| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1627 |
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| Symbol | |
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| ID | 1183264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1783328 |
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| End bp | 1784143 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637392999 |
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| Product | oxidoreductase, short chain dehydrogenase/reductase family |
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| Protein accession | NP_791452 |
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| Protein GI | 28868833 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0861444 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAACC GCATCATGAT TACTGGCGCC GGCTCTGGTC TGGGCCGTGA AATGGCACTG
CGCTGGGCGC GCGAAGGATG GCGGCTGGCA TTGTCGGATA TCAATGATGC CGGTTTGCAG
GAAACCCTGG CCCTGGTACG CGAGGCGGGC GGTGACGGTT TTGTTCAGCG CTGCGACGTT
CGTGACTACA GCCAGCTCAC CGCATTCGCT CAGACCTGCG AAGAGCGCTT CGGCGGCATG
GACATCATCG TCAACAATGC AGGCGTGGCG TCGGGTGGTT TCTTCAACGA GCTGTCGCTG
GAAGACTGGG ACTGGCAGAT TGCAATCAAC CTGATGGGCG TGGTCAAAGG CTGCAAAGCG
TTCTTGCCGA TGTTGCAGGC GAGCAAGGGC AAGATCATCA ACATCGCCTC AATGGCCGCG
CTGATGCAGG CCCCGGCCAT GAGCAATTAC AACGTTGCCA AGGCGGGCGT GGTGGCGCTT
TCCGAGAGCC TGCTGGTTGA ACTGCGCGAT CAGGATGTCG GCGTGCACGT GGTCTGCCCG
TCGTTCTTTC AGACCAACCT GCTTGATTCC TTTCGCGGCC CCACCCCGGC GATGAAAGCG
CAGATCGGCA GGCTGCTGGA AAAATCCCCG ATCACCGCTA CAGACATTGC CGATTACATC
TTCACGCAGG TAGCCGAAGG CGAATTCATG ATCCTGCCCC ACGAAGAAGG CCGCCTGGCC
TGGGACATGA AGCGCCAACA GCCACAGGCG ATGTACGACG AGATGACCGT GATGTGCGCC
AAAATGCGCG CAAAGGCCCA GAAAGGGCAC GCCTGA
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| Protein sequence | MQNRIMITGA GSGLGREMAL RWAREGWRLA LSDINDAGLQ ETLALVREAG GDGFVQRCDV
RDYSQLTAFA QTCEERFGGM DIIVNNAGVA SGGFFNELSL EDWDWQIAIN LMGVVKGCKA
FLPMLQASKG KIINIASMAA LMQAPAMSNY NVAKAGVVAL SESLLVELRD QDVGVHVVCP
SFFQTNLLDS FRGPTPAMKA QIGRLLEKSP ITATDIADYI FTQVAEGEFM ILPHEEGRLA
WDMKRQQPQA MYDEMTVMCA KMRAKAQKGH A
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