More than 300 homologs were found in PanDaTox collection
for query gene Bpro_1117 on replicon NC_007948
Organism: Polaromonas sp. JS666



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007298  Daro_1804  two component, sigma54 specific, Fis family transcriptional regulator  69.46 
 
 
469 aa  639    Dechloromonas aromatica RCB  Bacteria  normal  0.0358984  normal  0.379225 
 
 
-
 
NC_007908  Rfer_2786  two component, sigma54 specific, Fis family transcriptional regulator  89.89 
 
 
477 aa  826    Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_1117  two component, sigma54 specific, Fis family transcriptional regulator  100 
 
 
466 aa  939    Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_0965  putative two component, sigma54 specific, transcriptional regulator, Fis family  83.59 
 
 
462 aa  764    Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_0872  two component, sigma54 specific, Fis family transcriptional regulator  78.87 
 
 
471 aa  743    Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0650247 
 
 
-
 
NC_008781  Pnap_3376  two component, sigma54 specific, Fis family transcriptional regulator  89.58 
 
 
462 aa  815    Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.193945  normal 
 
 
-
 
NC_011662  Tmz1t_1222  putative two component, sigma54 specific, transcriptional regulator, Fis family  66.24 
 
 
475 aa  587  1e-166  Thauera sp. MZ1T  Bacteria  normal  0.20015  n/a   
 
 
-
 
NC_007947  Mfla_0911  two component, sigma54 specific, Fis family transcriptional regulator  61.69 
 
 
456 aa  574  1.0000000000000001e-162  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_1055  two component, sigma54 specific, Fis family transcriptional regulator  61.69 
 
 
456 aa  574  1.0000000000000001e-162  Methylobacillus flagellatus KT  Bacteria  normal  0.523432  normal 
 
 
-
 
NC_007614  Nmul_A1161  two component, sigma54 specific, Fis family transcriptional regulator  62.3 
 
 
453 aa  543  1e-153  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_2494  response regulator receiver protein  61.33 
 
 
452 aa  539  9.999999999999999e-153  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_0717  two component, sigma54 specific, Fis family transcriptional regulator  58.43 
 
 
466 aa  531  1e-149  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A2763  transcriptional regulator ZraR  57.66 
 
 
445 aa  528  1e-148  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_4272  sigma-54 dependent response regulator  55.36 
 
 
457 aa  528  1e-148  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B2721  sigma-54 dependent transcriptional regulator/response regulator  57.43 
 
 
445 aa  525  1e-148  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A2938  transcriptional regulator ZraR  57.66 
 
 
445 aa  528  1e-148  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A2804  transcriptional regulatory protein ZraR  57.66 
 
 
445 aa  527  1e-148  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C2825  transcriptional regulator ZraR  57.66 
 
 
445 aa  528  1e-148  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.479389  normal 
 
 
-
 
NC_012917  PC1_3049  putative two component, sigma54 specific, transcriptional regulator, Fis family  58.13 
 
 
445 aa  521  1e-147  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_0785  Fis family two component transcriptional regulator  58.55 
 
 
456 aa  524  1e-147  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_2771  two component Fis family transcriptional regulator  60.63 
 
 
449 aa  520  1e-146  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.195731 
 
 
-
 
NC_013421  Pecwa_1226  putative two component, sigma54 specific, transcriptional regulator, Fis family  57.68 
 
 
445 aa  518  1e-146  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_0498  two component response regulator  59.81 
 
 
451 aa  516  1.0000000000000001e-145  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_3651  two component, sigma54 specific, Fis family transcriptional regulator  57.24 
 
 
445 aa  516  1.0000000000000001e-145  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_1085  putative two component, sigma54 specific, transcriptional regulator, Fis family  57.46 
 
 
445 aa  516  1.0000000000000001e-145  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3629  two-component system response regulator  56.76 
 
 
445 aa  512  1e-144  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_009708  YpsIP31758_1152  sigma-54 dependent DNA-binding response regulator  56.76 
 
 
445 aa  512  1e-144  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2768  putative two component, sigma54 specific, transcriptional regulator, Fis family  56.79 
 
 
445 aa  513  1e-144  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_1259  two component, sigma54 specific, Fis family transcriptional regulator  56.76 
 
