| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0235 |
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| Symbol | |
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| ID | 6184141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 213767 |
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| End bp | 214501 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641670947 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001797146 |
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| Protein GI | 171463033 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 72 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGATA GATTAAAAGA CAAAGTAGCC ATCATCACCG GCGCCGCTAA AGGCATAGGC
TTTGCTACAG CCCAGCGTTT TGCGCAAGAG GGTGCTAAGG TCATCATTAC CGATATCAAT
CAAGATGCCG TCAACGGTGC GGTTGCACAA ATTCCTAATG CTGAGGGTTG CGCAATGAAT
GTCACTGATC GCGCGAGCAT TCAGGCGGTG GTTGATCAGG TGATACAAAA ACACGGACGT
ATTGATATCT TGATTAATAA CGCTGGCATT ACACAAGATG CCCGTTTAAT TAAGAGGACT
GAGGCCCAGT TTGATACCGT GATTAATGTC AATTTAAAGG GAGTCTTTAA TTGCACTCAA
TTGATCGTGC CGCATATGCT CGAGGCTGGT TCTGGTGCAG TAGTCAATGC ATCTAGCGTT
GTAGGTCTGT ACGGTAATTT TGGTCAAACC AATTACTCGG CCACCAAATT TGGTGTCATT
GGCTTTATTA AAACCTGGGC GCGTGAATTG GGTCCCAAAG GTATTCGTGT CAATGCGGTA
TGCCCCGGTT TTATCGCCAC AGAAATGGTG AAAGCTCTGC CAGAAAATAT TTTGCAAGAT
ATTGAAAAGC GTAGTTGGCT TGGCCGTCTT GGTACGCCTA ACGAAATGGC TAATGTGTAT
TTATTCTTAG CTAGCGATGA GGCGAGCTAT GTCAATGGGG TGACATTAGA GGCCAGCGGC
GGGATCTCCC TCTAA
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| Protein sequence | MGDRLKDKVA IITGAAKGIG FATAQRFAQE GAKVIITDIN QDAVNGAVAQ IPNAEGCAMN
VTDRASIQAV VDQVIQKHGR IDILINNAGI TQDARLIKRT EAQFDTVINV NLKGVFNCTQ
LIVPHMLEAG SGAVVNASSV VGLYGNFGQT NYSATKFGVI GFIKTWAREL GPKGIRVNAV
CPGFIATEMV KALPENILQD IEKRSWLGRL GTPNEMANVY LFLASDEASY VNGVTLEASG
GISL
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