Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_2457 |
Symbol | |
ID | 4115299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 2472684 |
End bp | 2473559 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638037237 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_645196 |
Protein GI | 108805259 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0300911 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGAGA TCCCGGGGAA GGTTGCGCTC GTTACCGGCG GGGCGGGCGG TTTGGGGAGG CTCATGGCCG TGAAGCTGGC CCGCCGGGGG GCGCGGGTGG TGATCTACGA CCTGGACGAG GGGGCTGTGG AGAGGGCGGT GGGCGAGATC GGCGCGCGGG GCGGGGGGGA GGCGCACGGG TACGTGTGCG ACGTCTCCGA CCGGGAGGCC GTCTACGAGA CGGCGGAGAG GGTTCGGGGC GAGGTGGGGG ACGTGGACAT CCTCGTAAAC AACGCCGGGG TGGTCACCGG CAGGCGCCTG CTCGAGGCCC CGGACGAGCA GATAGAGCGG GTCTTCCGGG TCAACGCGCT CGCGCTCTAC TGGGTCACCA AGTCCTTTCT GCCGCGCATG ATCGAGCGGG ACTCGGGGCA CATCGTGACC ATAGCCTCGG CGGCCGGGCT CGTGGGGGTC AGCAAGCAGA CCGACTACTC GGCGAGCAAG CACGCCGCCA TAGGCTTCAT GGAGTCTCTG CGGGTGGAGC TCAAGCGCTA CGGGCACCGG GGGGTACGGA CCACCATCGT CAACCCCTAC TACATAGACA CCGGGATGTT CCGGGGGGTC AGGACCCGCT TCCCGCGGGT TCTCCCCATA CTCGACCCGG ACAGGGTCGC GGGGAAGGTG GTGCGCATGA TCGAACGCAA CCGGCAGGAG ATAAAGATGC CCCTCATCGT CACCACCGTC CCGGCGCTGC ACGTGCTGCC GGCGGACGTT CTGGACTGGA TCATGGACTT CTTCGGGGTC AACCACTCGA TGGACGAGTT CGTGGGCCGC CGGGGGAGCG AGGAGGAGGA GGGGGCCGCC CCCCGCAGAG GAGCCCTCTC CTCCCGGAGG GGGTGA
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Protein sequence | MTEIPGKVAL VTGGAGGLGR LMAVKLARRG ARVVIYDLDE GAVERAVGEI GARGGGEAHG YVCDVSDREA VYETAERVRG EVGDVDILVN NAGVVTGRRL LEAPDEQIER VFRVNALALY WVTKSFLPRM IERDSGHIVT IASAAGLVGV SKQTDYSASK HAAIGFMESL RVELKRYGHR GVRTTIVNPY YIDTGMFRGV RTRFPRVLPI LDPDRVAGKV VRMIERNRQE IKMPLIVTTV PALHVLPADV LDWIMDFFGV NHSMDEFVGR RGSEEEEGAA PRRGALSSRR G
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