Gene Mjls_1294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_1294 
Symbol 
ID4877030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp1386216 
End bp1387007 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content74% 
IMG OID640138602 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001069587 
Protein GI126433896 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.625854 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.126067 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATCG ACAACAGCGT CGTGGCGATC ACCGGCGCCG GTTCCGGGAT CGGGCGTGCC 
CTCGCGGAGT CGTTCGCCGC CGCCGGCGCC CGCCTGGTGC TGGGCGACGT CGACGATGCC
GGTCTGGCCG TCACCGCCGA ACGTCTGGCG GCCGACGGGG CCGACGTCAG CACCGTGCAC
GCCGATGCCA GTTCGGCCGA CGACATCGCG GCCATGGCCG CTGCGCAACC GGTCGACGTC
TTCGTCGCCA ACGCCGGCGT GATGGGCGCC CCCGGACTGG GCACCGAGGC GGACTGGGAC
CGCATCCTCG ACGTGAACCT GCGCGCGCAC GTACGTGCGG CCACGCTGCT GGTGCCGCAG
TGGCAGGCCC GCGGTCGCGG ACACTTCGTC AGCGTCGCGT CGGCCGCCGG ACTGCTCACC
CAGATCGGCG CCGCGGGCTA CGCGGTGAGC AAGCACGCAG CGGTGGGCTT CGCCGAATGG
CTCGCGGTCA CCTACGGCGA CGACGGCATC GGCGTGACGT GCGTCTGCCC CATGGGGGTC
GACACCCCGC TGCTGAACGC GATCCGCGAT GCGGCCGACG CCGAGGTCCG CCTGGGTGCG
GAGTCCGTCG TGCAGGCCGG CGCCGTCATC AGTCCGCGCG AGGTCGCCGA GCAGACGGTC
GCCGCGGTGC GCGACGGCCG GTTCCTCGTG CTGCCCCACC CCGCCGTGCG CGACATGCTC
GCGGGCAAGG TCGCCGACCA CGACCGGTGG ATCGCCGGGA TGCGCCGCTA CCAGCGGTCG
CTGCGGCAGT GA
 
Protein sequence
MDIDNSVVAI TGAGSGIGRA LAESFAAAGA RLVLGDVDDA GLAVTAERLA ADGADVSTVH 
ADASSADDIA AMAAAQPVDV FVANAGVMGA PGLGTEADWD RILDVNLRAH VRAATLLVPQ
WQARGRGHFV SVASAAGLLT QIGAAGYAVS KHAAVGFAEW LAVTYGDDGI GVTCVCPMGV
DTPLLNAIRD AADAEVRLGA ESVVQAGAVI SPREVAEQTV AAVRDGRFLV LPHPAVRDML
AGKVADHDRW IAGMRRYQRS LRQ