| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0214 |
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| Symbol | |
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| ID | 5053851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 212253 |
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| End bp | 212990 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640470366 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001154999 |
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| Protein GI | 145588402 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGGCG ATAGATTAAA AGACAAGATA GCGATTGTTA CTGGTGCTGC AAAGGGTATC
GGTTTTGCTA CAGCTCTGCG TTTTGCACAA GAGGGCGCCA AGGTAATGAT TGCTGATATC
AATCTAGAGG CCGTTAAGGG TGCAGCTGCA AAAATACCGA ATGCGGAAGC TTATGCAATG
AATGTGACGG ATCGTGCCAG CATTCAAGCC ACCGTTGGTG AGATCATGCA GCGTCATGGG
CGAATTGATA TTCTCATTAA TAACGCCGGT ATCACTCAGG ATGCGCGCTT GATTAAGATG
ACAGAAGCGC AATTTGACAC GGTGATTGAT GTCAATTTAA AAGGTGTATT TAATTGCACT
CAATTAGTAG TCCCGCATAT GTTGGAGGCT GGCTCTGGAG CTATTGTGAA TGCATCTAGC
GTAGTTGGGC TATACGGAAA TTTTGGCCAA ACCAATTATT CAGCAACTAA ATTTGGTGTG
ATTGGCTTTA CAAAAACCTG GGCGCGCGAG TTAGGCCCTA AGGGTATACG GGTGAATGCT
GTCTGCCCTG GATTTATTGC CACAGAAATG GTGAAGGCTA TGCCAGAAAA TATCCTTCAG
GATATCGAGC GCCGCAGCTG GCTTGGTCGT TTGGGTACAC CAGAAGAAAT GGCAAACGTA
TACCTATTTT TGGCAAGCGA TGAGGCAAGC TACGTTAACG GAGTTGCATT AGAGGCTAGC
GGCGGGATCT CCCTCTAA
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| Protein sequence | MMGDRLKDKI AIVTGAAKGI GFATALRFAQ EGAKVMIADI NLEAVKGAAA KIPNAEAYAM
NVTDRASIQA TVGEIMQRHG RIDILINNAG ITQDARLIKM TEAQFDTVID VNLKGVFNCT
QLVVPHMLEA GSGAIVNASS VVGLYGNFGQ TNYSATKFGV IGFTKTWARE LGPKGIRVNA
VCPGFIATEM VKAMPENILQ DIERRSWLGR LGTPEEMANV YLFLASDEAS YVNGVALEAS
GGISL
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