Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1946 |
Symbol | |
ID | 1043114 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 2201352 |
End bp | 2202140 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637145351 |
Product | short chain dehydrogenase/reductase family oxidoreductase |
Protein accession | NP_744098 |
Protein GI | 26988673 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.000000538802 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGACAGTCA ATTATGATTT TTCCGGAAAA GTCGTGCTGG TTACCGGCGC TGGCTCTGGT ATTGGCCGTG CCACTGCGCT TGCCTTCGCG CAGTCGGGCG CATCCGTTGC GGTCGCAGAC ATCTCGACTG ACCACGGTTT GAAAACCGTA GAGTTGGTCA AAGCCGAAGG AGGCGAGGCG ACCTTCTTCC ATGTCGATGT AGGCTCTGAA CCCAGCGTCC AGTCGATGCT GGCTGGTGTC GTGGCGCATT ACGGCGGCCT GGACATTGCG CACAACAACG CCGGCATTGA GGCCAATATC GTGCCGCTGG CCGAGCTGGA CTCCGACAAC TGGCGTCGTG TCATCGATGT GAACCTTTCC TCGGTGTTCT ATTGCCTGAA AGGTGAAATC CCTCTGATGC TGAAAAGGGG CGGCGGCGCC ATTGTGAATA CCGCATCGGC CTCCGGGCTG ATTGGCGGCT ATCGCCTTTC CGGGTATACC GCCACGAAGC ACGGCGTAGT GGGGCTGACT AAGGCTGCTG CTATCGATTA TGCAAACCAG AATATCCGGA TTAATGCCGT GTGCCCTGGT CCAGTTGACT CCCCATTCCT GGCTGACATG CCGCAACCCA TGCGCGATCG ACTTCTCTTT GGCACTCCAA TTGGACGATT GGCCACCGCA GAGGAGATCG CGCGTTCGGT TCTGTGGCTG TGTTCTGACG ATGCAAAATA CGTGGTGGGC CATTCGATGT CAGTCGACGG TGGCGTGGCA GTGACTGCGG TTGGTACTCG AATGGATGAT CTCTTTTAA
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Protein sequence | MTVNYDFSGK VVLVTGAGSG IGRATALAFA QSGASVAVAD ISTDHGLKTV ELVKAEGGEA TFFHVDVGSE PSVQSMLAGV VAHYGGLDIA HNNAGIEANI VPLAELDSDN WRRVIDVNLS SVFYCLKGEI PLMLKRGGGA IVNTASASGL IGGYRLSGYT ATKHGVVGLT KAAAIDYANQ NIRINAVCPG PVDSPFLADM PQPMRDRLLF GTPIGRLATA EEIARSVLWL CSDDAKYVVG HSMSVDGGVA VTAVGTRMDD LF
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