 
445 aa  512  1e-144  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_1603  two component, sigma54 specific, Fis family transcriptional regulator  56.17 
 
 
449 aa  509  1e-143  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_3039  two component, sigma54 specific, Fis family transcriptional regulator  56.35 
 
 
445 aa  510  1e-143  Enterobacter sp. 638  Bacteria  normal  0.992832  normal  0.337936 
 
 
-
 
NC_009801  EcE24377A_2839  sigma-54 dependent response regulator  57.43 
 
 
444 aa  505  9.999999999999999e-143  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A2707  sigma-54 dependent response regulator  57.43 
 
 
444 aa  505  9.999999999999999e-143  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_2707  sigma-54 dependent response regulator  57.43 
 
 
444 aa  505  9.999999999999999e-143  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
CP001509  ECD_02446  predicted DNA-binding response regulator in two-component system  57.21 
 
 
444 aa  503  1e-141  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_1114  putative two component, sigma54 specific, transcriptional regulator, Fis family  57.21 
 
 
444 aa  503  1e-141  Escherichia coli DH1  Bacteria  normal  0.922386  n/a   
 
 
-
 
NC_002977  MCA1713  sigma-54 dependent DNA-binding response regulator  57.5 
 
 
460 aa  504  1e-141  Methylococcus capsulatus str. Bath  Bacteria  normal  0.91858  n/a   
 
 
-
 
NC_010658  SbBS512_E2919  sigma-54 dependent response regulator  57.21 
 
 
444 aa  503  1e-141  Shigella boydii CDC 3083-94  Bacteria  normal  0.70731  n/a   
 
 
-
 
NC_011353  ECH74115_3788  sigma-54 dependent response regulator  57.21 
 
 
444 aa  503  1e-141  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_012892  B21_02410  hypothetical protein  57.21 
 
 
444 aa  503  1e-141  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_1123  two component, sigma54 specific, Fis family transcriptional regulator  57.21 
 
 
444 aa  503  1e-141  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_1340  two component, sigma54 specific, Fis family transcriptional regulator  56.95 
 
 
457 aa  501  1e-140  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_2568  two component, sigma54 specific, transcriptional regulator, Fis family  57.71 
 
 
457 aa  494  9.999999999999999e-139  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.0491002  normal 
 
 
-
 
NC_011761  AFE_2955  sigma-54 dependent DNA-binding response regulator, putative  57.71 
 
 
457 aa  494  9.999999999999999e-139  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_01723  two-component system response regulator  55.19 
 
 
446 aa  487  1e-136  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_2187  two component, sigma54 specific, Fis family transcriptional regulator  52.29 
 
 
456 aa  480  1e-134  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_0608  two component, sigma54 specific, transcriptional regulator, Fis family  48.67 
 
 
461 aa  412  1e-114  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_011761  AFE_0447  sigma-54 dependent DNA-binding response regulator  48.67 
 
 
461 aa  412  1e-114  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_2292  two component, sigma54 specific, Fis family transcriptional regulator  44.52 
 
 
462 aa  382  1e-105  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_0702  two component, sigma54 specific, Fis family transcriptional regulator  41.76 
 
 
460 aa  360  4e-98  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_0198  two component, sigma54 specific, transcriptional regulator, Fis family  39.43 
 
 
461 aa  356  3.9999999999999996e-97  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0963  sigma-54 dependent DNA-binding response regulator  41.37 
 
 
467 aa  348  8e-95  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_3581  two component, sigma54 specific, Fis family transcriptional regulator  41.3 
 
 
490 aa  349  8e-95  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.0374719 
 
 
-
 
NC_009943  Dole_2401  two component, sigma54 specific, Fis family transcriptional regulator  42 
 
 
449 aa  347  2e-94  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_1869  two component, sigma54 specific, transcriptional regulator, Fis family  42.34 
 
 
464 aa  347  4e-94  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_1954  two component, sigma54 specific, transcriptional regulator, Fis family  42.34 
 
 
464 aa  345  1e-93  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.611403  n/a   
 
 
-
 
NC_009483  Gura_1428  two component, sigma-54 specific, Fis family transcriptional regulator  40.62 
 
