| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2266 |
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| Symbol | |
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| ID | 7272564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 2418718 |
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| End bp | 2421438 |
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| Gene Length | 2721 bp |
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| Protein Length | 906 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643570875 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_002467278 |
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| Protein GI | 219852846 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGGGTA AAACGTTGAT CACGGTGCTC CTCGTCGACG ACGAGCAGGA CCTGCTGGAT
ATCGGAAAGA GGTCGCTTGA AAAGACCGGA GACTACAGTG TTCAGAGCGC GACCTCGGCA
GAGGAAGCCC TGGAGCAGAT TGGGATCGAT CCCCCAGATG TGGTGGTCGC CGATTACATG
ATGCAGGGGG CTGACGGGAT CGAACTCCTG CACGAGGTTC GGAGAGCATA CCCCGGGCTG
CCCTTCATCA TCTTCACCGG CAGGGGAACA GAGGAGATCG TCGCAGAGGC CTATGAAGCC
GGGGCCGACT TCTATATCCA GAAGAAAGAC ATGGCCAGGG TGCAGTTTGC AGAACTGGCA
GAGAAGATCA CTAGGGCCCT GCAGCAACGG CGCGGGGAGG AGCGAATGAC CCGATTGGGT
CGGCTCAATA CCGTACTCCA ATCGACCAAC CACGCCCTGA TCAGGATCCA CGATCAGGTA
CAGCTCCTCT CTGCATCCTG TAGAATCGCA GTCGAGGATG GAGGGTTTAT CCAGGCCTGG
GCAGGGATCA CCGATCCGGT AACCGGGATG GTGGTTCCGG TGGCCTCGGC CGGCCATGTC
GCAGGCTACC TGGACAGGAT AGCCATCTCC GTGGATGATA TCCCCGCCGG TCGGGGGCCG
ACCGGAACAG CGATACGCGA GAGGCGGCCG GTGCTGATCA ATGACATCGC ATCCGATCTC
AGAATGGAAC CATGGCGGGA AGAGGCACTT GCCCGAGGAT ACCAATCCTC GGCGTCCTTT
CCCCTGATAG CCGAAGATGG GATGATAGGG GCACTTATCT TTTATGCGGC GGTCCCGGAC
TTCTTCGATG GGCAGGAGGT GCGGCTCCTC TCCGAACTGA CCGCAGACAT CTCCTTCGGC
CTCTCGACGA TCAAGAGTGA GCTGGAGCGG AGCAAGGCCG AAACACTGCT GCGAGAAAGC
GAGGCACGGT ACCGGGCGCT TGCCACACAC TTCCCGAACG GAGGGGTCTT CCTCTTTGAC
CATGACCTCC GATTTATGCT CGCAGACGGA AAGGACCTTC CCGCCACCGG GCTCTCGACC
GAGGAGATGA TCGGAAGGAC AGTCGATGAG GTCTTCTCCG GGGAAACGCT CGAAAATATC
CGTCCTTATT ACCTCGAAGC GCTGAATGGA AGAGAGAGCA CCTTCGAGAT GGAGTATATG
GGAGAGGTCC TTGAGGTACA TACGCTCCCG GTGCGGGACG ACAAGGGGGT GGCCACCGGG
GGGATGGCGA TGGCCCAGGT GATCACCGGC AGAAAGCAGG CCGAAGAACA TCTTCTGGGA
TTAAACCAGC GCCTTACGCA GATCATCGAG TTTCTGCCCG ACGCCACCTT TGTAATCGAC
ACCGATCAGC AGGTGATCGC CTGGAACAGG GCAATGACCG AGCTGACCGG GGTCGACGAG
TCACAGATCC TTGGAAACAG GGACCATGTC TATGCCAGTC CCTTTTATGG CGAGGACCGG
TTGATGCTGA TTGATCTGGT CGCTGGCGGG CGGAAAGGAG AACGACCACC CTTCACCCGG
