Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_2248 |
Symbol | |
ID | 9138953 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 2900132 |
End bp | 2900926 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003630273 |
Protein GI | 296122495 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAGATAT CTAACCAGGT TGTACTGGTC ACGGGTGGAG GAAAAGGGAT TGGCGAGGCT CTGGCGATTA AAGCCTCCCA GCAATCCCCT CGTGTGGTGA TCGTGGCAGA TCGAGACCAG AGTTTTGCCG AATCTGTTGC GGCACGTTGT GAGTCCGTCG CTGAAGCGAT CTGCTGTGAT GTCTGCGTAC CCACCGATTT GGCAAAACTG ACGAATCACA TCACCGAGAA ATACGGTTCG ATCGATATCG TTTTTTCCAA TGCCGGCGCA ACAGCTAAGG GTGGGCTTGA AACCTCTCTG GAAGACTGGA ACAAGCTCTG GCAGATCAAT GTGCTCTCGC ATGTCGAGCT GGCACGATTG ACGATTCTTC ACATGGCTCA AAAGGGGAGT GGTGCATTTA TTGTGACCGC TTCAGCCGCT GGAGTTTTGA CGGAAATTGG TTCATTGGCA TACTCCGTCA CCAAGCATGG CAGTCTTGCC ATTGCCGAAT GGCTTTCAGT CCATTACCGA CGACAAGGGG TGCAGCTTCA TTGCCTTTGT CCTGCGGGAG TTGCGACGGA TTTTCTGGAC CTGGATGACC CGATTCATCA GTTCCTGCAC ATGAGTGCCT TGACCGCTGA GCAGGTCGCT GAGGCCGCTT TTGAAGCGAT CGAGCTCAAT CGCTTTCTCG TATTACCGCA CAAGGAAGTT CTGGAATTCT TCCAGTTCAA AACGCAGGAC TACGACCGCT GGCTGCATAA CTTTTCGCGG GTGCAGGAGC GGCTAGCCAA ACTGGCTTCT AAAAATCAGA GTTAG
|
Protein sequence | MQISNQVVLV TGGGKGIGEA LAIKASQQSP RVVIVADRDQ SFAESVAARC ESVAEAICCD VCVPTDLAKL TNHITEKYGS IDIVFSNAGA TAKGGLETSL EDWNKLWQIN VLSHVELARL TILHMAQKGS GAFIVTASAA GVLTEIGSLA YSVTKHGSLA IAEWLSVHYR RQGVQLHCLC PAGVATDFLD LDDPIHQFLH MSALTAEQVA EAAFEAIELN RFLVLPHKEV LEFFQFKTQD YDRWLHNFSR VQERLAKLAS KNQS
|
| |