| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_2914 |
|---|
| Symbol | |
|---|
| ID | 8884113 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 3065798 |
|---|
| End bp | 3066574 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_003511682 |
|---|
| Protein GI | 291300404 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0109588 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.00528047 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACGGTGC GGCAGGGCGC GGTCGTCGTG GTCACCGGCG GCGGCAACGG CATCGGCGCG
GCCTTGGCGC GCCGCTTCGC CGCCGACAAG GCCACCGTCG TCGTCAACGA CCTAGACCCG
GACGCGGCAG CGGCGGTGGC CGCCGACATC GACGGGGTGG CCATCGCCGC CGACGCGGTA
CATCCCGAGC ACCTGATAAC CGAAGTCCGG CAACGCTTCG GCGAGATCGA CCTGTACTGC
GCCAACGCCG GAGTACCGGC GGGCGGCTCC GAACAGGCCC CCGACGAGGA CTGGGACCGC
GCCTGGCAGG TCAACGTGAT GGCTCACGTC CGGGCCAGCC GCGTCCTCAT CGGCCCCTGG
CTGGAACGCG GCCGGGGCCA CCTGCTGACC ACCGTGTCGG CGGCGGGCCT GTTGACGATG
CTGGGCGCCG CCCCCTACTC GGCCACCAAA CACGCGGCCC TGGCCTTCGC CGAATGGATG
ACCATCACCT ACGGCGACAA AGGAATCCGA ACCCAGGCCA TCTGCCCGCT CGGGGTGCGC
ACCAACATGA TCAACGACAT CGGCCGCTAC GGCGAAGTAC TCCTGGAACC GGCGGCGATC
GCCCCCGAAG CCGTGGCCGA CGCGGTGGCC GACGCTCTGG ACGACGGCCC GTTCCTCATC
CTCCCGCACC CCGAGGTCGC CAAGATGTAC GCCCGCCGCG CCACCGACCC CGACCGCTGG
CAAACCGCGT TGCGGCAGAT CCAGTCCACC ATCGAGGCCG ACCCCGCCGC GACCTGA
|
|---|
| Protein sequence | MTVRQGAVVV VTGGGNGIGA ALARRFAADK ATVVVNDLDP DAAAAVAADI DGVAIAADAV
HPEHLITEVR QRFGEIDLYC ANAGVPAGGS EQAPDEDWDR AWQVNVMAHV RASRVLIGPW
LERGRGHLLT TVSAAGLLTM LGAAPYSATK HAALAFAEWM TITYGDKGIR TQAICPLGVR
TNMINDIGRY GEVLLEPAAI APEAVADAVA DALDDGPFLI LPHPEVAKMY ARRATDPDRW
QTALRQIQST IEADPAAT
|
|---|
| |