TTTGAAGAGC AGGGAGACCG CCTGATAGGC GAAGCGGTGG CCCCGGCGAT CCGGCAGGGC
CGGGGCGGCT TCCTCTGGGG GATCGCCTCG CCCCTCTATG ATCGCACCGG CAGGGTGGTC
GGGGCGATCG AATCGATCCG GGATATCACC GATCGGAAAG AGCAGGAACG GGCCCTTCGC
GAGAACGAGG AACGGTACCG GTCGCTCTTC GACAATAACC CTGCGGCGAT GATGTTGATA
AAACCCACAA CCCTGGAAAT CGTCGACGCC AACCCGGCCG CCCTGAAGTT CTATGGTTAC
ACTCACGAGA GGATGACGCA CCTGCATACA ACCGATATAA CCGATATGAT CCCCTTACCC
GAACAGGATC CGCGAACCAC GATCGAACGG GCAGAAGTAC GGACCCATTA TGCCCGCCAT
CGCCTCGCTG ACGGTATGGT CAGGGAAGTT GAACTCTATT CAGGCCCGCT GATCATCCAC
GGAGAGCAGT TGCTGTACAC GATCGTCCAC GACATCACCG ACCGGATCCA GGCCGAGAAA
GCTCTGGCCG AGAGCGAGGA GAAGTTCCGG ACCCTCTTCA ACAGTACCAG CGACCTGATC
TTCCTGATTC AGGCAGACCC GGTGGAGCAC CCGATGATGA CCGAGGTGAA CCGGGCGACC
TGTGCCCGGC TCGGGTATTC CCGGGAGGAA CTGCTCGCCA TACCCTTTGA AGAGGTGCTG
GCCTCAAATT CAGAGCAGAT CAGAACCCTG CAGACCGAAC TTAGGTACTA TGGGTACATC
TCGCTCGAGT CGACGCTGGT CGGACGGACC GGGTCAAGGG TGCCGGTGGA GATCAATGTG
GTACTGATCG AACTGCAGGG CACGCAGGTC GGACTCGCCG TGGCCAGAGA CATCACAGAA
CGGCGTGAGT TGCAACAGCT CGAGAGGGCT GCACTCGAGC AGATCCAGGA AAATCTGGCA
CAGATGGCAG CGTTGAACGA TGAGATCCGG AACCCCCTGG CGGTGATCGT CGGACTAGCC
GACCTCGAAG AACCGGCATT TGCCCAGAAG ATCCTCGTCC AGGTGAAATC GATCAATGAT
CTCGTCACCC GGCTCGATCA GGGGTGGGTC GCCTCAGAGA AGGTCCGCGG GTTTCTCAGG
AAACATTACC AGATCTCATA G
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| Protein sequence | MEGKTLITVL LVDDEQDLLD IGKRSLEKTG DYSVQSATSA EEALEQIGID PPDVVVADYM
MQGADGIELL HEVRRAYPGL PFIIFTGRGT EEIVAEAYEA GADFYIQKKD MARVQFAELA
EKITRALQQR RGEERMTRLG RLNTVLQSTN HALIRIHDQV QLLSASCRIA VEDGGFIQAW
AGITDPVTGM VVPVASAGHV AGYLDRIAIS VDDIPAGRGP TGTAIRERRP VLINDIASDL
RMEPWREEAL ARGYQSSASF PLIAEDGMIG ALIFYAAVPD FFDGQEVRLL SELTADISFG
LSTIKSELER SKAETLLRES EARYRALATH FPNGGVFLFD HDLRFMLADG KDLPATGLST
EEMIGRTVDE VFSGETLENI RPYYLEALNG RESTFEMEYM GEVLEVHTLP VRDDKGVATG
GMAMAQVITG RKQAEEHLLG LNQRLTQIIE FLPDATFVID TDQQVIAWNR AMTELTGVDE
SQILGNRDHV YASPFYGEDR LMLIDLVAGG RKGERPPFTR FEEQGDRLIG EAVAPAIRQG
RGGFLWGIAS PLYDRTGRVV GAIESIRDIT DRKEQERALR ENEERYRSLF DNNPAAMMLI
KPTTLEIVDA NPAALKFYGY THERMTHLHT TDITDMIPLP EQDPRTTIER AEVRTHYARH
RLADGMVREV ELYSGPLIIH GEQLLYTIVH DITDRIQAEK ALAESEEKFR TLFNSTSDLI
FLIQADPVEH PMMTEVNRAT CARLGYSREE LLAIPFEEVL ASNSEQIRTL QTELRYYGYI
SLESTLVGRT GSRVPVEINV VLIELQGTQV GLAVARDITE RRELQQLERA ALEQIQENLA
QMAALNDEIR NPLAVIVGLA DLEEPAFAQK ILVQVKSIND LVTRLDQGWV ASEKVRGFLR
KHYQIS
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