| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1121 |
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| Symbol | |
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| ID | 5411365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 1121810 |
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| End bp | 1126351 |
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| Gene Length | 4542 bp |
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| Protein Length | 1513 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640868347 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_001404282 |
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| Protein GI | 154150664 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTCGG TCCTGTACGT GGATGACGAG TCTGCACTTC TCGAAATAAC AAAAAATGGT
ATGGAGAGAG GCGGGGAGTT TACGGTAGAC ACCGCGACAT CGGCACGGGA AGCCATCGAG
AAACTTAAAG GCAGTCGGTA CGATGCCATG GTTGCGGATT ACCTGATGCC TGAGATGGAC
GGGCTTTCCC TCCTTAAGTA CCTCCGCCCC CGCTGCAACG GGATGCCCTT TATCCTTTTT
ACCGGGAACG GCGGGGAAGA GGTTGCCGTT GAGGCGCTCA ATGCAGGCGC CGATTTTTAC
GTGCAGAAAA AAGGTTCGCC CCGTGCCCAG GTTGCGGAGC TCCAGACCCG GATCCGATCT
GCAGTTGCAC GCAGGCAGAG TGAGCGTGCC CTGAAACAAT CCGAAGAGAC ATTCCGCTCG
CTTGTGGACC AGCTCGACGA TACCGTCTTT ACTGTAAATG AAGAGGGCAT TTTTACCTAC
GTGAGCCCGG GTATCCGCAG GTTCGGCCAT GAGCCAAAAG ACCTGACGGG CCGGGACTTT
GCCCTGCTTG TTTCTGCAGA GGATATTCCT TCAGTGGCCC GCCGGCTTGG TGAAGTGAGA
AGCGGTGCGA CACCGTCCTT TGCCTTTCGA ATCGCCGGCA GGGAGGGAAA GGTTCACAGT
GTACGTGCCG TGTTCCGGCC GCGGACCGAT CACGGGCAGT TTATCGGGGC AGCCGGACAG
ATTACCGGTA TTTCCTGTGG GGAGACAGAG ACAATAAATC CCGGGGAGAG GGATTGGGAG
GAACTCTTTA CGTATGCACC GGCAGCCCAG CTGGTGCTCT CTCCCGATGG ACGTGTGACC
GGTGCCAGTC GCGCCGGGAC CGTGATGCTT GGATCCTCCC TTGAGGAGAT CACCGGGAAA
AACCTTGCGG ACTTTTTTGC ACCGGAGGAA GGGGCGCGGC TCCTTGCGTG GTTTGCAGGA
ACCGTCGGCT CGGGTACAAC CTATCAGGAG CAGTTTGTCG TCAGGCTGTC CGGAGACAAC
CATGTTATCG TATCCCTTGC CGGGGCTGCG ATCCGCGGGA GCAAAGGGGA GACATGCCGG
ATTCTTGTCA CCCTCACTGA CGTCTCCGGC CAGGAAAGAA AAGATGCAGA CCTTAAGGCA
GCCATCTCCG CTGCGGAAGC TGTGGTCACC GGGGCACGCG ACGGGATCCT TGTCTGTACT
CCGGATCGTC ATGTCAGCCG CTGGAACCCG ACCCTGGAAG ATATTACGGG TATTTCTGCA
CCGGATGCTA TCGGGAAGCC GCTTGAGGCT CTCCTGCCGT TCCTTGGGGA GACAGGAAGG
GATGCCGTCG CGCGTGCATG TACCGGGGAA ATTGTTGCAA CCCCGGATCT CCGGTACGAG
TTTCCTGCAG TGGGAAAACA GGGATGGCTA CGGGCGATCT TTTCCCCGCT CCGCACTACG
GCCGGTGCAA TAACCGGTGC CATCGGGGTC ATACAGGAAA TTACTGCACG TAAAAAGGTA
CTCCTGAAAC TTGGTACCGA CCAGAGGCTC TATGCGATCG GTGCGCAGGC AGAAACGGAT
GCCGGATCTC TCCGCGAGCT GGATCGTGTG CTTTATGAGA CCTGCAGGAA TGCTGTTGAC
