Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_21640 |
Symbol | |
ID | 4381276 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 1876590 |
End bp | 1877402 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639324290 |
Product | short chain dehydrogenase |
Protein accession | YP_789877 |
Protein GI | 116051291 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAACC GCATGATGAT CACCGGTGCC GGCTCCGGGC TGGGGCGCGA AATCGCCCTG CGCTGGGCGC GTGACGGCTG GCGCCTGGCG CTGGCCGACG TCAACGAAGC CGGCCTGGCG GAAAGCCTGA AACTGGTGCG CGAGGCGGGT GGCGATGGCT TCACCCAGCG TTGCGACGTA CGCGACTACA GTCAACTGAC CGCGCTGGCG CAGAGCTGCG AGGAGAAGTT CGGCGGCATC GACGTCATCG TCAACAACGC CGGGGTCGCC TCCGGCGGTT TCTTCGGCGA GCTGTCCCTG GAGGACTGGG ACTGGCAGAT CGCGATCAAC CTGATGGGCG TGGTCAAGGG CTGCAAGGCC TTCCTGCCGC TGCTGGAGCG AAGCAAGGGC AAGATCGTCA ACATCGCCTC GATGGCGGCG TTGATGCAGG GCCCGGCGAT GAGCAACTAC AACGTGGCCA AGGCCGGGGT GGTGGCGCTT TCGGAAAGCC TGCTGGTAGA GCTGGCGCTG GTCGAGGTCG GCGTCCATGT GGTCTGTCCT TCGTTCTTCC AGACCAACCT GCTGGACTCT TTCCGCGGCC CGAGCCCCGA GATGAAGCAC CAGGTCGGCA AGTTGCTGGA GAGTTCGCCG ATCAGCGCTG CCGACATCGC CGACTACATC CACGCCGAAG TGGCCAAGGG CAGTTTCCTG ATCCTGCCCC ACGAGCAGGC GCGGATGGCC TGGAGGATCA AGCAGCAGAA TCCCCAGGCG ATCTATGACG AGATGACCGC GATGGCCGGC AAGATGCAGG CCAAGCGTCA GCGCCAGGCC TGA
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Protein sequence | MQNRMMITGA GSGLGREIAL RWARDGWRLA LADVNEAGLA ESLKLVREAG GDGFTQRCDV RDYSQLTALA QSCEEKFGGI DVIVNNAGVA SGGFFGELSL EDWDWQIAIN LMGVVKGCKA FLPLLERSKG KIVNIASMAA LMQGPAMSNY NVAKAGVVAL SESLLVELAL VEVGVHVVCP SFFQTNLLDS FRGPSPEMKH QVGKLLESSP ISAADIADYI HAEVAKGSFL ILPHEQARMA WRIKQQNPQA IYDEMTAMAG KMQAKRQRQA
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