More than 300 homologs were found in PanDaTox collection
for query gene Mboo_0332 on replicon NC_009712
Organism: Candidatus Methanoregula boonei 6A8



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009712  Mboo_0332  response regulator receiver protein  100 
 
 
147 aa  308  2e-83  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal 
 
 
-
 
NC_009712  Mboo_1023  response regulator receiver protein  58.73 
 
 
128 aa  161  3e-39  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.456114  normal  0.530348 
 
 
-
 
NC_009712  Mboo_1697  response regulator receiver protein  46.77 
 
 
164 aa  104  3e-22  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.359972 
 
 
-
 
NC_009712  Mboo_2110  multi-sensor signal transduction histidine kinase  36.96 
 
 
789 aa  84.7  4e-16  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.377648  normal 
 
 
-
 
NC_007796  Mhun_1792  multi-sensor signal transduction histidine kinase  42.31 
 
 
984 aa  84.7  4e-16  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_007796  Mhun_1923  response regulator receiver domain-containing protein  36.29 
 
 
149 aa  82.4  0.000000000000002  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_011832  Mpal_2477  multi-sensor signal transduction histidine kinase  37.12 
 
 
1439 aa  80.5  0.000000000000006  Methanosphaerula palustris E1-9c  Archaea  normal  0.131363  normal  0.44536 
 
 
-
 
NC_011832  Mpal_1525  multi-sensor signal transduction histidine kinase  35.57 
 
 
813 aa  80.1  0.00000000000001  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_011832  Mpal_2215  putative PAS/PAC sensor protein  36.57 
 
 
637 aa  78.6  0.00000000000003  Methanosphaerula palustris E1-9c  Archaea  normal  normal  0.245996 
 
 
-
 
NC_011832  Mpal_1709  putative PAS/PAC sensor protein  34.85 
 
 
669 aa  77.8  0.00000000000005  Methanosphaerula palustris E1-9c  Archaea  normal  0.0628445  normal 
 
 
-
 
NC_011832  Mpal_2700  multi-sensor signal transduction histidine kinase  37.04 
 
 
593 aa  77.4  0.00000000000005  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_009712  Mboo_0338  multi-sensor signal transduction histidine kinase  37.8 
 
 
653 aa  77.4  0.00000000000006  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.84298 
 
 
-
 
NC_007796  Mhun_1943  multi-sensor signal transduction histidine kinase  38.39 
 
 
596 aa  77.4  0.00000000000006  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_009712  Mboo_0292  multi-sensor signal transduction histidine kinase  36.8 
 
 
530 aa  77.4  0.00000000000006  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal 
 
 
-
 
NC_009712  Mboo_1121  multi-sensor signal transduction histidine kinase  34.81 
 
 
1513 aa  76.3  0.0000000000001  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal 
 
 
-
 
NC_007796  Mhun_1353  multi-sensor signal transduction histidine kinase  33.33 
 
 
1078 aa  75.9  0.0000000000002  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_007796  Mhun_1643  response regulator receiver domain-containing protein  34.96 
 
 
200 aa  75.5  0.0000000000002  Methanospirillum hungatei JF-1  Archaea  normal  0.831648  normal 
 
 
-
 
NC_009712  Mboo_0309  multi-sensor signal transduction histidine kinase  33.33 
 
 
657 aa  75.1  0.0000000000003  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal 
 
 
-
 
NC_007796  Mhun_1309  multi-sensor signal transduction histidine kinase  41.35 
 
 
472 aa  75.5  0.0000000000003  Methanospirillum hungatei JF-1  Archaea  normal  0.974547  normal  0.0144544 
 
 
-
 
NC_011832  Mpal_2756  putative PAS/PAC sensor protein  34.65 
 
 
402 aa  74.7  0.0000000000003  Methanosphaerula palustris E1-9c  Archaea  normal  normal  0.482766 
 
 
-
 
NC_009712  Mboo_1482  multi-sensor signal transduction histidine kinase  32.52 
 
 
656 aa  74.3  0.0000000000005  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.548294  normal 
 
 
-
 
NC_007796  Mhun_1419  multi-sensor signal transduction histidine kinase  35.34 
 
 
769 aa  74.3  0.0000000000005  Methanospirillum hungatei JF-1  Archaea  normal  0.0849788  normal  0.753623 
 
 
-
 
NC_011832  Mpal_2462  multi-sensor signal transduction histidine kinase  34.96 
 
 
1032 aa  73.9  0.0000000000007  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_011832  Mpal_1755  multi-sensor signal transduction histidine kinase  34.92 
 
 
781 aa  73.6  0.0000000000008  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_009712  Mboo_1463  multi-sensor signal transduction histidine kinase  31.76 
 
 
768 aa  73.6  0.0000000000008  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.103172  normal 
 
