Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_0640 |
Symbol | |
ID | 5411462 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | + |
Start bp | 604379 |
End bp | 607039 |
Gene Length | 2661 bp |
Protein Length | 886 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640867859 |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_001403801 |
Protein GI | 154150183 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.257142 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTTCCC TGCTCTATGT CGATGACGAG CCGGCACTTC TGGATTTGTG CCGGTTGTTT CTGGAGCAGG AAGGAGACAT TTCAGTCAGT ACCGCCGGAT CGGTAGAGGA AGCACTCGCC CGCATTGCCG CCGGTACTTT TGATGCCATC ATCTCCGATT ACCAGATGCC GGAGATTGAT GGTATCACGT TTCTTCGTAC CATTCGTCGG CAGTACCCGG ATATGCCGTT TATCCTTTTT ACCGGCCGGG GCCGGGAAGA AGTTGTCATC GAGGCAATTA ACAGCGGGGT GGACTCGTAT GTCCAGAAAG GCGGCGATTC ACGGGCACAG TTCAAGGAGC TTTCCCACCT CATCCGGCAG ATCGTGCGGA GGCGTAAGGC TGAATCCGGA CTGCGACAGA TGAAGTTTTC CGTTGACCAC GCTTCGGAAG GCATCATCTG GCTGAGGGGG AGTGGCGAGA TTGCCTATTT CAATGAGGCC ATCTGCGCCA TGCTTGGGTA TACGCCACGA GAATTTTCCG GGCTCTCGGT TGTAGACATC AGGCCGGGAT TGTCCCGGCA ATCCTTATCT TCTGCATGGG ATCGTATTCT CTCCCGGAAG TGTGCTTCTA TCGAAGAGAT GCTCCTTAAA AAGGATGGCT CCACCCTGCC GGTGGAACTT GTGCTCAGCT ATAATGAGCA GGGTCCGGAT CCGCTGATTT TTGTATTTGT ACGGGATATC AGCGAACGCC GGCGTTCTGA GGAGAGCCTC AAGAAAGCCG TTTGCCAGTT GATCCAGATG GAAGATGACC TGCACCGGCA ATTCGAAGAT CTCAAAAAGA GCGATCATGC AATGCGGGAG ATTGGCCAGA GGTACCAGAT GCTCTCTGCC GTGTCCAAAG ACTGGATCTG GGAGATCGAT ACAGATTGTC GCATAACCTA TTCGGGTCCT CAGGTACAGG CTCTCCTTGG ATTTGATCCT GCAGCTCTTG CCGGAAAGTG TTTTTCTGAT CTTCTGGTAC CAGCGTGTGC CCTGTGGGCC TCATCAGAGC TGTCCGGTCT TATGGCAAAA AAAGAGGTGT TCCACTCGCT CATCGTACGT GCGTTGCACC GTGAAGGTCG GGAGGTCCTG CTTGCCCTCA CCGGGATACC CCTGCATTCT GCGGAGGGAA CGTTTTGTGG GTTTTACGGT ATCGCGCGGG ACGTCTCGGA GGAAAAAACC CCGGATATCC TTCTGCCGTC CAGAACCCTG CTGGAACAAG CCGGCGATGC TATCTTTGTA ACCGATGTAC AGACGGGTGT AATCATTGAT GCAAACCGGA ATGCGCTCAA CTTGGTGAAT CGGACGCTCC CGGAAGTCTG TGCACTGCAG GAGTCCGCAC TGTATTCTTC CCCAAGGAGC GGGCAAACGG ACGAGCCCCT GCGGCTCCGC GACAATGACG AGCAGGGCAC AAGCGAAGAA GTGCTCGTGG ACAAGGAGGG TAACCCGATC CCGGTTATTG TCAGTACCCG GGTACTACAG GTAGGCGACC GCCGGATCCG TATCGGGATT TATCATGATA TATCGGACCT GCGGTCAATA GAATCAGCTC TTCGCGAGAA AGCCGGCGAG CTTGACCGGT TCTTTGCTTC