| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_16720 |
|---|
| Symbol | |
|---|
| ID | 8387004 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 1726229 |
|---|
| End bp | 1727020 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644975748 |
|---|
| Product | short-chain dehydrogenase of unknown substrate specificity |
|---|
| Protein accession | YP_003133532 |
|---|
| Protein GI | 257055700 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACAACCG AGACGATCGA TCTTGCGGGA GCCGGGGTCG TCGTCACCGG CGGAGGTAAG
GGCATCGGAG CGGCGTTGGC CGCACGGTTC GCCGCCGAGG GTGCCCGAGT GGTCGTCGCC
GACCTCGACG GCGACGCCGC ATCGGCCGTG GCGGAGCGGG TGGGGGGCAC CGCCGTGGCG
GGGGACGCGG CGTCGGCCGA GGGGGTACGC GCGTTGGTGG GCGCGGCTCG CGACGCACTC
GGCGAGATCG ATCTGTTCTG CGCCAACGCG GGTATCGCCG TGCCCGGTGG TCCCGACGCT
TCAGAGGAGG TGTGGTCGCG GGTCTGGGAG GTCAACGTCA TGGCCCACGT CCGCGCCGCC
CGGGAACTCC TACCGCGTTG GTTGGAACGG GGTCGTGGTC ATTTCCTGGC CACCGTCTCC
GCCGCGGGGT TGCTGACGAA CCTCGGCTCG GCACCGTACT CGGTGACCAA ACACGCGGCC
CTCGGATTCG CCGAATGGCT TTCGGTGACC TATCGACACC GCGGTATCCG GGTGCAGGCC
ATCTGCCCCC AGGGAGTGCG CACCGACATG CTCGCGAACT CGGGGTCGGT GGGCGCGGCA
CTGCTGGGAC CCGGCGCCAT CGAACCCGAG CAGGTCGCCG ACGTCACCAT GGAGGGGTTG
CGGGACGGGC GCTTCCTCAT CCTGCCGCAT CCCGAGGTCG CCGAGTACTA CGCGAACCGG
GCCACCCGGA CCGAACGCTG GTTGGCCGGC ATGAACAAAC TGCAACGCAA ACTCGAGGGC
ACGGCGGAGT AG
|
|---|
| Protein sequence | MTTETIDLAG AGVVVTGGGK GIGAALAARF AAEGARVVVA DLDGDAASAV AERVGGTAVA
GDAASAEGVR ALVGAARDAL GEIDLFCANA GIAVPGGPDA SEEVWSRVWE VNVMAHVRAA
RELLPRWLER GRGHFLATVS AAGLLTNLGS APYSVTKHAA LGFAEWLSVT YRHRGIRVQA
ICPQGVRTDM LANSGSVGAA LLGPGAIEPE QVADVTMEGL RDGRFLILPH PEVAEYYANR
ATRTERWLAG MNKLQRKLEG TAE
|
|---|
| |