GGGGATACCG TATGTACGTC CTGGATGGGT TTATTCGATC AGGCTGCCGG AATTCTCCGT
CCGGTGGCAC AGGCCGGTAC GGAAAGTGAT CTGCCAAAAG AAGGATACCC GGTTACCCGT
GAAGATCCCG CAGCATGCCC GGCATGTGAG GCGATCCTGG CGGGAAGCCC ACGCATTGTA
TCCGATATCA GCACCGATCC TGCTGCAGGA TCCTGGAAAG AGGAGGCACT CCGGAACGGG
TACCGGTCCC TGGCAGCCCT CCCGTTCCGG TTCAAAGGCG AAGTGGTAGG TGCACTGACC
CTGTGTTCCC GGGAACCGTA TGCCTTTTCC TCCGGGAATA GCGATGCGCT GGTGCATCTT
GGGTCCGTGC TTTCGTCTGC GCTCGATCTT CTCGATAAAA AAACACTCCA GCGCCGGGCC
GGAAAAGGCG GGCGCGGGAG CTGGGAACGC ACCCGGTTCC TTGCCGGGGG GATAGAATCC
GCAGCCCTCC CCTTTGCGGC AGTACATGCC GACGGGAGCA CCGGTGCGGT AAACCCGGCA
TTCTGTTCCT TCCTTGGGTA TGCCGAGGAG GAATTGATCA GGCTTCCTCT GTTGTCCGTT
CTTTCCTTTC AGGAATCAGA GAAAGACCGG TTCCTGCAGG TGCTTGCCAC GCAGAGGCCG
GACCGGTACG GGTGCATGGT CAAAAGAAAG GATGGTACTC CCGTACCAGT TGAGGTGATC
CTCCAGGCTG TTCCCGATGA GACCGGTGGG CAGCCCTGCG TAGGAATTTT CCTTGTTGAT
GTATCCGAAA AGGAGCAGAA GGCAGATTCG CTTGAAAAAG AGCGATCGAA ATACCGCACG
ATTGTAGAGG AGACTACCGC CGCGGTCGTG GTTGCCACTC CTGACGGTGA CATCCTGTAT
GCAAACCCGG CTGCCTGCAG CCTGCTTGGC CGGACCGGGC GCGAGATCTC GTTACTTGGA
GGGAAGAGGC TTACCGGTGA CGGAGATCCC CGTTTTGTCG AACTTGCGCG GCTCTGCGGG
GAATCCGGGA GGGCTGCCGG GGAACTGCGG CTGGTGCGGG GGGATGGTAC CGGGCTTGAC
GTGTATGCGG AGGCAAAAAC GTTCCCAAAG CAGAACGGCC GGCCCGCACT GATCCTTGTA
TTCCGGGATA TCACGGCAGA GAAAAAAACC GCGGACGTAC GGCTGCAGGT ACAGGAAACG
CCGTTTGCCC TTCTCGAAAG CCTTCCCTTT CCGGTGCGGC TGACCGAAAA TGAGGATGAC
TGTGCGTATT TCAACCGGGC ATGGTACGCG TTTACCGGCC GGACTCCTGA ACAGGAACGG
GGCAGCGGCT GGGAGGAGAG TGTATTTCCC GGCGATCGCG ACCGATACCG ACGGACCCCG
GGGACCGCGT CCGATCCGGA CACGCCGGTT GTATCGGAAT ACCGGCTTAT GCACCATTCC
GGCGAATACC GCCGGGTTCG TGAGACCTGC ATTCCCGGTG CAGTCCGGGA CCGAACACTC
TGCATAATTA CCGATATCCA TGCAGCCCGC CAGGCAGAGG AATCGTGCAG GTGCCAGGAA
AACCTGTACC GGGCGGTCCT TGAGACCGCG GGCGAGGCCA TACTCCTTAT CGGCGACAGG
ATTCTTGATG GCAATGATGC GGCTGCCCGG CTGTCTGGCT GCACCCGGGC AGAACTGGCC
GGGCAGGAAC CGTTTTTGTA TTCGCCCCGG GATCAGCCTG ACGGTCGGGT CTCGGTCCAG
GCCGTGCAGC AGTATCTTGC AGCAGCCCGG TTGGGAATGC ATCAGGAATT CCTTTGGACT
TTTGGGAGAG ATGGTGGTCC GTTCAGGGAA GGACAGGTCA CCCTTGTACC GGTAAACGGA
GCAAACGGGC AACTGATCCT TGCCGTTATT GCTGACAAAA CCGATCTTGG CCGGGCATTC
CGCGAGAACC AGCGTTTGTC GACATTTTCA GAACTAAATC CCTACCCGGT GATCGATGTC
GGGGCCGATC GCGTGATTGT GTACGCAAAT CCTGCAACCT TGTCTGTTCT TTGTGACTTG
GGCCTCCCGG CAAATGCGGA GACCTTCCTG CCTGCCGATT TTGATTTTAT TGCCCTGGAC
CTGAAAAAGG AGCCCGGGAA AACGGCTGAG CGCGTGGTGC AGATCAAAGA ACGCTCGTTT
TACGAGACTA TCTGCATTCC GCCGGGGCAG GATACATTCC GTATCTATAC CTATGATATC
ACCGAACGGG TCCAGGCAAC AGCGGCTCTT GAGTATGCCA ACCATAAATT AGGCATCCTC