 
460 aa  345  1e-93  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2694  two component, sigma54 specific, transcriptional regulator, Fis family  39.22 
 
 
461 aa  345  1e-93  Geobacter sp. M21  Bacteria  n/a    hitchhiker  7.62039e-17 
 
 
-
 
NC_007760  Adeh_3471  two component, sigma54 specific, Fis family transcriptional regulator  40.71 
 
 
489 aa  344  2e-93  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1522  two component, sigma54 specific, transcriptional regulator, Fis family  39.43 
 
 
461 aa  344  2e-93  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_4454  transcriptional regulatory protein ZraR  43.95 
 
 
441 aa  344  2e-93  Escherichia coli SMS-3-5  Bacteria  normal  0.209341  hitchhiker  0.000519331 
 
 
-
 
NC_011891  A2cp1_3623  two component, sigma54 specific, transcriptional regulator, Fis family  40.92 
 
 
489 aa  343  2.9999999999999997e-93  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.568637  n/a   
 
 
-
 
NC_011145  AnaeK_3555  two component, sigma54 specific, transcriptional regulator, Fis family  40.92 
 
 
489 aa  343  2.9999999999999997e-93  Anaeromyxobacter sp. K  Bacteria  normal  0.369206  n/a   
 
 
-
 
NC_010814  Glov_3076  two component, sigma54 specific, transcriptional regulator, Fis family  41.5 
 
 
454 aa  343  5e-93  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_1798  two component, sigma54 specific, Fis family transcriptional regulator  40.22 
 
 
466 aa  342  5.999999999999999e-93  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.634231  normal 
 
 
-
 
NC_009800  EcHS_A4238  transcriptional regulatory protein ZraR  44.37 
 
 
441 aa  342  5.999999999999999e-93  Escherichia coli HS  Bacteria  normal  0.020936  n/a   
 
 
-
 
NC_011080  SNSL254_A4507  transcriptional regulatory protein ZraR  44.34 
 
 
441 aa  342  7e-93  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal  0.0570238 
 
 
-
 
NC_007760  Adeh_2009  two component, sigma54 specific, Fis family transcriptional regulator  42.34 
 
 
463 aa  342  8e-93  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_0976  two component, sigma54 specific, transcriptional regulator, Fis family  42.64 
 
 
1079 aa  341  1e-92  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_0922  two component, sigma54 specific, Fis family transcriptional regulator  43.39 
 
 
462 aa  342  1e-92  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.554455  n/a   
 
 
-
 
NC_010814  Glov_2633  two component, sigma54 specific, transcriptional regulator, Fis family  40.3 
 
 
467 aa  342  1e-92  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_1430  acetoacetate metabolism regulatory protein AtoC  40.7 
 
 
461 aa  340  2e-92  Escherichia coli ATCC 8739  Bacteria  normal  0.324678  hitchhiker  0.00137179 
 
 
-
 
NC_010658  SbBS512_E4497  transcriptional regulatory protein ZraR  44.13 
 
 
441 aa  340  2e-92  Shigella boydii CDC 3083-94  Bacteria  hitchhiker  0.0000279415  n/a   
 
 
-
 
CP001509  ECD_03881  fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein  44.13 
 
 
441 aa  340  4e-92  Escherichia coli BL21(DE3)  Bacteria  normal  0.0124745  n/a   
 
 
-
 
NC_012892  B21_03834  hypothetical protein  44.13 
 
 
441 aa  340  4e-92  Escherichia coli BL21  Bacteria  normal  0.0118236  n/a   
 
 
-
 
NC_011145  AnaeK_0978  two component, sigma54 specific, transcriptional regulator, Fis family  43.01 
 
 
466 aa  340  4e-92  Anaeromyxobacter sp. K  Bacteria  normal  0.0932912  n/a   
 
 
-
 
NC_010468  EcolC_4021  transcriptional regulatory protein ZraR  44.13 
 
 
441 aa  340  4e-92  Escherichia coli ATCC 8739  Bacteria  normal  0.0128092  normal  0.0227655 
 