 
-
 
NC_009712  Mboo_0161  multi-sensor signal transduction histidine kinase  33.33 
 
 
1039 aa  73.6  0.0000000000008  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal 
 
 
-
 
NC_007796  Mhun_0549  multi-sensor signal transduction histidine kinase  36.59 
 
 
765 aa  73.6  0.0000000000009  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_007796  Mhun_1607  response regulator receiver domain-containing protein  42.31 
 
 
186 aa  73.6  0.0000000000009  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.790082 
 
 
-
 
NC_009712  Mboo_0339  multi-sensor signal transduction histidine kinase  34.07 
 
 
771 aa  72.8  0.000000000001  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.84298 
 
 
-
 
NC_011832  Mpal_1919  multi-sensor signal transduction histidine kinase  31.29 
 
 
862 aa  72.8  0.000000000001  Methanosphaerula palustris E1-9c  Archaea  normal  0.592004  normal  0.385421 
 
 
-
 
NC_011832  Mpal_2266  putative PAS/PAC sensor protein  33.33 
 
 
906 aa  72.4  0.000000000002  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_011832  Mpal_0079  signal transduction histidine kinase  37.5 
 
 
909 aa  72.4  0.000000000002  Methanosphaerula palustris E1-9c  Archaea  normal  normal  0.130581 
 
 
-
 
NC_007796  Mhun_2037  response regulator receiver domain-containing protein  34.65 
 
 
161 aa  72.4  0.000000000002  Methanospirillum hungatei JF-1  Archaea  normal  0.119709  normal  0.0947193 
 
 
-
 
NC_011832  Mpal_1293  putative PAS/PAC sensor protein  33.33 
 
 
1265 aa  72.8  0.000000000002  Methanosphaerula palustris E1-9c  Archaea  normal  normal  0.307468 
 
 
-
 
NC_011832  Mpal_0141  putative PAS/PAC sensor protein  36.43 
 
 
837 aa  71.6  0.000000000003  Methanosphaerula palustris E1-9c  Archaea  normal  decreased coverage  0.00355903 
 
 
-
 
NC_011832  Mpal_0170  multi-sensor signal transduction histidine kinase  35.07 
 
 
603 aa  70.9  0.000000000005  Methanosphaerula palustris E1-9c  Archaea  normal  normal  0.651305 
 
 
-
 
NC_009712  Mboo_1245  putative PAS/PAC sensor protein  33.61 
 
 
400 aa  70.9  0.000000000006  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal 
 
 
-
 
NC_007796  Mhun_2967  putative PAS/PAC sensor protein  33.6 
 
 
376 aa  70.5  0.000000000007  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_011832  Mpal_0622  putative PAS/PAC sensor protein  34.4 
 
 
440 aa  70.5  0.000000000008  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_011832  Mpal_1470  response regulator receiver protein  40.38 
 
 
268 aa  70.1  0.000000000009  Methanosphaerula palustris E1-9c  Archaea  decreased coverage  0.00118197  normal 
 
 
-
 
NC_009712  Mboo_2366  multi-sensor signal transduction histidine kinase  29.69 
 
 
901 aa  69.7  0.00000000001  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.180969  normal 
 
 
-
 
NC_007796  Mhun_2026  putative PAS/PAC sensor protein  37.21 
 
 
511 aa  70.1  0.00000000001  Methanospirillum hungatei JF-1  Archaea  normal  0.0685118  normal  0.11395 
 
 
-
 
NC_009712  Mboo_1502  multi-sensor signal transduction histidine kinase  35.96 
 
 
783 aa  69.3  0.00000000001  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.0445794 
 
 
-
 
NC_009712  Mboo_0402  multi-sensor signal transduction histidine kinase  33.6 
 
 
766 aa  68.9  0.00000000002  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.371468  normal 
 
 
-
 
NC_009712  Mboo_1360  signal transduction histidine kinase  32.84 
 
 
524 aa  68.9  0.00000000002  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.0984724 
 
 
-
 
NC_011832  Mpal_2464  putative PAS/PAC sensor protein  33.61 
 
 
812 aa  68.6  0.00000000002  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_011004  Rpal_2710  signal transduction histidine kinase  32.28 
 
 
363 aa  68.9  0.00000000002  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.304131  n/a   
 
 
-
 
NC_007796  Mhun_1847  multi-sensor signal transduction histidine kinase  33.33 
 
 
763 aa  68.9  0.00000000002  Methanospirillum hungatei JF-1  Archaea  normal  0.926751  normal  0.806541 
 
 
-
 
NC_011832  Mpal_0047  signal transduction histidine kinase  33.59 
 
 
980 aa  68.6  0.00000000003  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_011832  Mpal_1514  multi-sensor signal transduction histidine kinase  29.05 
 
