| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0974 |
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| Symbol | |
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| ID | 5732875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 1117176 |
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| End bp | 1117940 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641278106 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001543750 |
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| Protein GI | 159897503 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTTTAC ACGACAACGT TGTCATCATT ACCGGAGCCG CCTCAGGGAT GGGCCTTGCG
ATGGCTACCC GCTTTGCTGC CGAAGGAGCT AAATTAGTAC TTGGCGATTG GAATGCTCAG
CGGCTCGAAG CAGCCGTCGC CACGATTCAA GCCAGCGGGG CCGCCGTGGT GGGTGCACAA
GGGAACATTG CCGATCAAGC GACTGCCGAG GCCTTAGTTG ATTTAGCCAT CAGCAGCTAC
GGCCAACTCG ATGTGCTCTG CAACAACGCC GGGGTTATGG ATTCGATGCA AGGAGTCGCC
GAAGTTTCCG ATGATATGTG GCGACGAGTC TTGGGCATCA ATCTCGAAGG CCCGATGTTT
ACTAGTCGGC GGGCACTCAA ATATATGTTG GAGCGTGGCA GCGGCGTGAT TGTTAATGTT
GCTTCGACGG CAGGAATTCA TGGTGGTTCA GCTGGCGCAG CCTACACCGC CTCGAAACAT
GCCTTGGTTG GCCTAACCCG TAACACCGCA TGGATTTACG CCAAACGCAA CATTCGCTGT
AACGCAATTT GCCCAGGCGG CACGATCACC AACATCGTCG AATCGATGGA TCGCAACGCG
ATTGCTCCAG CCGATGCTGC TCGCGTTGGC GAGTTTACTG CGCTGGCTCC GGCCTACCTC
GAACCCTCGG ATATTGCCAA TTTGGCCTTA TTCTTGGCTT CGGATGAGTC GCGGCATATC
AATGGGGCAA TTATTCCAGC CGATGCTGGT TGGGCCGCCG TTTAG
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| Protein sequence | MRLHDNVVII TGAASGMGLA MATRFAAEGA KLVLGDWNAQ RLEAAVATIQ ASGAAVVGAQ
GNIADQATAE ALVDLAISSY GQLDVLCNNA GVMDSMQGVA EVSDDMWRRV LGINLEGPMF
TSRRALKYML ERGSGVIVNV ASTAGIHGGS AGAAYTASKH ALVGLTRNTA WIYAKRNIRC
NAICPGGTIT NIVESMDRNA IAPADAARVG EFTALAPAYL EPSDIANLAL FLASDESRHI
NGAIIPADAG WAAV
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