| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1709 |
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| Symbol | |
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| ID | 7271272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 1773632 |
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| End bp | 1775641 |
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| Gene Length | 2010 bp |
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| Protein Length | 669 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 643570324 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_002466740 |
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| Protein GI | 219852308 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0628445 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTGTTA AAGCCGGACC AGGTTCTTCT AGGGTGGCAG AACCCCCACC ACAGATCACA
GAGCCTAGCA TACGGATCCT CTATGTTGAT GATGAACCTG AACTGCTTGA GATCGGAACA
TGGTTTCTGG AAAAGACAGG GATCTTCACA GTGACCGTCA GTTCGTCTGT TAAAGAGGGA
CTCAAGATCA TCGACAGTCA TTCATTCGAT GCGATCGTTT CTGATTATCT GATGCCCGAA
ATGGACGGCA TCGCTTTTCT CAAAGAGTTA CGGCACCGTG GTGATCAGAC CCCATTCATC
CTCTTCACAG GCCAGGGAAG AGAACAGATC GCCATCGAGG CCTACGAACA GGGGGCAGAC
CATTATGTAC AGAAAGGAGG CGACCCCCGC ACACAATTTG TTGACCTTGC TCACAAGATC
AGAGCCAGTG TTGAGAAACG TCTGATCGAA GAGAAGAACA GAGCTCTGAC CAGACGTCTC
GATTTCATGA GCCGAATCAA CAAAGCACTT GCCCGGAGTC GGGACCGTGA TGAACTGCTC
GTAGAAATCT CCGACCTTGC GATCCAATTC TGGAATTTTG AACTCTGCTG GACTGGGTTC
ATCGACCCGG AACAGAGCAT GGTGTTTCCC TATATCGCCC GCAGCAGTGA TGGACAGGTG
CCAGATATCC CCGGGATCAC CCTATCAGAT CCAAAAGAGG GAGAAGGGGA TGACCCCTGT
GGGGATGCAT TGATTCGGGG ATACCCTTAT ACCTGTAATG ATATCAGTCA TCTTCAGGTG
ATCCCCCAAT GGGGTGAATG GGCAATGACC CAGGGCTACA ACTCACTTTG TTCAGTGCCG
CTCAAATTAT ATGGAGATCT GATCGGTGCA ATTGTGTTCA TATCTCGACA GAGAGATGTC
TTTGATGGGG ATCGGATAGA GATGTTCTCT GAGATTGGAG ACGATATCTC ATTTATTTTC
AGTACCCTTG AGAGAGAGGA ACGTTCTCAT AGCACAGAGA ATACTATCAC CGCGAGTGAA
CCTCAAAACC AATCTCCAGA CAAGGACCAA CTGCTCAACC TGATCGATCA AACCACTGAT
GGGATCCTTC TGACCGACGA AGAAGGGATG ATACTCATCT GGAATCAGAG CATGGAGCGG
ATCACCGGCA TTTTAAAAAC TCAGGCACAG GGAATGCCTC TCGGGGCGAT ATATGCCTTG
CTCAACGCAG AAAATGACCC GGAAGAATAT CAGCAGATAG ATCTAATGCT CAAAGCAGGC
CCTACACCAT GGCCAGATAT ACCATGGAAG AGTACACTGA TCACTTCCGG CAGAGAGAAA
AAAGAGATTG AGACGTTCTG GTCTGTTGTT CAGACCAGTT GCGGGTTTAG AATACAGAGT
ATTGTCCGTG AAATTTTCAG GCAGTCATCA AAAAACTCAC ATCATATCCC AATGAACTCG
TATCTCCCGA CACTGATCGA TGATCTCCTT GAGGTGATCT ATACTGTGGA TAAACACGGG
ATCGTCACTA GGATCGGTTC TGCGATCGAA CGGCTCTCAT CATATTCTGC ACGGGAACTT
ATCGGTAAAG ATCTCTGTGA ACTGGCTTAT CAAAAAGATA GACTCGTCCT GAAGGCCATG
ATAATGGCAG CCATACAGAA GGATGAATCA CCAGATCTGA CCTTTAGGAT TCAGGACAGA
GATGGCACGC TCCATCACAT GAAGGGTTCG CACCACCCGC TGAACAGAAC CGGGAAGGAC
AGCGGGTTAA TCGGGATACT CTCAGAAGTG ACCACACAGA CAAAGACCTG CACTACCCTG
CAGAGAACAA CCCAAAAAGA GGATCAACTC TTTGAAGTCA TCCACCATTC CCTCCTCAAT
CAAATCACTG CCCTGAACTG CTACATTGAA CTGCTCGTCG AAGATAGCAG AGGGAAAAAT
CCGACGGATC ATTATCTGGG AAAGATCAGA GAGATCGCAT TGGCGATCCA GAATCAGGTC
TTCCAGATCA GGGATAGCCG TGAGATATAG
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| Protein sequence | MVVKAGPGSS RVAEPPPQIT EPSIRILYVD DEPELLEIGT WFLEKTGIFT VTVSSSVKEG
LKIIDSHSFD AIVSDYLMPE MDGIAFLKEL RHRGDQTPFI LFTGQGREQI AIEAYEQGAD
HYVQKGGDPR TQFVDLAHKI RASVEKRLIE EKNRALTRRL DFMSRINKAL ARSRDRDELL
VEISDLAIQF WNFELCWTGF IDPEQSMVFP YIARSSDGQV PDIPGITLSD PKEGEGDDPC
GDALIRGYPY TCNDISHLQV IPQWGEWAMT QGYNSLCSVP LKLYGDLIGA IVFISRQRDV
FDGDRIEMFS EIGDDISFIF STLEREERSH STENTITASE PQNQSPDKDQ LLNLIDQTTD
GILLTDEEGM ILIWNQSMER ITGILKTQAQ GMPLGAIYAL LNAENDPEEY QQIDLMLKAG
PTPWPDIPWK STLITSGREK KEIETFWSVV QTSCGFRIQS IVREIFRQSS KNSHHIPMNS
YLPTLIDDLL EVIYTVDKHG IVTRIGSAIE RLSSYSAREL IGKDLCELAY QKDRLVLKAM
IMAAIQKDES PDLTFRIQDR DGTLHHMKGS HHPLNRTGKD SGLIGILSEV TTQTKTCTTL
QRTTQKEDQL FEVIHHSLLN QITALNCYIE LLVEDSRGKN PTDHYLGKIR EIALAIQNQV
FQIRDSREI
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