| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3982 |
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| Symbol | |
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| ID | 4040840 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 548491 |
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| End bp | 549303 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637979406 |
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| Product | putative short-chain dehydrogenase/reductase |
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| Protein accession | YP_586119 |
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| Protein GI | 94312910 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0102992 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGTTC GCAACAAGAC CGTAATCGTG ACCGGTGGTG GCACCGGTAT TGGACGCGCC
CTGGTGCTGG CGTTTGCCCG GGCCGGCGCA CGCGGCATCG CCGTGGCGGA TATTGACGAG
GCCGGGGCGT CGCAGGTGGC TGCCGAGGCC GTGGCGGCCG CGCCAGGCTG CCAGATCTTC
TCGCAACGCG TGGACGTCGC GAATGCCGAA GCCGTGCAGA AGCTGGTCGA TACTGCCACG
CAGCGTTTCG GTCAGGTGGA CGTGTTCTGC TCGAACGCCG GCATCATCCT GCGCAAGGGC
CTGGATGCCA CCGCGGACGA ATGGCAGCGC ATCTGGGAAA TCAACGTCAT GGCGCATATC
CACGCGGCCA AGGCCGTGCT GCCGCAGATG CTCGAACGTG GCGATGGGTA CTTCGTGAAC
ACGGTTTCGG CTGCAGGTCT GCTCTCGCAG ATCGGATCGG CGCCTTATGC CGTGACCAAG
CACGCGGCGA TCGGCTTTGC CGAATGGCTG TCGATCACCT ACGGCGACCG CGGCATCAAG
GTGAGTTGCA TCTGCCCGCA GGGCGTGCAG ACGAAGATGC TGTTCGGCGA GGGCGGCGAG
CGCAAGGGCT TCCTGCAGGC CGGTTCGGTC ACGGCCGAGC ACGTTGCCGA GAAGACGCTC
GAAGGCGTTG CCAACGAGAG CTTCCTGATC CTGCCACACC CCGAGGTGTT GGAGTACTAC
CGTCGCAAGG GGCAGGACTA TGATCGGTGG CTGCGTGGCA TGCGTCGGCT GCACGACCAA
GTCACCAAGG AGTTCGGCAA CATCGTCGTT TAA
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| Protein sequence | MEVRNKTVIV TGGGTGIGRA LVLAFARAGA RGIAVADIDE AGASQVAAEA VAAAPGCQIF
SQRVDVANAE AVQKLVDTAT QRFGQVDVFC SNAGIILRKG LDATADEWQR IWEINVMAHI
HAAKAVLPQM LERGDGYFVN TVSAAGLLSQ IGSAPYAVTK HAAIGFAEWL SITYGDRGIK
VSCICPQGVQ TKMLFGEGGE RKGFLQAGSV TAEHVAEKTL EGVANESFLI LPHPEVLEYY
RRKGQDYDRW LRGMRRLHDQ VTKEFGNIVV
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