 
1253 aa  68.2  0.00000000003  Methanosphaerula palustris E1-9c  Archaea  normal  0.841858  normal  0.0475592 
 
 
-
 
NC_007778  RPB_3023  signal transduction histidine kinase  32.28 
 
 
361 aa  68.6  0.00000000003  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.183877  normal 
 
 
-
 
NC_007796  Mhun_1267  putative PAS/PAC sensor protein  37.5 
 
 
849 aa  68.2  0.00000000003  Methanospirillum hungatei JF-1  Archaea  normal  0.0446298  normal  0.4297 
 
 
-
 
NC_007796  Mhun_2385  multi-sensor signal transduction histidine kinase  34.33 
 
 
720 aa  68.6  0.00000000003  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.788418 
 
 
-
 
NC_011901  Tgr7_3262  nitrogen metabolism transcriptional regulator, NtrC, Fis Family  31.47 
 
 
471 aa  68.6  0.00000000003  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009712  Mboo_0640  multi-sensor signal transduction histidine kinase  33.58 
 
 
886 aa  68.6  0.00000000003  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.257142  normal 
 
 
-
 
NC_007796  Mhun_0545  multi-sensor signal transduction histidine kinase  34.43 
 
 
896 aa  68.2  0.00000000004  Methanospirillum hungatei JF-1  Archaea  normal  0.91043  normal 
 
 
-
 
NC_007796  Mhun_1026  putative PAS/PAC sensor protein  32.35 
 
 
559 aa  68.2  0.00000000004  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_007958  RPD_2428  signal transduction histidine kinase  32.28 
 
 
360 aa  68.2  0.00000000004  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.391955  decreased coverage  0.00462713 
 
 
-
 
NC_007796  Mhun_0642  putative PAS/PAC sensor protein  31.11 
 
 
401 aa  67.4  0.00000000007  Methanospirillum hungatei JF-1  Archaea  normal  0.201186  normal  0.0191068 
 
 
-
 
NC_007796  Mhun_1208  multi-sensor signal transduction histidine kinase  33.33 
 
 
619 aa  67  0.00000000007  Methanospirillum hungatei JF-1  Archaea  normal  0.0242207  normal  0.0474084 
 
 
-
 
NC_011832  Mpal_1070  multi-sensor signal transduction histidine kinase  32.24 
 
 
1426 aa  67  0.00000000008  Methanosphaerula palustris E1-9c  Archaea  normal  0.632131  normal  0.158919 
 
 
-
 
NC_009712  Mboo_0459  multi-sensor signal transduction histidine kinase  33.33 
 
 
1301 aa  67  0.00000000008  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.012558 
 
 
-
 
NC_007796  Mhun_1649  response regulator receiver sensor signal transduction histidine kinase  35.92 
 
 
550 aa  66.6  0.0000000001  Methanospirillum hungatei JF-1  Archaea  normal  0.181327  normal  0.670777 
 
 
-
 
NC_009051  Memar_0872  multi-sensor signal transduction histidine kinase  30.83 
 
 
500 aa  66.6  0.0000000001  Methanoculleus marisnigri JR1  Archaea  normal  0.3427  n/a   
 
 
-
 
NC_011146  Gbem_0080  response regulator receiver modulated metal dependent phosphohydrolase  31.58 
 
 
357 aa  66.2  0.0000000002  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007796  Mhun_0264  response regulator receiver domain-containing protein  36.54 
 
 
178 aa  65.9  0.0000000002  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.107419 
 
 
-
 
NC_011832  Mpal_1167  multi-sensor signal transduction histidine kinase  33.85 
 
 
544 aa  65.5  0.0000000002  Methanosphaerula palustris E1-9c  Archaea  normal  0.230477  normal 
 
 
-
 
NC_007796  Mhun_2968  putative PAS/PAC sensor protein  30.94 
 
 
479 aa  65.9  0.0000000002  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_013158  Huta_0330  multi-sensor signal transduction histidine kinase  37.14 
 
 
758 aa  65.9  0.0000000002  Halorhabdus utahensis DSM 12940  Archaea  normal  n/a   
 
 
-
 
NC_009712  Mboo_0795  putative PAS/PAC sensor protein  30.08 
 
 
458 aa  65.5  0.0000000002  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.0670898  normal 
 
 
-
 
NC_012918  GM21_0063  response regulator receiver modulated metal dependent phosphohydrolase  31.58 
 
 
357 aa  64.7  0.0000000004  Geobacter sp. M21  Bacteria  n/a    hitchhiker  2.56416e-22 
 
 
-
 
NC_009712  Mboo_0331  multi-sensor signal transduction histidine kinase  33.59 
 
 
608 aa  64.7  0.0000000004  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal 
 
 
-
 
NC_007796  Mhun_0454  signal transduction histidine kinase  27.59 
 
 
657 aa  64.7  0.0000000004  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.263033 
 