GGGTCCCGAC ATGTTCTGCA TTCTCAATAC CGATGGCCGG ATTGTCCGAC TTAACCCGGC GGGTGAAGCC CTTCTTGGCT GTACTACCGG TCCGGGAGCA GAGCACTCCC TGCCGGAGCT CCTGCATCCT GATGATCGCG CTGACCTGCA CTATCTCCTT ATGCATATGG GCTCCGGGGG TAAGGCAAGC ACCTTTGTCA ACCGGGTGGT TCAGCCGGAT GGCTCGTCCC GCTGGCTTGA ATGGCGGGCA TTCCTGTCTG AAAAAAACCA GATTTATGCC ATCGCCCGGG ACTTCACCGG GCAGAAACGT GCTGAGCAGG CACTTGCCCT TGCCAACCGG AAACTCAGCC TGCTTACCGA TCTTACCCGC CACGATATCC GGAACAAACT GGCTGTGCTC ACCGGGTACC TCGACCTTTT CCGGAGCTGC CCGGCAGAAC CGTACTTCTC CCTGTATACA GAAAAGATCA ACGAGACGGT TGCTGCCATC ACCGCCCAGC TGGAATTCAT CAGGATCTAC CAGAAACTCG GATCCGCAGA ACCGGCATGG TTCAACGTGA ATCAGGTATT TTCCGGAGCC TGCCGGCAGC GGGAAATACC TGCTGTTATC GTTTCTTCAT CTCCGGATAG CTGGGAGATC TTTGCCGACC CGCTTATCGA CCGGGTCTTT TCGACCCTTG TGGACAATGC GTTCCGCTAT GGTGCAACCC TTACAAAAAT CCAGCGCAGT GCACATGAAT CCCCTGAGGG ACTGGTTGTC GTTATCGAGG ATAACGGGAT AGGGATTGCC CAGGAAAAGA AAGAACAGAT ATTCGAAAAA GAGGCCGGGA AAGCCTGCGG CCAGACCCAC AGCCTGTTCC TTGCCCGCGA GATCCTTTCG ATCACGGGGA TTACCCTGCG TGAGACCGGC AGGGCGGGTA AGGGTGCACG TTTTGAGATG CAGGTGCCAA AAGGAATGTA CCGGCTGCGC GAACCGGAGC CGGATCAAAA AGATATGCCG GTTTTTGCCC CAGACTTTAT CACTCCCCCG CGACATAACC ACACATTATG A
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Protein sequence | MISLLYVDDE PALLDLCRLF LEQEGDISVS TAGSVEEALA RIAAGTFDAI ISDYQMPEID GITFLRTIRR QYPDMPFILF TGRGREEVVI EAINSGVDSY VQKGGDSRAQ FKELSHLIRQ IVRRRKAESG LRQMKFSVDH ASEGIIWLRG SGEIAYFNEA ICAMLGYTPR EFSGLSVVDI RPGLSRQSLS SAWDRILSRK CASIEEMLLK KDGSTLPVEL VLSYNEQGPD PLIFVFVRDI SERRRSEESL KKAVCQLIQM EDDLHRQFED LKKSDHAMRE IGQRYQMLSA VSKDWIWEID TDCRITYSGP QVQALLGFDP AALAGKCFSD LLVPACALWA SSELSGLMAK KEVFHSLIVR ALHREGREVL LALTGIPLHS AEGTFCGFYG IARDVSEEKT PDILLPSRTL LEQAGDAIFV TDVQTGVIID ANRNALNLVN RTLPEVCALQ ESALYSSPRS GQTDEPLRLR DNDEQGTSEE VLVDKEGNPI PVIVSTRVLQ VGDRRIRIGI YHDISDLRSI ESALREKAGE LDRFFASGPD MFCILNTDGR IVRLNPAGEA LLGCTTGPGA EHSLPELLHP DDRADLHYLL MHMGSGGKAS TFVNRVVQPD GSSRWLEWRA FLSEKNQIYA IARDFTGQKR AEQALALANR KLSLLTDLTR HDIRNKLAVL TGYLDLFRSC PAEPYFSLYT EKINETVAAI TAQLEFIRIY QKLGSAEPAW FNVNQVFSGA CRQREIPAVI VSSSPDSWEI FADPLIDRVF STLVDNAFRY GATLTKIQRS AHESPEGLVV VIEDNGIGIA QEKKEQIFEK EAGKACGQTH SLFLAREILS ITGITLRETG RAGKGARFEM QVPKGMYRLR EPEPDQKDMP VFAPDFITPP RHNHTL
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