| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4069 |
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| Symbol | |
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| ID | 4312964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 988946 |
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| End bp | 989884 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638151910 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_775956 |
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| Protein GI | 115358818 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.596903 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAGATT TCGCCAACAA GGTCGCCGCG ATCACGGGCG CCGGCTCGGG CATGGGCCGC
GCGCTCGCGG TCCAGCTCGC GCGGGCCGGC TGCCACGTGT CGCTCGCCGA CAAGAACGGC
GTCGGCCTCG CCGAGACCGA GCGGATCGTC CGCGCGATCG CGCCGAACGT GCGCGTGTCG
ACGCGCATGC TGGATGTCGG CGATCGCGAC GCGATGTTCG CGTGGGCCGA CGACACCGCG
AAAGAGCACG GCAAGGTCAA CCTGATCTTC AACAATGCGG GCGTCGCGCT GTCGAGCACG
ATCGAAGGGA TGGAATACAG CGATCTCGAG TGGATCGTGA ACATCAACTT CTGGGGCGTC
GTGCACGGCA CGAAGGCGTT CCTGCCGCAC CTGAAGGCAT CGGGCGACGG TCACGTGATC
AACACGTCGA GCATCTTCGG GATCTTCGCG CAGCCGGGCA TGAGCGGCTA CAACGCGACC
AAGTTCGCGG TGCGCGGCTT CACCGAATCG CTGCGCCAGG AACTCGACAT GATGAAGTGC
GGCGTGTCGG CGACCTGCGT GCATCCGGGC GGCGTCCGCA CGAACATCGC GCAGTCGAGC
TGCGTCGCGA AGAACATGAT CGGCTTCCTC ATTCAGAGCG AGCAGCAAGG CAAGGACAAC
TTCGAGAAAT TCTTCATCAC GAGCGCCGAC GATGCCGCGC GCACGATCCT CGCCGGCGTG
CGCAAGAACA AGCGCCGCGT GCTGATCGGC CGCGATGCGA AGGGCGCCGA CTGGATGGCG
CGCATCATGC CGGCCGCCTA CCAGGCGATC GTGGTGCTCG TGTCGCGCCG CGAGGCCGCG
AAGGCCCGCC GCGAGGCCGC CCGCTACGGC GCGCCGGCGG CCGCTCCGCT TCACGCCCCC
TACAACAACG CAGGCAATCA GGCAGGAGAA CAATCATGA
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| Protein sequence | MRDFANKVAA ITGAGSGMGR ALAVQLARAG CHVSLADKNG VGLAETERIV RAIAPNVRVS
TRMLDVGDRD AMFAWADDTA KEHGKVNLIF NNAGVALSST IEGMEYSDLE WIVNINFWGV
VHGTKAFLPH LKASGDGHVI NTSSIFGIFA QPGMSGYNAT KFAVRGFTES LRQELDMMKC
GVSATCVHPG GVRTNIAQSS CVAKNMIGFL IQSEQQGKDN FEKFFITSAD DAARTILAGV
RKNKRRVLIG RDAKGADWMA RIMPAAYQAI VVLVSRREAA KARREAARYG APAAAPLHAP
YNNAGNQAGE QS
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