Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4194 |
Symbol | |
ID | 3717595 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4734973 |
End bp | 4735734 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | short chain dehydrogenase |
Protein accession | YP_349922 |
Protein GI | 77460415 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.896625 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATGA CGTTTTCCGG TCAGGTAGCC GTCGTCACCG GCGCGGCCAA CGGCATCGGC CGCGCGACGG CCCAGGCGTT CGCCGCCGAA GGTCTGAAAG TGGTGGTGGC CGATCTGGAT GCGGCCGGGG GCGAGGGCAC CGTGGCGCTG ATTCGTACAG CCGGCGGCGA AGCGACCTTC GTGCGCTGCA ACGTGACCGT CGAAAGCGAA GTGAAGAATC TGATGGACGA GGTGATCAAT ACCTACGGCC GTCTCGACTA TGCCTTCAAC AATGCCGGGA TCGAAATCGA GAAGGGCAAA CTGGCCGAAG GCTCGATGGA TGAGTTCGAC GCGATCATGG GCGTCAACGT CAAGGGCGTG TGGCTGTGCA TGAAGTACCA GCTGCCGTTG CTGCTGGCTC AGGGCGGCGG GGCGATCGTC AACACTGCAT CGGTGGCTGG ATTGGGCGCT GCGCCGAAGA TGAGCATCTA TGCCGCCTCC AAGCACGCGG TAATCGGTCT GACCAAGTCC GCCGCCATCG AATACGCCAA GAAGAAAATC CGCGTCAACG CCGTATGCCC GGCGGTGATC GATACCGACA TGTTCCGTCG CGCCTATGAA GCGGATCCGA AGAAAGGCGA ATTTGCCAAC GCGATGCACC CGGTCGGCCG TATCGGCAAG GTCGAGGAAA TTGCCAGCGC CGTGCTGTAC CTGTGCAGTG ATGGTGCGGC GTTTACCACC GGCCATTCGC TGGCGGTGGA TGGTGGCGTG ACTGCCTTCT AA
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Protein sequence | MSMTFSGQVA VVTGAANGIG RATAQAFAAE GLKVVVADLD AAGGEGTVAL IRTAGGEATF VRCNVTVESE VKNLMDEVIN TYGRLDYAFN NAGIEIEKGK LAEGSMDEFD AIMGVNVKGV WLCMKYQLPL LLAQGGGAIV NTASVAGLGA APKMSIYAAS KHAVIGLTKS AAIEYAKKKI RVNAVCPAVI DTDMFRRAYE ADPKKGEFAN AMHPVGRIGK VEEIASAVLY LCSDGAAFTT GHSLAVDGGV TAF
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