 
-
 
NC_010465  YPK_4191  nitrogen regulation protein NR(I)  36.08 
 
 
470 aa  64.7  0.0000000004  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.500264  n/a   
 
 
-
 
NC_009436  Ent638_4098  nitrogen regulation protein NR(I)  28.99 
 
 
470 aa  64.3  0.0000000005  Enterobacter sp. 638  Bacteria  normal  normal  0.797915 
 
 
-
 
NC_007796  Mhun_1962  multi-sensor signal transduction histidine kinase  31.78 
 
 
603 aa  64.3  0.0000000005  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_007963  Csal_2407  two component, sigma54 specific, Fis family transcriptional regulator  31.72 
 
 
461 aa  64.3  0.0000000005  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_1117  two component, sigma54 specific, Fis family transcriptional regulator  29.63 
 
 
466 aa  63.5  0.0000000008  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_013743  Htur_3337  multi-sensor signal transduction histidine kinase  36.94 
 
 
685 aa  62.8  0.000000001  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_007355  Mbar_A2388  response regulator receiver  32.54 
 
 
127 aa  63.2  0.000000001  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.0389923  normal  0.541574 
 
 
-
 
NC_010159  YpAngola_A0027  nitrogen regulation protein NR(I)  30.77 
 
 
470 aa  62.8  0.000000001  Yersinia pestis Angola  Bacteria  normal  0.307133  normal 
 
 
-
 
NC_009051  Memar_1339  multi-sensor signal transduction histidine kinase  33.33 
 
 
931 aa  63.2  0.000000001  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_009832  Spro_4883  nitrogen regulation protein NR(I)  29.5 
 
 
470 aa  63.2  0.000000001  Serratia proteamaculans 568  Bacteria  normal  0.177074  hitchhiker  0.0000322182 
 
 
-
 
NC_011832  Mpal_0015  response regulator receiver sensor signal transduction histidine kinase  42.17 
 
 
347 aa  63.2  0.000000001  Methanosphaerula palustris E1-9c  Archaea  normal  0.84393  normal  0.0442191 
 
 
-
 
NC_007796  Mhun_1440  putative PAS/PAC sensor protein  30.71 
 
 
477 aa  62.8  0.000000001  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_007796  Mhun_1481  multi-sensor signal transduction histidine kinase  36.89 
 
 
1425 aa  63.2  0.000000001  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_011071  Smal_2118  two component transcriptional regulator, winged helix family  36.76 
 
 
238 aa  63.2  0.000000001  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.717558  normal 
 
 
-
 
NC_013922  Nmag_2042  multi-sensor signal transduction histidine kinase  31.62 
 
 
477 aa  62.8  0.000000001  Natrialba magadii ATCC 43099  Archaea  normal  0.562637  n/a   
 
 
-
 
NC_008609  Ppro_0502  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  33.65 
 
 
705 aa  63.2  0.000000001  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_4118  nitrogen metabolism transcriptional regulator, NtrC, Fis Family  26.81 
 
 
469 aa  62  0.000000002  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_3366  histidine kinase  42.11 
 
 
580 aa  62  0.000000002  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_007796  Mhun_0840  response regulator receiver domain-containing protein  31.11 
 
 
196 aa  62.8  0.000000002  Methanospirillum hungatei JF-1  Archaea  normal  0.351248  normal  0.247104 
 
 
-
 
NC_007796  Mhun_1723  signal transduction histidine kinase  30.89 
 
 
764 aa  62.4  0.000000002  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_011353  ECH74115_5314  nitrogen regulation protein NR(I)  26.81 
 
 
472 aa  62  0.000000002  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.111299  normal  0.738695 
 
 
-
 
NC_007912  Sde_0499  response regulator receiver domain-containing protein  35.05 
 
 
473 aa  62.4  0.000000002  Saccharophagus degradans 2-40  Bacteria  normal  0.021061  normal 
 
 
-
 
NC_008609  Ppro_3046  response regulator receiver modulated metal dependent phosphohydrolase  36.08 
 
 
365 aa  62.4  0.000000002  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0429754  n/a   
 
 
-
 
NC_009712  Mboo_1949  putative PAS/PAC sensor protein  30.07 
 
 
461 aa  62.4  0.000000002  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.724461 
 
 
-
 
NC_011757  Mchl_4788  histidine kinase  42.11 
 
 
685 aa  62.4  0.000000002  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_4159  nitrogen regulation protein NR(I)  28.06 
 
 
470 aa  62.4  0.000000002  Dickeya zeae Ech1591  Bacteria  normal  0.086406  n/a   
 
 
-
 
NC_009708  YpsIP31758_0025  nitrogen regulation protein NR(I)  30.77 
 
 
470 aa  62.8  0.000000002  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.151443  n/a   
 
 
-
 
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