Gene Plim_2248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2248 
Symbol 
ID9138953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2900132 
End bp2900926 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content52% 
IMG OID 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003630273 
Protein GI296122495 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGATAT CTAACCAGGT TGTACTGGTC ACGGGTGGAG GAAAAGGGAT TGGCGAGGCT 
CTGGCGATTA AAGCCTCCCA GCAATCCCCT CGTGTGGTGA TCGTGGCAGA TCGAGACCAG
AGTTTTGCCG AATCTGTTGC GGCACGTTGT GAGTCCGTCG CTGAAGCGAT CTGCTGTGAT
GTCTGCGTAC CCACCGATTT GGCAAAACTG ACGAATCACA TCACCGAGAA ATACGGTTCG
ATCGATATCG TTTTTTCCAA TGCCGGCGCA ACAGCTAAGG GTGGGCTTGA AACCTCTCTG
GAAGACTGGA ACAAGCTCTG GCAGATCAAT GTGCTCTCGC ATGTCGAGCT GGCACGATTG
ACGATTCTTC ACATGGCTCA AAAGGGGAGT GGTGCATTTA TTGTGACCGC TTCAGCCGCT
GGAGTTTTGA CGGAAATTGG TTCATTGGCA TACTCCGTCA CCAAGCATGG CAGTCTTGCC
ATTGCCGAAT GGCTTTCAGT CCATTACCGA CGACAAGGGG TGCAGCTTCA TTGCCTTTGT
CCTGCGGGAG TTGCGACGGA TTTTCTGGAC CTGGATGACC CGATTCATCA GTTCCTGCAC
ATGAGTGCCT TGACCGCTGA GCAGGTCGCT GAGGCCGCTT TTGAAGCGAT CGAGCTCAAT
CGCTTTCTCG TATTACCGCA CAAGGAAGTT CTGGAATTCT TCCAGTTCAA AACGCAGGAC
TACGACCGCT GGCTGCATAA CTTTTCGCGG GTGCAGGAGC GGCTAGCCAA ACTGGCTTCT
AAAAATCAGA GTTAG
 
Protein sequence
MQISNQVVLV TGGGKGIGEA LAIKASQQSP RVVIVADRDQ SFAESVAARC ESVAEAICCD 
VCVPTDLAKL TNHITEKYGS IDIVFSNAGA TAKGGLETSL EDWNKLWQIN VLSHVELARL
TILHMAQKGS GAFIVTASAA GVLTEIGSLA YSVTKHGSLA IAEWLSVHYR RQGVQLHCLC
PAGVATDFLD LDDPIHQFLH MSALTAEQVA EAAFEAIELN RFLVLPHKEV LEFFQFKTQD
YDRWLHNFSR VQERLAKLAS KNQS