| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_1652 |
|---|
| Symbol | |
|---|
| ID | 4286836 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | - |
|---|
| Start bp | 1810748 |
|---|
| End bp | 1811539 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638141139 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_756882 |
|---|
| Protein GI | 114570202 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 0.406649 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTATC AGGGCAAGGT GGTCGCGATC ACCGGCGGCG CGCGGGGTAT CGGCCTCGCC
ATGGCGCAGG CTTTCCACGC GAAGGGCGCC AAGGTCGCGC TTGCGGACCT GGACGGGGCG
GAAGAGGCGG CCAAGGCCTT TGGTGGTATC GGCATGAAGG TCGATGTCAC CAAGGAGGCT
GAAATTGGCG CCTTCCTCGA CAAGGCCGAA GCTGAGCTGG GTCCGATTGC GGTCTACGTC
TCGAATGCCG GCATCTTGCG TTCGGACGAG CCGAGCTGGG ATGCCGCCGG TGCCGACGAC
AAGGCCTGGC ACGACAGTTT CGAGGTCAAT GTGATGGGCG CCGTGCGCGG GGCCCGGCAG
GTCTGGCCGC GCATGAAGGC GCAGGGCGGG GGCATCTTTG TCCTGGTGGC TTCGGCGGCC
GGCTTGCTGG CCCAGATCGG GGCGTCATCC TATACCGCCT CCAAACATGC CGCCGTGTCC
TTTGCCGAGA GCCTGGCGAT CGGGCATGGT GATGAAGGCC TGCAGGTTGT GTGCGTGTGT
CCGCAGGCGG TGCGTACCGC GATGCTGGGT GACAGCGAAG ATGGCGGCAT TGCCGGCGCC
GACGGTATCG TCGAGCCGTC CGATGTCGCC GCCGAAACGC TGGCGGCCAT TGCCGAAAAG
CGTTTCCTGG CGCTGCCGCA TGCTTCGGTC GCCGGCTATG AAAAGGCCCG AGCCAATGAA
CGCGACCGCT GGGTTGGCGG AATGCGCAAG TTTCGCCGCA TGTTGATGGG CGCTCGCGGG
CGCCCGGTCT AG
|
|---|
| Protein sequence | MDYQGKVVAI TGGARGIGLA MAQAFHAKGA KVALADLDGA EEAAKAFGGI GMKVDVTKEA
EIGAFLDKAE AELGPIAVYV SNAGILRSDE PSWDAAGADD KAWHDSFEVN VMGAVRGARQ
VWPRMKAQGG GIFVLVASAA GLLAQIGASS YTASKHAAVS FAESLAIGHG DEGLQVVCVC
PQAVRTAMLG DSEDGGIAGA DGIVEPSDVA AETLAAIAEK RFLALPHASV AGYEKARANE
RDRWVGGMRK FRRMLMGARG RPV
|
|---|
| |