| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1774 |
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| Symbol | |
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| ID | 6409431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1909100 |
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| End bp | 1909900 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642711662 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001990777 |
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| Protein GI | 192290172 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGATCG CGGGCAAAGC CGTCGTCGTC ACCGGCGGCG GCAACGGAAT CGGGCAGGCG
CTGTGCGAAG CCTTTCACAA GGCCGGCGCC GCCAAGGTGG TGGTCGCTGA CCTCGATCAG
GCCCGCGCCG AAGCGGTCGC CGCGTCGATC GGCGGCGCGG CTTTCAAGTG CGACGTGGCC
AATGAGGCCG ACATCAAGCA CGTGATTGAG GAGGCCGAGC GCCAGTTCGG GCCGATCGAT
CTGTTCTGCT CCAACGCCGG GATCGGCGGC GGCTTCGATC CGATGGCGGA GAACGCCGGC
GGCGCCTCCG ACGAGCCGTT CATGAAGAGC TGGATGATCC ACGTGATGGC GCATGTCTAC
GCCGCGCGGC ATCTGGTGCC GCGCTACCGG GCGCGCGGCG GCGGTTACTT CCTCAACACC
ATCTCGGCGG CGGGGCTGCT GTCGCAGGTC GGCAGCCCGG CCTATTCGGC CACCAAGCAC
GGCGCCGTCG GCTTCGCCGA AAGCCTCGCC ATCGCTCACA AGGCGCACAA CATCCGTGTT
TCGATCCTGT GCCCGCAGGG CGTCGATACC AACATGCTGC GCTCGATCCC GAAGGGGCCT
CAGTCCGCTG ACGGCGATCT CACCGCCGAG CAGGTGGCGA AGGATGCGCT GCAGGGCATC
GAACAGGAAA CCTTCCTGAT CCTGCCGCAC CCGCAAGTGA TCGACTACAT GCGCAAGAAG
ACCGAGAACT ACGATCGCTG GATCGGCGGC ATGGCGAAGA TCCAGGCCAA GCTCCGCGAG
ACGTTCGGCG GCAAGGCGTA G
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| Protein sequence | MQIAGKAVVV TGGGNGIGQA LCEAFHKAGA AKVVVADLDQ ARAEAVAASI GGAAFKCDVA
NEADIKHVIE EAERQFGPID LFCSNAGIGG GFDPMAENAG GASDEPFMKS WMIHVMAHVY
AARHLVPRYR ARGGGYFLNT ISAAGLLSQV GSPAYSATKH GAVGFAESLA IAHKAHNIRV
SILCPQGVDT NMLRSIPKGP QSADGDLTAE QVAKDALQGI EQETFLILPH PQVIDYMRKK
TENYDRWIGG MAKIQAKLRE TFGGKA
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