| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1339 |
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| Symbol | |
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| ID | 4846246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 1322755 |
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| End bp | 1325550 |
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| Gene Length | 2796 bp |
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| Protein Length | 931 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640116030 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_001047251 |
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| Protein GI | 126179286 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATCGAA TTCTCGTAGT CGATGATGAA CCGGGGCTTC TCGAGCAGAA CCGGATCTAC
CTGGAGACGT CCGGCGACAT GCGGGTCGAG ACGACGTCGT CGTCGCTGCA GGCTCTCGAT
ATGCTCTCGA AAGCCCCTTA CGACGCCATC ATCGCCGACT ACGAGATGCC GGAGATGGAC
GGCATCACCC TCTTAAAGGA GGTCCGCAAC AGGGGCCTCT CGATACCGTT CATCATCTTT
TCCGGCCGCG GCCGCGAGGA GGTGATCATC GAGGCGCTCA ACAACGGGGC GGATTTCTAC
CTCCAGAAAG GCGGCAACCC CTCCGCCCAG TTTGCCGAAC TCCAGAACAT GATCCTCCAG
GCAGTCCGGA GGAAGCAGGC CGAAGAGGAG GTACAGCGGG CCGGAGACCT GTACCGGAGC
GTCTTCGAGC ATACCGGCTC CGCCACCATC ATCATCGAGG GCGACATGAC GATCTCCCTC
GCAAACAACG AATTCGAACA CCTTACCGGC TATTCCCGTG AGGAGATAGA ATCAAAGGTT
CCCTGGACGG TGTTCGTCGC CGCAGAAGAC GTTGAACGGC TCAGAAACTA TCACCGGGAA
CGGCGGACAG ACCCCGGTTC GGCGCCGAGA ACCTACGAGT TCCGGCTGGT CGACCGGCAC
GGCAGCCAGA AAGACCTGCA CATGACGATA GGGATCATCC CCGGGACGGA TCGCTCCGTT
GCATCGATGA TCGATGTCAC CGACCGGAAA CGGTTCGAGG AAGAGCTGAG CGCGGCGCAC
GAGGAGATGA TCGCGGCGTT CGAGGAGGCG AAAGCGAGCC AGGAGTCGCT CGAGGCGCAG
TGCCGCGAAA TGGAGGATTA CCAGGCAAAC CTCCGGGGCA TCATAGATTT TCTTCCCGAC
CCGACGTTCG TGCTCGACCG CACGGGGAAG GTCATCATCT GGAACCGGGC AATCGAAGAG
TTGACCGGGG TCAAGAAAAA CCGGATCATC GGATCGGGGC CGGAAGCCGT CTGCAAGACG
ATGCCCGGAC TGCAGTCCCC ACTGGTAGCG GAAAGCGTCC TCTCTCGGGG GGGCGTCGAG
AGCGTCACCC AGGAGGTTCG TATCACTTCG CCCCGCACGG GGGAGGTGGC CTGCCTCTGG
GCGAAAGCAT CGCCGCTTTA CGACGCGCAG GGGCGGCTCT CCGGAGCAAT CGAGTCGTTG
CGGGACATCA CCGATTCGAA ACGGATGGAA ACGCAGATCC AGCACCGGAT TGACCTCGAA
CAGGTGGTGA GTTCGATCTC CACGAAGTTC ATCGGCCTCG ACCCGGCGGA CCTCGAAGAC
GCCCTCGAAG AGATGCTCCA GGCGCTCGGG TCGTTCCTCG ACGTCGACCG GAGTTACATC
TTCCGCTTCT CCGCCGACCT CACCCGCGTG GAGGACACCC ATGAGTGGTG CGCGGAGGGG
ATCGAGGCGC AGATCGATGT GCTGCAGGAT CTTCCCGCCG ATGTGATCTC CTGGGGACTG
GAGCAGATCA GGGCGCAAAA CACGATCTGC ATCCCCGATA TCGCCGGTCT ACCACAGGAG
