| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5999 |
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| Symbol | |
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| ID | 8362181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7601943 |
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| End bp | 7602734 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644968135 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003125614 |
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| Protein GI | 256424961 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACGTT TAAAAGATAA GGCAATTGTT ATTACAGGTG CGGCTATGGG TCTTGGTTAT
GCAGCAGCAT TAGAGGCAGC TAAGAATGGA GCAAAATTAT CTCTTGTGGA TTATAACGGG
GAATCGCTGG AGAAAGCGAA AACTGTGATC CTGGAACAGT ACCCGGATAC AAAAATCATC
ACACTGGTTG CAGATGTTTC TGATGAGGCA GCGGTGAAAA GGTATGTAGA TGAGACCGTG
AATGCGTTTG GTACGATTGA CGGATTTTAT AATAATGCAG GTATTGAAGG CAGACAGGCG
CCATTGATTG AGTACGACCT GGATGTATTC AGAAAAGTGG TCGATATTAA CCTGATGGGT
GTGTATTATG GCCTCAGGTA TGTGATTCCC GTGATGCAGC AACAGGGATA TGGAAGGATC
GTGAATGTTG CTTCTGTAGG CGGTATAAGG GGCGTAATGA ATCAGACGGC TTATGTGGCA
ACCAAACACG CAGTGGCTGG TGTTACTAAA AATGCATCAC TGGAATATGG CAGATACGGG
ATACTGACGA ACGCAATTGC CCCGGGAGCT ATTCTGACAC CAATGGTAGC AGAGGCATTT
AAGCAGGTAA ATCCGGCAGA TCCGAAGAAA GCGGAGGCTG AATATGCACA GGCGAATCCT
ACTAAAAGAC TTGGTTTGCC GGAGGAAGTG GGTAAGTTGG TGGTATTCCT GCTCAGTGAG
GATTGTAGTT ATGTAAATGG TCAGACTATC GCAATTGACG GCGGACAGTC TAACAGCTAT
GGAAATGTTT AG
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| Protein sequence | MGRLKDKAIV ITGAAMGLGY AAALEAAKNG AKLSLVDYNG ESLEKAKTVI LEQYPDTKII
TLVADVSDEA AVKRYVDETV NAFGTIDGFY NNAGIEGRQA PLIEYDLDVF RKVVDINLMG
VYYGLRYVIP VMQQQGYGRI VNVASVGGIR GVMNQTAYVA TKHAVAGVTK NASLEYGRYG
ILTNAIAPGA ILTPMVAEAF KQVNPADPKK AEAEYAQANP TKRLGLPEEV GKLVVFLLSE
DCSYVNGQTI AIDGGQSNSY GNV
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