 
-
 
NC_009675  Anae109_4257  two component, sigma54 specific, Fis family transcriptional regulator  42.23 
 
 
463 aa  339  5e-92  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C4505  transcriptional regulatory protein ZraR  43.87 
 
 
441 aa  339  5.9999999999999996e-92  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.11324 
 
 
-
 
CP001637  EcDH1_3989  two component, sigma54 specific, transcriptional regulator, Fis family  44.13 
 
 
441 aa  339  5.9999999999999996e-92  Escherichia coli DH1  Bacteria  normal  0.716922  n/a   
 
 
-
 
NC_013173  Dbac_2984  two component, sigma54 specific, transcriptional regulator, Fis family  44.25 
 
 
458 aa  339  5.9999999999999996e-92  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.826768  n/a   
 
 
-
 
NC_009801  EcE24377A_4549  transcriptional regulatory protein ZraR  43.9 
 
 
441 aa  339  7e-92  Escherichia coli E24377A  Bacteria  hitchhiker  0.000369022  n/a   
 
 
-
 
NC_011149  SeAg_B4418  transcriptional regulatory protein ZraR  43.9 
 
 
441 aa  338  9e-92  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.298897  n/a   
 
 
-
 
CP001509  ECD_02147  fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein  40.48 
 
 
461 aa  338  1.9999999999999998e-91  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_1438  two component, sigma54 specific, transcriptional regulator, Fis family  40.48 
 
 
461 aa  338  1.9999999999999998e-91  Escherichia coli DH1  Bacteria  normal  0.445705  n/a   
 
 
-
 
NC_009675  Anae109_0965  two component, sigma54 specific, Fis family transcriptional regulator  42.32 
 
 
466 aa  337  1.9999999999999998e-91  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.605384  normal 
 
 
-
 
NC_012892  B21_02106  hypothetical protein  40.48 
 
 
461 aa  338  1.9999999999999998e-91  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A4581  transcriptional regulatory protein ZraR  43.9 
 
 
441 aa  338  1.9999999999999998e-91  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_009800  EcHS_A2361  acetoacetate metabolism regulatory protein AtoC  40.48 
 
 
461 aa  338  1.9999999999999998e-91  Escherichia coli HS  Bacteria  normal  0.18992  n/a   
 
 
-
 
NC_010498  EcSMS35_2369  acetoacetate metabolism regulatory protein AtoC  40.39 
 
 
461 aa  336  3.9999999999999995e-91  Escherichia coli SMS-3-5  Bacteria  normal  0.0790211  normal 
 
 
-
 
NC_011094  SeSA_A4385  transcriptional regulatory protein ZraR  43.66 
 
 
441 aa  337  3.9999999999999995e-91  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.712665 
 
 
-
 
NC_013385  Adeg_0173  two component, sigma54 specific, transcriptional regulator, Fis family  45.89 
 
 
463 aa  336  7e-91  Ammonifex degensii KC4  Bacteria  normal  0.127235  n/a   
 
 
-
 
NC_011353  ECH74115_5475  transcriptional regulatory protein ZraR  44 
 
 
441 aa  335  9e-91  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_0555  two component, sigma54 specific, Fis family transcriptional regulator  42.86 
 
 
457 aa  335  1e-90  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_2407  two component, sigma54 specific, Fis family transcriptional regulator  42.95 
 
 
461 aa  335  1e-90  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_2280  two component, sigma54 specific, transcriptional regulator, Fis family  41.33 
 
 
453 aa  335  1e-90  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.620123 
 
 
-
 
NC_002939  GSU2041  sigma-54 dependent DNA-binding response regulator  42.63 
 
 
455 aa  334  2e-90  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_008607  Ppro_3647  two component, sigma54 specific, Fis family transcriptional regulator  42.04 
 
 
451 aa  334  2e-90  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0168  two component, sigma54 specific, Fis family transcriptional regulator  46.84 
 
 
459 aa  334  2e-90  Desulfovibrio vulgaris DP4  Bacteria  normal  0.564625  normal  0.730975 
 
 
-
 
NC_013889  TK90_0988  two component, sigma54 specific, transcriptional regulator, Fis family  42.33 
 
 
468 aa  333  5e-90  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
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