| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3027 |
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| Symbol | |
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| ID | 3910826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 3450231 |
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| End bp | 3451010 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637884933 |
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| Product | Short-chain dehydrogenase/reductase |
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| Protein accession | YP_486640 |
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| Protein GI | 86750144 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.730472 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACC GAATTCGGCT GGACGGCAGG GTGGCGCTGG TCACCGGCGC CGCGGGAGTG
ATCGGCCGCG CGACCATCGA CCTGCTCGCA GAACGTGGTG CCCGGATCGT CGCCATCGAC
CGCGATCGGA CGGCGCTCGA TCAGGCGGTC GCCGCCCTGC CCGCCTCGGC GCAACCGCTG
GCGCTCACCG CCGACGTCAC CCAGGAAGAT CAAGTCGCGG CCTATGTGCG CGCCGCGCTC
GAGCGCTGCG GGCGGATCGA CGTGTTCTAC AACAATGCCG GTATCGAGGG TGATATCGCG
CCGATCGTGC GCACCTCGCT CGACGCCTTC CGCCGCGTGC TCGACGTCAA CGTCGTCGGC
GTGTTTCTCG GCATGAAGCA CGTGCTGCCG GCGATGCTGC AGCTGGGCTC CGGCAGCATC
ATCAACACCG CCTCGATCGC CGGATTGATC GGCTCCAACG ACATCATCGC CTACACCGCC
AGCAAACACG CCGTGATCGG CATGACGAAA ACGGCGGCGC TGGAATGCGG CGACAGCGGC
GTGCGCGTCA ATTGCGTCTG CCCCGGACTG ATCGACAGCC GGATGCTCAG CGCGATCGTC
GAAGGCCGCA ATCCCGGCCC GACGCCGGTG CCCAACGACA AGATCGTCGA CCGGATTCCG
GCGCGGCGGC TCGGTCATGC CGCGGAGGTC GCCTCGGTGG TGGCGTTTCT CGCCTCCGAC
GAGGCGAGCT ACGTGTCGGG CGCGGCCTAC ACCGTCGACG GCGGCCGCAC CGCGAGCTGA
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| Protein sequence | MTDRIRLDGR VALVTGAAGV IGRATIDLLA ERGARIVAID RDRTALDQAV AALPASAQPL
ALTADVTQED QVAAYVRAAL ERCGRIDVFY NNAGIEGDIA PIVRTSLDAF RRVLDVNVVG
VFLGMKHVLP AMLQLGSGSI INTASIAGLI GSNDIIAYTA SKHAVIGMTK TAALECGDSG
VRVNCVCPGL IDSRMLSAIV EGRNPGPTPV PNDKIVDRIP ARRLGHAAEV ASVVAFLASD
EASYVSGAAY TVDGGRTAS
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