Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_1167 |
Symbol | |
ID | 7270434 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | + |
Start bp | 1198748 |
End bp | 1200382 |
Gene Length | 1635 bp |
Protein Length | 544 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643569802 |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_002466232 |
Protein GI | 219851800 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [COG2205] Osmosensitive K+ channel histidine kinase |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.230477 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATATCAG TACTCTATGT AGATGACGAC CCGGCGCTGC TGGAGATCGG AAAGTTATTC CTTGAAAAGA TGGGGAATTT TTCTGTTGAA ACCTGTCTGT CGGCACTGGA AGCACTCGTT CGGCTGAAAC AGAAATCCTA CCATGCCGTG CTCTCGGATT TCGACATGCC GGAGATGAAT GGCATCCAGT TTCTCAAACA GGTTCGGGCT GATTACCCGA AACTCCCATT CGTCATCTTT ACCGGGAGGG GACGGGAGGA TGTCGTTGTT GAAGCCCTGA ATAATGGTGT GGATTTCTAC CTCCAGAAGG GTGGTGAAGC GAAGTCTCAG TTTGCTGAAC TCTCCCACAA ACTCCGTCTC GCAGTCCAGA GTCGACGATC TGAGGAACAG ATCCAGCATC TCGCTCGATT GTATGCCGTC CTCTCCAAGA CCAATGAGGC AGCGACTGGT CTTCGGGATC GAGATGCGCT GCTCGCAGAA GCATGTCGGA TCGCTGTGCA TGAGGGGGGT TTTGTGATGG TATGGGCAGG ACTCAACGAT CCCCAAACTC ACACGATTAA TCCGATCGCC CATTACAGCA TAACGGGGAA TCCCCTGCTT CCCCCGGCCG AGCCAGGTGA TGCCCTCCCG GTTGATGCCC CTCCAACGGA TATCGCATTT AGAAAAGGGC TTTATAATAT TGCTGCTGAC AACCGTGACG ATCCACGGCT TCTGGACTGG AGAGATGCAT TGCTCGCATA TGGGTTTGGT TCAAGTGCTG CATTTCCCCT TCGTTCTGGA GAGCAGGTTA TCGGAGCCAT GACATTCCAT GCCCATGAGC CGCGATTCTT CGATGAGGAG GAGGTGCAGT TGCTCATTGA ACTCACGGAT AACCTCTCTA TCGCGCTTGA ACTCATGGAG CGTGAGCAGG ATATAACTGA ACTCAAACAG ATGAGTGACA CCCTCTGGTC TGCCAATCGG AAACTGAATC TCCTCAATAA TATCATTCGT CATGACATCC TCAATACTGT GGCCGGGCTT ATTGGTCTTG AGGATATGGC GCTGGATATT ATTCAGGAAC GAGAAGTGGC AGGACTCCTG AAAGAGATCA GAGGCTCGAC TCAGAAGATC CAGCAGCAGA TAGATTTTAC CCGGGAGTAT CAGGATATCG GAGTCAAAGC CCCTCAATGG CAGAATGTAA CTGATATTGC CTCCCGGGTT GGGGAAGCCC TTGACCAGAA TGGCCTCCGG CTCGATGTCG AGTTCGGGGA TGTGGAAGTT TACGCAGATC CTCTGTTGGA GAAAGTCTTC TTCAACCTCA TGGACAATGT CATCAGGTAT GGAGTGGGTG CAACTGTTAT CAGGTTCCAC TCCCACCAAT CTGGAACGGA TCTCATCCTT TCATGTGAAG ATGACGGGGT TGGTGTGCCG GATGATGTGA AAGAACGGAT CTTCGAACAG GGATATGGAA ATAATACCGG GCAGGGATTA TTTCTGGTAC GGGAGATCCT TGCCATAACC GGGATCTCGA TCACAGAAAC AGGGGTGTAT GGACAGGGTG CCCGATTTGA TATACGTGTT CCACAGGATG GATATGGGGT ATTGAGGAGG AAAGAACCAC ACCAGAGTTC CTGCTCTTTA TCTGTGCACG AGTGA
|
Protein sequence | MISVLYVDDD PALLEIGKLF LEKMGNFSVE TCLSALEALV RLKQKSYHAV LSDFDMPEMN GIQFLKQVRA DYPKLPFVIF TGRGREDVVV EALNNGVDFY LQKGGEAKSQ FAELSHKLRL AVQSRRSEEQ IQHLARLYAV LSKTNEAATG LRDRDALLAE ACRIAVHEGG FVMVWAGLND PQTHTINPIA HYSITGNPLL PPAEPGDALP VDAPPTDIAF RKGLYNIAAD NRDDPRLLDW RDALLAYGFG SSAAFPLRSG EQVIGAMTFH AHEPRFFDEE EVQLLIELTD NLSIALELME REQDITELKQ MSDTLWSANR KLNLLNNIIR HDILNTVAGL IGLEDMALDI IQEREVAGLL KEIRGSTQKI QQQIDFTREY QDIGVKAPQW QNVTDIASRV GEALDQNGLR LDVEFGDVEV YADPLLEKVF FNLMDNVIRY GVGATVIRFH SHQSGTDLIL SCEDDGVGVP DDVKERIFEQ GYGNNTGQGL FLVREILAIT GISITETGVY GQGARFDIRV PQDGYGVLRR KEPHQSSCSL SVHE
|
| |