Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_3262 |
Symbol | |
ID | 7315490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | + |
Start bp | 3412706 |
End bp | 3414121 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643618163 |
Product | nitrogen metabolism transcriptional regulator, NtrC, Fis Family |
Protein accession | YP_002515317 |
Protein GI | 220936418 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | [TIGR01818] nitrogen regulation protein NR(I) |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAATC ACGAACACGT CTGGGTCATC GACGACGACC GATCCATTCG CTGGGTCCTG GAACGGGCCC TGGACAAGGC GGGCATCGAG GTCACCTCCT TCGAGACCGC CGGTGCCGCC CTCGATGCCC TGGAGAAGGA CACCCCCGAC GCGGTGGTGA CCGACATCCG CATGCCCGGC ATGGACGGCC TGGAACTGCT CGACCGCCTG CACCGGGATC ACCCGCAGCT TCCGGTGATC ATCATGACCG CCCACTCGGA CCTGGAGAGC GCCGTCTCCG CCTACCAGGG GGGCGCCTTC GAGTACCTGC CCAAGCCCTT CGACGTGGAC GACGCCGTGG CCCTGGTGCA CCGGGCCTGC CAGCTGCACC GGGAGCGGGC CCAGCCGGAG GCCGGACAAA GCGACCATGG CACCGAGATC ATCGGCGAGG CGCCGGCCAT GCAGGAGGTG TTCCGCGCCA TCGGCCGGCT GTCACGCTCC AACATCACCG TGCTGATCAA TGGCGAATCC GGTACCGGCA AGGAACTGGT GGCACGGGCC CTGCACCGAC ACAGCCCGCG GGCGAACATG CCCTTCATCG CCCTGAACAC CGCCGCCATC CCCAAGGACC TGCTGGAATC GGAACTCTTC GGCCACGAAA AGGGCGCCTT CACCGGCGCC CAGGCATCGC GCCGCGGCCG CTTCGAGCAG GCCGACAGCG GCACCCTGTT CCTGGACGAG ATCGGCGACA TGCCCGCGGA GCTGCAGACC CGCCTGCTGC GCGTACTGGC CGACGGCGAG TTCTACCGGG TGGGCGGCCA TACCCCCATC CGGGTGGACG TGCGCATCAT CGCCGCCACC CACCAGAACC TGGAACAGCG GGTGCGCGAG GGCCTGTTCC GCGAGGACCT GTTCCACCGC CTCAACGTGA TCCGCATCCA CGTGCCCTCC CTGCGCGAAC GCCGCGAGGA CATCCCGCTG CTGCTCAACT ATTTCCTGGG CCAGGCGGCC AAGGAACTGA ACGTGGAGCG CAAGGTGCTG CTGCCCGAGG TGCGCGATTA CCTCTCGAGT CTTGACTGGC CCGGCAACGT GCGCCAGCTG GAGAACACCT GCCGTTGGCT CACGGTCATG GCCTCCGGTC GCGAGGTGCA CCTGGACGAC CTGCCGCCGG AGTTTCGCGA CCAGCCCGAG ACCACCACCG CCGTGGGCTG GGAACAGGCC CTGGCCCAGT GGGCCGACCA GGCCCTCGCC CGTGGCGAAC ACGCCCTGCT GGAACAGGCC ATGCCCGCGT TCGAGCGCAT CATGATCCGC GCCGCCCTGA AGCGCACCGG CGGCCGTCGC CAGGACGCCG CCAAGCTGCT GGGCTGGGGC CGCAACACCC TGACGCGCAA GATCAACGAA CTGGGTATGG AAGAAGGCAA GGACGAGGAT TCATAG
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Protein sequence | MNNHEHVWVI DDDRSIRWVL ERALDKAGIE VTSFETAGAA LDALEKDTPD AVVTDIRMPG MDGLELLDRL HRDHPQLPVI IMTAHSDLES AVSAYQGGAF EYLPKPFDVD DAVALVHRAC QLHRERAQPE AGQSDHGTEI IGEAPAMQEV FRAIGRLSRS NITVLINGES GTGKELVARA LHRHSPRANM PFIALNTAAI PKDLLESELF GHEKGAFTGA QASRRGRFEQ ADSGTLFLDE IGDMPAELQT RLLRVLADGE FYRVGGHTPI RVDVRIIAAT HQNLEQRVRE GLFREDLFHR LNVIRIHVPS LRERREDIPL LLNYFLGQAA KELNVERKVL LPEVRDYLSS LDWPGNVRQL ENTCRWLTVM ASGREVHLDD LPPEFRDQPE TTTAVGWEQA LAQWADQALA RGEHALLEQA MPAFERIMIR AALKRTGGRR QDAAKLLGWG RNTLTRKINE LGMEEGKDED S
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