| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_3262 |
|---|
| Symbol | |
|---|
| ID | 7315490 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | + |
|---|
| Start bp | 3412706 |
|---|
| End bp | 3414121 |
|---|
| Gene Length | 1416 bp |
|---|
| Protein Length | 471 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643618163 |
|---|
| Product | nitrogen metabolism transcriptional regulator, NtrC, Fis Family |
|---|
| Protein accession | YP_002515317 |
|---|
| Protein GI | 220936418 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | [TIGR01818] nitrogen regulation protein NR(I) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAATC ACGAACACGT CTGGGTCATC GACGACGACC GATCCATTCG CTGGGTCCTG
GAACGGGCCC TGGACAAGGC GGGCATCGAG GTCACCTCCT TCGAGACCGC CGGTGCCGCC
CTCGATGCCC TGGAGAAGGA CACCCCCGAC GCGGTGGTGA CCGACATCCG CATGCCCGGC
ATGGACGGCC TGGAACTGCT CGACCGCCTG CACCGGGATC ACCCGCAGCT TCCGGTGATC
ATCATGACCG CCCACTCGGA CCTGGAGAGC GCCGTCTCCG CCTACCAGGG GGGCGCCTTC
GAGTACCTGC CCAAGCCCTT CGACGTGGAC GACGCCGTGG CCCTGGTGCA CCGGGCCTGC
CAGCTGCACC GGGAGCGGGC CCAGCCGGAG GCCGGACAAA GCGACCATGG CACCGAGATC
ATCGGCGAGG CGCCGGCCAT GCAGGAGGTG TTCCGCGCCA TCGGCCGGCT GTCACGCTCC
AACATCACCG TGCTGATCAA TGGCGAATCC GGTACCGGCA AGGAACTGGT GGCACGGGCC
CTGCACCGAC ACAGCCCGCG GGCGAACATG CCCTTCATCG CCCTGAACAC CGCCGCCATC
CCCAAGGACC TGCTGGAATC GGAACTCTTC GGCCACGAAA AGGGCGCCTT CACCGGCGCC
CAGGCATCGC GCCGCGGCCG CTTCGAGCAG GCCGACAGCG GCACCCTGTT CCTGGACGAG
ATCGGCGACA TGCCCGCGGA GCTGCAGACC CGCCTGCTGC GCGTACTGGC CGACGGCGAG
TTCTACCGGG TGGGCGGCCA TACCCCCATC CGGGTGGACG TGCGCATCAT CGCCGCCACC
CACCAGAACC TGGAACAGCG GGTGCGCGAG GGCCTGTTCC GCGAGGACCT GTTCCACCGC
CTCAACGTGA TCCGCATCCA CGTGCCCTCC CTGCGCGAAC GCCGCGAGGA CATCCCGCTG
CTGCTCAACT ATTTCCTGGG CCAGGCGGCC AAGGAACTGA ACGTGGAGCG CAAGGTGCTG
CTGCCCGAGG TGCGCGATTA CCTCTCGAGT CTTGACTGGC CCGGCAACGT GCGCCAGCTG
GAGAACACCT GCCGTTGGCT CACGGTCATG GCCTCCGGTC GCGAGGTGCA CCTGGACGAC
CTGCCGCCGG AGTTTCGCGA CCAGCCCGAG ACCACCACCG CCGTGGGCTG GGAACAGGCC
CTGGCCCAGT GGGCCGACCA GGCCCTCGCC CGTGGCGAAC ACGCCCTGCT GGAACAGGCC
ATGCCCGCGT TCGAGCGCAT CATGATCCGC GCCGCCCTGA AGCGCACCGG CGGCCGTCGC
CAGGACGCCG CCAAGCTGCT GGGCTGGGGC CGCAACACCC TGACGCGCAA GATCAACGAA
CTGGGTATGG AAGAAGGCAA GGACGAGGAT TCATAG
|
|---|
| Protein sequence | MNNHEHVWVI DDDRSIRWVL ERALDKAGIE VTSFETAGAA LDALEKDTPD AVVTDIRMPG
MDGLELLDRL HRDHPQLPVI IMTAHSDLES AVSAYQGGAF EYLPKPFDVD DAVALVHRAC
QLHRERAQPE AGQSDHGTEI IGEAPAMQEV FRAIGRLSRS NITVLINGES GTGKELVARA
LHRHSPRANM PFIALNTAAI PKDLLESELF GHEKGAFTGA QASRRGRFEQ ADSGTLFLDE
IGDMPAELQT RLLRVLADGE FYRVGGHTPI RVDVRIIAAT HQNLEQRVRE GLFREDLFHR
LNVIRIHVPS LRERREDIPL LLNYFLGQAA KELNVERKVL LPEVRDYLSS LDWPGNVRQL
ENTCRWLTVM ASGREVHLDD LPPEFRDQPE TTTAVGWEQA LAQWADQALA RGEHALLEQA
MPAFERIMIR AALKRTGGRR QDAAKLLGWG RNTLTRKINE LGMEEGKDED S
|
|---|
| |