Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_1117 |
Symbol | |
ID | 4011815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 1153679 |
End bp | 1155079 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637940794 |
Product | two component, sigma54 specific, Fis family transcriptional regulator |
Protein accession | YP_547967 |
Protein GI | 91787015 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGACT CCTCGACGAG TTCCGCCGCG ACGGCGACCC CGTCGGCCCA TCTGCTGGTC GTTGACGACG ACCCGGACAT GCTGCGCCTG CTGACGATAC GGCTCACCGC GGCGGGTTAC CGCGTGACGG CGGTCACCTC TGCAGAGGCT GCCATGACCC AGCTCCATAT CGAGCGGCCG CAGCTGGTGC TGAGCGACGT GCAGCTTCCC GGCCGGGATG GCCTGGCCCT GTTTGACGAC ATCCGCGCCC GGCATCCGTC GCTGCCGGTG ATCCTGCTGA CGGCGCATGG CACCATTCCC GATGCGGTGG AGGCGACCGA GCGAGGTGTC TTCACCTACC TGACCAAACC TTTTGATGGC AAGGGCCTGC TCGACAAGAT CGCCCAGGCG CTGGCGCTGA GCGCGCCTTC GCATCCGGCC AAGCGGGGCA GCCCCGAGGC ATGGCAACAC CAGATCATCA GCCGCTCCAG CCGCATGGCC GAAGCGCTGG CGGAAGCGCG CATGATCTCG CAATCGGATG CCAGTGTGCT GCTGCGCGGT GAAAGCGGCA CCGGCAAGGA ACTGCTGGCC CAGGCCATCC ACCAGGCCAG CCCGCGCGCC GGCAAACCCT TTATTGCCGT CAACTGCGGC GCCATCCCCG AGGCCCTGCT GGAGTCGGAA CTGTTCGGCC ACGTCAAGGG CGCCTTCACC GACGCGGTGG CCAGTCACAA GGGCTTGTTC CAGGCGGCCG ATGGCGGCAC CTTGTTGCTT GACGAGATTG GCGACATGCC GCCGGCCCTC CAGGTCAAGC TGCTGCGCGT GCTGCAGGAG CGGGTGGTGC GGCCCCTGGG CTCAAGCCAG TCCATCCCGG TGGACGTGCG CATCATCTCG GCCACGCACC GCGACCTGGA CGCCGCCATG GCCGAGGGCC AGTTCCGCGC CGATCTGTAT TACCGCCTCA ATGTGGTGAC GCTGACGCTG CCGCCGCTGT CGGAGCGCCG CGAAGACATT CCCTTGCTGG CCAACCATTT CCTCATCAAG CTGGCCAACA AGTACGACAA GCGCCTGAGC GGCTTCGCCC CGGAAGCCAT CAAGGCCCTG ACCACGGCCG CCTGGCCAGG CAATGTGCGA CAGCTCTACA ACGTGGTGGA GCAGGTCTGT GCGCTGTCGA CGACGCCGCT CGTGCCACTG GCCCTGGTGC AGCGCGCCCT GCGCTCGCCC AGTGTGCAGG TACTTACTTT TGCAGAGGCC AGGCAACGTT TTGAGCGCGA CTACCTGGTC GGCCTGCTCA AACTGACCGA TGGCAATGTG GCCGACGCCG CGCGCCTGGC CGACCGTAAC CGCACCGAGT TTTACCGCCT GATGCAAAAA CACGGCCTGA CCCCCGGGCA TTTCAAGGCC GACAACGCCA CCGCTGCCTG A
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Protein sequence | MSDSSTSSAA TATPSAHLLV VDDDPDMLRL LTIRLTAAGY RVTAVTSAEA AMTQLHIERP QLVLSDVQLP GRDGLALFDD IRARHPSLPV ILLTAHGTIP DAVEATERGV FTYLTKPFDG KGLLDKIAQA LALSAPSHPA KRGSPEAWQH QIISRSSRMA EALAEARMIS QSDASVLLRG ESGTGKELLA QAIHQASPRA GKPFIAVNCG AIPEALLESE LFGHVKGAFT DAVASHKGLF QAADGGTLLL DEIGDMPPAL QVKLLRVLQE RVVRPLGSSQ SIPVDVRIIS ATHRDLDAAM AEGQFRADLY YRLNVVTLTL PPLSERREDI PLLANHFLIK LANKYDKRLS GFAPEAIKAL TTAAWPGNVR QLYNVVEQVC ALSTTPLVPL ALVQRALRSP SVQVLTFAEA RQRFERDYLV GLLKLTDGNV ADAARLADRN RTEFYRLMQK HGLTPGHFKA DNATAA
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