Gene RPB_3023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3023 
Symbol 
ID3910822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3445749 
End bp3446834 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content66% 
IMG OID637884929 
Productsignal transduction histidine kinase 
Protein accessionYP_486636 
Protein GI86750140 
COG category[T] Signal transduction mechanisms 
COG ID[COG3920] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.183877 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCCTG CTGCTGCGCC GACTCTGCTG TATATCGACG ACGACGAGGC GCTCGGGCGC 
CTGGTCTCAC GCGGCCTGAA GCGACAGGGT TTCTGCGTCG AGCACGTGCT GAGCGGCGAG
GCGGGGCTGG AGCGATTGCG CAAGGGCGGC GTCGACGTGG TGGCGCTGGA TCAGTACATG
CCCGGCCTCG ACGGGCTGGA AACGCTGGAG CAGATCCAGA ACATTCCGGA TGCGCCGCCG
GTGGTCTTCG TTACCGCATC GCAGGATTCC AGCATCGCCG TGACCGCGCT GAAGGCCGGC
GCCGCGGATT ATCTGGTGAA AGATACCCAG GGCGACTTCG TCCCCCTGCT CCAGGTCGCC
GCCGATCAGG CGCTGCGCCA AGCCGTGATC CGCAAGGCCC GCGACGACGC CGAAGCCGAA
GTCCGCGCCT CGCGTGATCG CTATGCGGCG CTGGCCGCAG AGCGCGAAAT GCTGCTGCGC
GAGGTCAACC ACCGGGTCGG CAATTCGCTG CAGATCATCG CGTCGCTGCT GCATCTGCAG
GCTTCGTCCA GCAAGGAGAG CGAGGTCAAG GCGGCGCTCA CCAACGCGAT GGGCCGCGTC
GCTGCGGTGG CGCAAGTCCA CCGCCGGCTC TACACCTCGC ACGACCTCAA GAGCGTGATG
CTGAACCAGT ATCTCGAAGC GTTGCTCGAG GATTTGCGTC GTTCGGCCGA AGGCAACCGG
ATGTCGCGCC TGACGCTCGA TGCGGAGGCG GTCGAGATCG ATCCCGACCG CGCGGTCGCG
ATCGGCATCG TCGTCAACGA GTTGGTGATG AACGCGGTGA AGTACGCCTA TCCGGAAGGC
AAGGGCCCGA TCCACGTGGT GCTGAAGGCC CAGGGCGACG ACCTCGAACT CGCAATTTCC
GATGACGGCG TCGGTCTTGC GGTCAAGGCC AATCCGCACT CGACCGGCAT GGGCCAGCGC
ATCGTCAATG CGATGGCGAC CAAGCTCGAC GCCAGCGTCG AGCGCGACCC CGCGCATGCC
GGCACCCGCA TGGTGCTGCG ATTCCGCCGC ACCAACATCG CCGCGCCGAC GCCGGCCATC
GCGTAG
 
Protein sequence
MTPAAAPTLL YIDDDEALGR LVSRGLKRQG FCVEHVLSGE AGLERLRKGG VDVVALDQYM 
PGLDGLETLE QIQNIPDAPP VVFVTASQDS SIAVTALKAG AADYLVKDTQ GDFVPLLQVA
ADQALRQAVI RKARDDAEAE VRASRDRYAA LAAEREMLLR EVNHRVGNSL QIIASLLHLQ
ASSSKESEVK AALTNAMGRV AAVAQVHRRL YTSHDLKSVM LNQYLEALLE DLRRSAEGNR
MSRLTLDAEA VEIDPDRAVA IGIVVNELVM NAVKYAYPEG KGPIHVVLKA QGDDLELAIS
DDGVGLAVKA NPHSTGMGQR IVNAMATKLD ASVERDPAHA GTRMVLRFRR TNIAAPTPAI
A