Gene Mvan_3997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3997 
Symbol 
ID4647606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp4273012 
End bp4273773 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content67% 
IMG OID639807459 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_954780 
Protein GI120404951 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.895675 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATGATC GCTATATCGA CACCACGGTG CTGGTGACCG GTGCGGCCTC CGGTATCGGC 
CGTGCGATCG CGTTCGCAGC GGCGCGCGAG GGCGCCAGAC TCATCCTCGG CGACATCACC
GTCGACAGAT TGGCCGACGC CGCCGAGGAA CTGAGGGCGC GCGGCGCTCA AGTCGTGCAT
GCCCGATGCG ACATCACGAG CACCGCGGAC CTCGAGAGCC TCGTTCAGCG GGGATCACAC
GAGCTCGGGC CGGTCGATGT CGCGTTCGCC AACGCCGGCG TCCTCGGCTC ACCGGGGGAT
GTCTGGTCCT ACTCCGAGGA CGAGTTCACC CGGATTCTCG ACATCAATGT CACCGGCACC
TGGAGGACCG TCCGCGCGGT ATTGCCCGCC ATGATCGAGA GACGCCGGGG AATCATCGTC
GCCACCGCGT CTGCGGCGGG GCTGATCGGG CCGGCCGGTC TTCCTGCCTA CGTCGCGAGC
AAGCACGCCG TCGTCGGGCT GGTGAAGTCG ACGGCCATGA ATGTCGCGGC GCACGGTATC
CGGGTGAACG CGCTGTGCCC CCACATGGTC GACACGCCGA TGCTCGACAA GGTGAGTCAC
GAGATCCCCG GCCTTCGAGA GTCGTTGGAC CAGCAGACAC CGCTCGGACG GGTGGCCACC
TCTGAGGAGG TCGCGCGCTC CGCGCTCTGG CTCGGATCGG ATGAGTCCAG TTTCGTGACC
GGGCACGCGC TGCTCGTAGA CGGCGGTCTG GTGGCGCAGT AG
 
Protein sequence
MDDRYIDTTV LVTGAASGIG RAIAFAAARE GARLILGDIT VDRLADAAEE LRARGAQVVH 
ARCDITSTAD LESLVQRGSH ELGPVDVAFA NAGVLGSPGD VWSYSEDEFT RILDINVTGT
WRTVRAVLPA MIERRRGIIV ATASAAGLIG PAGLPAYVAS KHAVVGLVKS TAMNVAAHGI
RVNALCPHMV DTPMLDKVSH EIPGLRESLD QQTPLGRVAT SEEVARSALW LGSDESSFVT
GHALLVDGGL VAQ