| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0391 |
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| Symbol | |
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| ID | 5455081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 423479 |
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| End bp | 424318 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640875956 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001411671 |
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| Protein GI | 154250847 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.319463 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCGA TCGACGGCAA ACTGGCGGTG GTGACGGGAG CGGCGAGCGG CATCGGGCGG
GGCACGGCGC TTGCGCTTGC AAAGCGTGGT GCGCGGCTTG CGATTTCGGA TCTCGACAGG
GACGGGCTTG CGGAGACGGC GGCGCGGATC GAGGCGCTGG GCGCGAAGGT CACGACCTAT
CTCGTCGACG TCGCCGACAG GGACGCGGTT TACGCTTTCG CGCAGGAGAT CGAGGCGTCG
CATGGCGGCG CGGACATCGT CATCAACAAT GCGGGCGTGG CGCAGATCGC GCGGGTGGAC
GAGCTTGCCT ATGACGATTT CGAATGGGTG ATGAATATCG ACTTCTGGGG CATGGTCTAC
GGCACCAAAG CTTTCCTTCC GCAACTGCAG GCGAAGGGCG GCGGACACAT CGTCAATGTG
TCGAGCATTT TCGGATTGAT CTCGGTGCCG ACGCAAGCCG CCTACAACTC CGCGAAGTTT
GCCATTCGCG GTTTCACCGA AGCACTGCGG CACGAGATGA AAGGCACGGA AATAAAGGTT
TCCTGTGTGC ATCCGGGTGG TATCAAAACC AATATCGTCC GTAATGCCCG TTTTCTGCAG
AGTACGCAGG CGACGGTGCG CGAGGAGGCG GCGTCGGGCT TCGACAGGAT CGCAAGGACG
ACGCCGGAAC GCGCGGGCGA GATCATCGTG AACGGAATCG CGCGCAATCG CCCCCGCATC
CTGATCGGCG TGGATGCGAA AATTGTCGAT TGGCTGCAAC GGCTTATGCC GGTTTCCTAT
GGCCGCATCA TGTTCCGCGG CGAGGGCAGC CCGCTTGCCG GAGGCGCGGA CGCGAGATAG
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| Protein sequence | MTAIDGKLAV VTGAASGIGR GTALALAKRG ARLAISDLDR DGLAETAARI EALGAKVTTY
LVDVADRDAV YAFAQEIEAS HGGADIVINN AGVAQIARVD ELAYDDFEWV MNIDFWGMVY
GTKAFLPQLQ AKGGGHIVNV SSIFGLISVP TQAAYNSAKF AIRGFTEALR HEMKGTEIKV
SCVHPGGIKT NIVRNARFLQ STQATVREEA ASGFDRIART TPERAGEIIV NGIARNRPRI
LIGVDAKIVD WLQRLMPVSY GRIMFRGEGS PLAGGADAR
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