ACAAGCATCA CCCGTCATGA CATCCAGAAC AAACTGACCG GGGTGATGGG GTACCTGGAT
CTTCTCCGGG GATCCCTGCG CGATCCCCTG CTGCTTGGCT TTCTGGATAA GGCTGAGGCC
TCGGCCGAAG CAATCCGCCA CCACATAGAG TTTACCCGGG ATTATGAATC ATTGGGCGGA
ACAGCCCCCG CCTGGCAGGA TCTTGGGCCC ATCCTTGCCG ATATCCGGTC ACACCTTGAT
GCCGGAACAA TCGCATTTGA GGAACCGGGA AGAGGATTTT CTGTTTTTGC CGATCCCATG
TTTGCCAAAG TACTCTATAA TCTCGTTGAC AATTCGCTGC GCCATGGGGT ACATGTCCGG
CGCATCCGGG TGAACGCCAT GCCGGATGAG TCCGGCGGGT GTACGCTTAC CTACGAAGAT
GATGGTGTCG GAGTCCCGCA GGACAAAAAA GAGGTCATCT TCGAACGCGG GTTTACCACG
TCGTCAGGCC CCAAAAAAAC CTCCGGGCTC GGACTGTTTT TGGTCCGGGA CATCCTTTCC
ATTACCGGTA TCATGATAAA AGAGACCGGT GTGCCCGGTT CCGGCACCCG TTTCGAGATG
TCCATTCCTC CGGGAAAATG GAGAACAGGG CCGGCAGGAT AA
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| Protein sequence | MISVLYVDDE SALLEITKNG MERGGEFTVD TATSAREAIE KLKGSRYDAM VADYLMPEMD
GLSLLKYLRP RCNGMPFILF TGNGGEEVAV EALNAGADFY VQKKGSPRAQ VAELQTRIRS
AVARRQSERA LKQSEETFRS LVDQLDDTVF TVNEEGIFTY VSPGIRRFGH EPKDLTGRDF
ALLVSAEDIP SVARRLGEVR SGATPSFAFR IAGREGKVHS VRAVFRPRTD HGQFIGAAGQ
ITGISCGETE TINPGERDWE ELFTYAPAAQ LVLSPDGRVT GASRAGTVML GSSLEEITGK
NLADFFAPEE GARLLAWFAG TVGSGTTYQE QFVVRLSGDN HVIVSLAGAA IRGSKGETCR
ILVTLTDVSG QERKDADLKA AISAAEAVVT GARDGILVCT PDRHVSRWNP TLEDITGISA
PDAIGKPLEA LLPFLGETGR DAVARACTGE IVATPDLRYE FPAVGKQGWL RAIFSPLRTT
AGAITGAIGV IQEITARKKV LLKLGTDQRL YAIGAQAETD AGSLRELDRV LYETCRNAVD
GDTVCTSWMG LFDQAAGILR PVAQAGTESD LPKEGYPVTR EDPAACPACE AILAGSPRIV
SDISTDPAAG SWKEEALRNG YRSLAALPFR FKGEVVGALT LCSREPYAFS SGNSDALVHL
GSVLSSALDL LDKKTLQRRA GKGGRGSWER TRFLAGGIES AALPFAAVHA DGSTGAVNPA
FCSFLGYAEE ELIRLPLLSV LSFQESEKDR FLQVLATQRP DRYGCMVKRK DGTPVPVEVI
LQAVPDETGG QPCVGIFLVD VSEKEQKADS LEKERSKYRT IVEETTAAVV VATPDGDILY
ANPAACSLLG RTGREISLLG GKRLTGDGDP RFVELARLCG ESGRAAGELR LVRGDGTGLD
VYAEAKTFPK QNGRPALILV FRDITAEKKT ADVRLQVQET PFALLESLPF PVRLTENEDD
CAYFNRAWYA FTGRTPEQER GSGWEESVFP GDRDRYRRTP GTASDPDTPV VSEYRLMHHS
GEYRRVRETC IPGAVRDRTL CIITDIHAAR QAEESCRCQE NLYRAVLETA GEAILLIGDR
ILDGNDAAAR LSGCTRAELA GQEPFLYSPR DQPDGRVSVQ AVQQYLAAAR LGMHQEFLWT
FGRDGGPFRE GQVTLVPVNG ANGQLILAVI ADKTDLGRAF RENQRLSTFS ELNPYPVIDV
GADRVIVYAN PATLSVLCDL GLPANAETFL PADFDFIALD LKKEPGKTAE RVVQIKERSF
YETICIPPGQ DTFRIYTYDI TERVQATAAL EYANHKLGIL TSITRHDIQN KLTGVMGYLD
LLRGSLRDPL LLGFLDKAEA SAEAIRHHIE FTRDYESLGG TAPAWQDLGP ILADIRSHLD
AGTIAFEEPG RGFSVFADPM FAKVLYNLVD NSLRHGVHVR RIRVNAMPDE SGGCTLTYED
DGVGVPQDKK EVIFERGFTT SSGPKKTSGL GLFLVRDILS ITGIMIKETG VPGSGTRFEM
SIPPGKWRTG PAG
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