Gene Bpro_1117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_1117 
Symbol 
ID4011815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp1153679 
End bp1155079 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content67% 
IMG OID637940794 
Producttwo component, sigma54 specific, Fis family transcriptional regulator 
Protein accessionYP_547967 
Protein GI91787015 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGACT CCTCGACGAG TTCCGCCGCG ACGGCGACCC CGTCGGCCCA TCTGCTGGTC 
GTTGACGACG ACCCGGACAT GCTGCGCCTG CTGACGATAC GGCTCACCGC GGCGGGTTAC
CGCGTGACGG CGGTCACCTC TGCAGAGGCT GCCATGACCC AGCTCCATAT CGAGCGGCCG
CAGCTGGTGC TGAGCGACGT GCAGCTTCCC GGCCGGGATG GCCTGGCCCT GTTTGACGAC
ATCCGCGCCC GGCATCCGTC GCTGCCGGTG ATCCTGCTGA CGGCGCATGG CACCATTCCC
GATGCGGTGG AGGCGACCGA GCGAGGTGTC TTCACCTACC TGACCAAACC TTTTGATGGC
AAGGGCCTGC TCGACAAGAT CGCCCAGGCG CTGGCGCTGA GCGCGCCTTC GCATCCGGCC
AAGCGGGGCA GCCCCGAGGC ATGGCAACAC CAGATCATCA GCCGCTCCAG CCGCATGGCC
GAAGCGCTGG CGGAAGCGCG CATGATCTCG CAATCGGATG CCAGTGTGCT GCTGCGCGGT
GAAAGCGGCA CCGGCAAGGA ACTGCTGGCC CAGGCCATCC ACCAGGCCAG CCCGCGCGCC
GGCAAACCCT TTATTGCCGT CAACTGCGGC GCCATCCCCG AGGCCCTGCT GGAGTCGGAA
CTGTTCGGCC ACGTCAAGGG CGCCTTCACC GACGCGGTGG CCAGTCACAA GGGCTTGTTC
CAGGCGGCCG ATGGCGGCAC CTTGTTGCTT GACGAGATTG GCGACATGCC GCCGGCCCTC
CAGGTCAAGC TGCTGCGCGT GCTGCAGGAG CGGGTGGTGC GGCCCCTGGG CTCAAGCCAG
TCCATCCCGG TGGACGTGCG CATCATCTCG GCCACGCACC GCGACCTGGA CGCCGCCATG
GCCGAGGGCC AGTTCCGCGC CGATCTGTAT TACCGCCTCA ATGTGGTGAC GCTGACGCTG
CCGCCGCTGT CGGAGCGCCG CGAAGACATT CCCTTGCTGG CCAACCATTT CCTCATCAAG
CTGGCCAACA AGTACGACAA GCGCCTGAGC GGCTTCGCCC CGGAAGCCAT CAAGGCCCTG
ACCACGGCCG CCTGGCCAGG CAATGTGCGA CAGCTCTACA ACGTGGTGGA GCAGGTCTGT
GCGCTGTCGA CGACGCCGCT CGTGCCACTG GCCCTGGTGC AGCGCGCCCT GCGCTCGCCC
AGTGTGCAGG TACTTACTTT TGCAGAGGCC AGGCAACGTT TTGAGCGCGA CTACCTGGTC
GGCCTGCTCA AACTGACCGA TGGCAATGTG GCCGACGCCG CGCGCCTGGC CGACCGTAAC
CGCACCGAGT TTTACCGCCT GATGCAAAAA CACGGCCTGA CCCCCGGGCA TTTCAAGGCC
GACAACGCCA CCGCTGCCTG A
 
Protein sequence
MSDSSTSSAA TATPSAHLLV VDDDPDMLRL LTIRLTAAGY RVTAVTSAEA AMTQLHIERP 
QLVLSDVQLP GRDGLALFDD IRARHPSLPV ILLTAHGTIP DAVEATERGV FTYLTKPFDG
KGLLDKIAQA LALSAPSHPA KRGSPEAWQH QIISRSSRMA EALAEARMIS QSDASVLLRG
ESGTGKELLA QAIHQASPRA GKPFIAVNCG AIPEALLESE LFGHVKGAFT DAVASHKGLF
QAADGGTLLL DEIGDMPPAL QVKLLRVLQE RVVRPLGSSQ SIPVDVRIIS ATHRDLDAAM
AEGQFRADLY YRLNVVTLTL PPLSERREDI PLLANHFLIK LANKYDKRLS GFAPEAIKAL
TTAAWPGNVR QLYNVVEQVC ALSTTPLVPL ALVQRALRSP SVQVLTFAEA RQRFERDYLV
GLLKLTDGNV ADAARLADRN RTEFYRLMQK HGLTPGHFKA DNATAA