkholderia sp. 383  Bacteria  normal  0.151567  normal  0.117156 
 
 
-
 
NC_009565  TBFG_10868  short chain dehydrogenase  32.82 
 
 
275 aa  120  1.9999999999999998e-26  Mycobacterium tuberculosis F11  Bacteria  normal  hitchhiker  0.00362326 
 
 
-
 
NC_010552  BamMC406_4527  short-chain dehydrogenase/reductase SDR  36.08 
 
 
311 aa  120  3e-26  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.207166 
 
 
-
 
NC_007650  BTH_II1472  short chain dehydrogenase  38.14 
 
 
315 aa  120  3e-26  Burkholderia thailandensis E264  Bacteria  normal  0.730562  n/a   
 
 
-
 
NC_008009  Acid345_0642  short-chain dehydrogenase/reductase SDR  34.71 
 
 
252 aa  120  3e-26  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.220005 
 
 
-
 
NC_008391  Bamb_4069  short-chain dehydrogenase/reductase SDR  36.6 
 
 
312 aa  120  3e-26  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.596903 
 
 
-
 
NC_008726  Mvan_3997  short-chain dehydrogenase/reductase SDR  38.12 
 
 
253 aa  120  3e-26  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.895675 
 
 
-
 
NC_013510  Tcur_1562  short-chain dehydrogenase/reductase SDR  35.12 
 
 
275 aa  119  3.9999999999999996e-26  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0498761  n/a   
 
 
-
 
NC_011138  MADE_01992  short chain dehydrogenase  31.82 
 
 
276 aa  119  4.9999999999999996e-26  Alteromonas macleodii 'Deep ecotype'  Bacteria  unclonable  0.00000620206  n/a   
 
 
-
 
NC_011831  Cagg_2751  short-chain dehydrogenase/reductase SDR  40.84 
 
 
252 aa  119  7e-26  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.995251  normal 
 
 
-
 
NC_013132  Cpin_5999  short-chain dehydrogenase/reductase SDR  35.38 
 
 
263 aa  119  7e-26  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_4205  short chain dehydrogenase/reductase family oxidoreductase  33.99 
 
 
264 aa  118  7.999999999999999e-26  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_1966  short-chain dehydrogenase/reductase SDR  33.51 
 
 
254 aa  117  9.999999999999999e-26  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_3967  short-chain dehydrogenase/reductase SDR  33.49 
 
 
264 aa  117  1.9999999999999998e-25  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0321162  n/a   
 
 
-
 
NC_009972  Haur_0974  short-chain dehydrogenase/reductase SDR  33.5 
 
 
254 aa  117  3e-25  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_1946  short chain dehydrogenase/reductase family oxidoreductase  36.79 
 
 
262 aa  117  3e-25  Pseudomonas putida KT2440  Bacteria  normal  unclonable  0.000000538802 
 
 
-
 
NC_013595  Sros_6830  oxidoreductase  35.56 
 
 
265 aa  117  3e-25  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.356358 
 
 
-
 
NC_005957  BT9727_3881  oxidoreductase, short-chain dehydrogenase/reductase  33.99 
 
 
264 aa  116  3e-25  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_0346  short-chain dehydrogenase/reductase SDR  35.15 
 
 
256 aa  116  3e-25  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0244456  n/a   
 
 
-
 
NC_011773  BCAH820_4158  oxidoreductase, short-chain dehydrogenase/reductase family  33.5 
 
 
264 aa  116  3e-25  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_012856  Rpic12D_2582  short chain dehydrogenase  40.31 
 
 
269 aa  116  3.9999999999999997e-25  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_2457  short-chain dehydrogenase/reductase SDR  34.67 
 
 
291 aa  116  3.9999999999999997e-25  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0300911  n/a   
 
 
-
 
NC_005945  BAS4042  short chain dehydrogenase/reductase family oxidoreductase  33 
 
 
264 aa  115  6e-25  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007336  Reut_C6404  3-oxoacyl-[acyl-carrier-protein] reductase  36.41 
 
 
246 aa  115  6e-25  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_4357  short chain dehydrogenase/reductase family oxidoreductase  33 
 
 
264 aa  115  6e-25  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A4268  oxidoreductase, short-chain dehydrogenase/reductase family  33 
 
