| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3700 |
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| Symbol | |
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| ID | 4024216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4129174 |
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| End bp | 4129977 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637963904 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_570822 |
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| Protein GI | 91978163 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.209869 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGTTG CGGGCAAGGT CGTCGTCGTC ACCGGCGGCG GCAATGGAAT CGGTCAGGCG
ATGTGCGAGG CGTTTGCCAA AGCGGGCGCC GCCAAGGTCG TGGTCGCCGA TCTCGATCAG
GCCCGCGCCG AGGCGGTCGC CGCGGCGATC ACCGGCGCGG CGTTCAAATG CGACGTCGCG
GTCGAATCCG ACATCAAGCA TGTGATCGAC GAGACCGAAC GGCACTTCGG CCCGATCGCG
CTGTTCTGTT CCAATGCCGG GATCGGCGGC GGCTTCGATC CGCTGTCGGA GAATGCCGGC
GGCGCGTCCG ACGAGCCGTT CATGAAGAGC TGGATGATCC ATGTGATGGC GCATGTCTAC
GCCGCGCGGC ATCTGGTGCC GCTCTACAGA GCACGAGGCG GCGGCTATTT CCTCAACACG
ATTTCGGCGG CGGGGCTGCT GTCGCAGGTC GGCAGCCCGG CCTATTCGGC GACCAAGCAC
GGCGCAGTCG GCTTCGCCGA AAATCTCGCG ATCTCGCACA AGGCGCACAA CATCAAGGTC
TCGATCCTCT GCCCGCAGGG TGTCGACACC AACATGCTGC GCGGGCTGCC GAAAGGGCCG
CAATCCGCCG ACGGCAATCT GTCGCCGGAG CAGGTCGCGG AGGACGCGCT GAAAGGCATC
GAGCAGGAAA CCTTCCTGAT CCTGCCGCAC CCCCAGGTGC TCGACTACAT GCGCAAGAAG
ACCGAGAACT ACGACCGCTG GATCGGCGGC ATGGCGAAGA TCCAGGCCCA TCTGCGCGAG
ACGTTCGGAG CGAAGGCGAA CTGA
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| Protein sequence | MQVAGKVVVV TGGGNGIGQA MCEAFAKAGA AKVVVADLDQ ARAEAVAAAI TGAAFKCDVA
VESDIKHVID ETERHFGPIA LFCSNAGIGG GFDPLSENAG GASDEPFMKS WMIHVMAHVY
AARHLVPLYR ARGGGYFLNT ISAAGLLSQV GSPAYSATKH GAVGFAENLA ISHKAHNIKV
SILCPQGVDT NMLRGLPKGP QSADGNLSPE QVAEDALKGI EQETFLILPH PQVLDYMRKK
TENYDRWIGG MAKIQAHLRE TFGAKAN
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