GCAGCGGCGG TGCGCGACTT CTTCCAGGGG TATGGGGTCC GGTCGCTCAT CCTGGTGCCG
ATCGCGACCA TCGATGAAAA CCTCGGGACA ATCGGGTTTG AGACCACCAG GAAGATACGA
ACCTGGTCGG ACGAGGACGT CACGCTGCTT GAGATCGTCG GCAACCTCTT TGCCGACCTC
TTCTCCCGGA TTCGTGTGCA GGAACGGCTC CGCACGAGCG AGGAGCGGTT CAGGAGCCTC
GTGGAGCGGT CGCACGACTG CTACATCCGT GCAACCACGG CGCCGCAGGC GATCGAGTAC
ATCAGCCCCT CGTGCGAGAG CCTGATCGGG TACACCCGGG AGGAGATCCT GGGCAATCCG
AATTTCATCA GGCGGTTGAT CCACCCCGAA GACCGGAAGA CGTTCTTCGC TCTGCTCCAG
GAACGGGACG CGACGGCCCG CCAGCCGTAT GTCTTCCGGG TGCGCCGGAA AGACGAGCGC
TACATCTGGG TTGAGGCCTG CACGATCCCC GTCTACGGAA ACGACGGACG GGCGGTTGCA
ATCGATTACG CGATCCACGA CATCGACGCC TGGAAACAGA CCGAGGCGGC GCTCATCCAG
GCCAACAAGA AACTCACCCT GATGAACAGC ATCGTGCGGC ACGATATCCT GAACCAGGTC
ACGGTGGTGC TCGGACATAT CGCCCTCCTC CGGGAACAGC CGCTCGATCC GACCGTCGCC
GACGCCCTCG GGAAGCAGCA GGCCGCCGTC GAGATAATAC AGTCGCAGAT CGGGTTCACG
CGGGATTACC AGGATCTCGG TGTCCGGGCA CCCCGGTGGT TCCCCGTCGA GCCCCTGGTC
ACGGGCGCCT CGAAAGCCCT TCGGCCGATC GGTATCCGGA TCTCCACCGA TCTCGACGGG
CTCTCCGTCT ACGCCGACCC GCTCCTCTCC TCCGTCTTCT TCAACCTCCT GGAGAACGCC
GGCCGGCACG GGAAGACCGT GACCGAGATC CGGGTCACGG CCATGCCGGA CGGCGGCGGA
GCCCGGATTG TCTGGGAGGA CAACGGCGTC GGCGTCCCCA GAGAGCATAA GGAGAGGATA
TTCGAGCGGG GCTTCGGGAG CCACACGGGA CTCGGGCTCT TCCTGGTGAA AGAAGTTCTC
TCGATCACCG GGATCGCCAT CCGGGAGACC GGTGAGCCCG GGAAAGGAGC CCGGTTCGAG
ATTGTGGTCC CGGAGGGCAA CGTCCGGTAC GGGTGA
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| Protein sequence | MYRILVVDDE PGLLEQNRIY LETSGDMRVE TTSSSLQALD MLSKAPYDAI IADYEMPEMD
GITLLKEVRN RGLSIPFIIF SGRGREEVII EALNNGADFY LQKGGNPSAQ FAELQNMILQ
AVRRKQAEEE VQRAGDLYRS VFEHTGSATI IIEGDMTISL ANNEFEHLTG YSREEIESKV
PWTVFVAAED VERLRNYHRE RRTDPGSAPR TYEFRLVDRH GSQKDLHMTI GIIPGTDRSV
ASMIDVTDRK RFEEELSAAH EEMIAAFEEA KASQESLEAQ CREMEDYQAN LRGIIDFLPD
PTFVLDRTGK VIIWNRAIEE LTGVKKNRII GSGPEAVCKT MPGLQSPLVA ESVLSRGGVE
SVTQEVRITS PRTGEVACLW AKASPLYDAQ GRLSGAIESL RDITDSKRME TQIQHRIDLE
QVVSSISTKF IGLDPADLED ALEEMLQALG SFLDVDRSYI FRFSADLTRV EDTHEWCAEG
IEAQIDVLQD LPADVISWGL EQIRAQNTIC IPDIAGLPQE AAAVRDFFQG YGVRSLILVP
IATIDENLGT IGFETTRKIR TWSDEDVTLL EIVGNLFADL FSRIRVQERL RTSEERFRSL
VERSHDCYIR ATTAPQAIEY ISPSCESLIG YTREEILGNP NFIRRLIHPE DRKTFFALLQ
ERDATARQPY VFRVRRKDER YIWVEACTIP VYGNDGRAVA IDYAIHDIDA WKQTEAALIQ
ANKKLTLMNS IVRHDILNQV TVVLGHIALL REQPLDPTVA DALGKQQAAV EIIQSQIGFT
RDYQDLGVRA PRWFPVEPLV TGASKALRPI GIRISTDLDG LSVYADPLLS SVFFNLLENA
GRHGKTVTEI RVTAMPDGGG ARIVWEDNGV GVPREHKERI FERGFGSHTG LGLFLVKEVL
SITGIAIRET GEPGKGARFE IVVPEGNVRY G
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