Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_0346 |
Symbol | |
ID | 4115069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 372049 |
End bp | 372819 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638035136 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_643134 |
Protein GI | 108803197 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0244456 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGGCTTG AGGACAGGGT AGCGGTGATC ACCGGGGCGG CGAGCGGGCA GGGGCGGGCC GCGGCGAAGC TGTTCGCCTC CGAAGGGGCA AAGGTCGTCG CAGCGGACAT AGACGAGGGC GGGGCGCAGA GGACGGTCGA GGAGATAAAG GAGGCCGGCG GCGAGGCGAC CGCCGTAAAG GTGGACGTGT CCCGCGAGCC CGACGTCAGG GCCATGGTAG AGAGTGCCAC AGACCGGTAC GGGCGGCTCG ACGTCCTCTT CAACAACGCG GGCGTGGGCT ACTCGGCCTC GGGGCGCATG AAGATGGCCA GCGTGGTCGA GACCCCCGAG AAAGACTGGG ACGCGATCCT CGCCATCAAC CTCAAGGGCG TGGCGCTGGG CTGCAAGCAC GCCATCCCCG TCATGGAGCG GCAGGGCTAC GGCTCGATCA TCAACAACGC CTCGATCAAC GCCCTGGTGG GGCTTCCCGG CGCGGACGCC TACACGGCGG CAAAGGGAGG CGTGGTCGCG TTCTCCCGAG TTCTGGCCGT AGAGTGGGGT CCCAGGGGGA TAAGGGTGAA CTGCATCTGC CCCGGCGGCG TCGACACGCC GATGATAGCC CCGGTGATCT CGGACGAGCG GGTCATGCAG TCCATGAGGC AGAACACCCC CCTCGGGCGG CTGGCCCGGC CGGAGGAGAT CGCCAGCGTA GCGCTGTTCC TCGCCTCGGA GGAGGCCTCC TACCTCAACG GCGCAATCAT CCCCGTCGAC GGCGGCTGGA CCGCACACTG A
|
Protein sequence | MRLEDRVAVI TGAASGQGRA AAKLFASEGA KVVAADIDEG GAQRTVEEIK EAGGEATAVK VDVSREPDVR AMVESATDRY GRLDVLFNNA GVGYSASGRM KMASVVETPE KDWDAILAIN LKGVALGCKH AIPVMERQGY GSIINNASIN ALVGLPGADA YTAAKGGVVA FSRVLAVEWG PRGIRVNCIC PGGVDTPMIA PVISDERVMQ SMRQNTPLGR LARPEEIASV ALFLASEEAS YLNGAIIPVD GGWTAH
|
| |