 
264 aa  115  6e-25  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B0992  oxidoreductase, short-chain dehydrogenase/reductase family  33.99 
 
 
264 aa  115  6.9999999999999995e-25  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_0158  short-chain dehydrogenase/reductase SDR  33.2 
 
 
271 aa  115  7.999999999999999e-25  Marinobacter aquaeolei VT8  Bacteria  normal  0.722445  n/a   
 
 
-
 
NC_013739  Cwoe_3930  short-chain dehydrogenase/reductase SDR  41.03 
 
 
255 aa  115  8.999999999999998e-25  Conexibacter woesei DSM 14684  Bacteria  normal  0.271838  normal 
 
 
-
 
NC_007005  Psyr_3753  short chain dehydrogenase  31.73 
 
 
294 aa  114  1.0000000000000001e-24  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.0637159 
 
 
-
 
NC_007492  Pfl01_4194  short chain dehydrogenase  39 
 
 
253 aa  114  1.0000000000000001e-24  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.896625 
 
 
-
 
NC_007778  RPB_3027  Short-chain dehydrogenase/reductase  38.5 
 
 
259 aa  114  1.0000000000000001e-24  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.730472  normal 
 
 
-
 
NC_009767  Rcas_0104  short-chain dehydrogenase/reductase SDR  36.41 
 
 
246 aa  115  1.0000000000000001e-24  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.650868  normal 
 
 
-
 
NC_009719  Plav_0391  short-chain dehydrogenase/reductase SDR  37.22 
 
 
279 aa  114  1.0000000000000001e-24  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.319463  normal 
 
 
-
 
NC_006274  BCZK3889  short chain dehydrogenase/reductase family oxidoreductase  32.51 
 
 
264 aa  114  2.0000000000000002e-24  Bacillus cereus E33L  Bacteria  normal  0.674087  n/a   
 
 
-
 
NC_010531  Pnec_0235  short-chain dehydrogenase/reductase SDR  34.54 
 
 
244 aa  114  2.0000000000000002e-24  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A4244  oxidoreductase, short-chain dehydrogenase/reductase family  33.5 
 
 
264 aa  114  2.0000000000000002e-24  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_2317  short-chain dehydrogenase/reductase SDR  37.63 
 
 
263 aa  113  3e-24  Thermobispora bispora DSM 43833  Bacteria  normal  0.49068  normal  0.325129 
 
 
-
 
NC_013743  Htur_2798  short-chain dehydrogenase/reductase SDR  36.67 
 
 
256 aa  113  3e-24  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_009636  Smed_2462  short chain dehydrogenase  38.89 
 
 
254 aa  113  4.0000000000000004e-24  Sinorhizobium medicae WSM419  Bacteria  normal  0.131471  normal 
 
 
-
 
NC_008463  PA14_21640  short chain dehydrogenase  34.27 
 
 
270 aa  112  5e-24  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_1627  oxidoreductase, short chain dehydrogenase/reductase family  31.78 
 
 
271 aa  112  6e-24  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0861444  n/a   
 
 
-
 
NC_010322  PputGB1_1337  short chain dehydrogenase  33.07 
 
 
269 aa  112  6e-24  Pseudomonas putida GB-1  Bacteria  normal  normal  0.950533 
 
 
-
 
NC_013037  Dfer_2713  short-chain dehydrogenase/reductase SDR  36.13 
 
 
266 aa  112  7.000000000000001e-24  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_0631  short-chain dehydrogenase/reductase SDR  36.92 
 
 
265 aa  112  7.000000000000001e-24  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.76513  n/a   
 
 
-
 
NC_008463  PA14_44570  putative short-chain dehydrogenase  36.92 
 
 
295 aa  112  7.000000000000001e-24  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.30545 
 
 
-
 
NC_002947  PP_1745  short chain dehydrogenase  32.81 
 
 
269 aa  112  8.000000000000001e-24  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_012803  Mlut_09850  short-chain dehydrogenase of unknown substrate specificity  38.53 
 
 
297 aa  112  8.000000000000001e-24  Micrococcus luteus NCTC 2665  Bacteria  normal  0.414551  n/a   
 
 
-
 
NC_007412  Ava_C0109  short chain dehydrogenase  33.83 
 
 
251 aa  112  9e-24  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
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